BLASTX nr result
ID: Atropa21_contig00032004
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00032004
(762 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAA17740.1| a membrane-associated salt-inducible protein [Nic... 69 6e-16
ref|XP_006367145.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-15
ref|XP_006367146.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-15
ref|XP_006367148.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-15
ref|XP_006367149.1| PREDICTED: pentatricopeptide repeat-containi... 69 3e-15
ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containi... 65 5e-15
ref|XP_004236808.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-15
ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containi... 64 1e-14
ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containi... 63 2e-13
ref|XP_006445764.1| hypothetical protein CICLE_v10014488mg [Citr... 63 2e-13
ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containi... 63 9e-13
emb|CBI25022.3| unnamed protein product [Vitis vinifera] 63 9e-13
emb|CAN73561.1| hypothetical protein VITISV_016480 [Vitis vinifera] 63 1e-12
ref|XP_002310993.2| hypothetical protein POPTR_0008s01830g [Popu... 62 1e-12
ref|XP_002316488.2| hypothetical protein POPTR_0010s24770g [Popu... 62 7e-12
ref|XP_002515794.1| pentatricopeptide repeat-containing protein,... 58 7e-12
gb|EOY19266.1| Pentatricopeptide repeat-containing protein isofo... 57 9e-12
gb|EOY19268.1| Pentatricopeptide repeat-containing protein isofo... 57 9e-12
gb|EOY19267.1| Pentatricopeptide repeat-containing protein isofo... 57 9e-12
gb|ESW17384.1| hypothetical protein PHAVU_007G234900g [Phaseolus... 57 2e-11
>gb|AAA17740.1| a membrane-associated salt-inducible protein [Nicotiana tabacum]
Length = 435
Score = 68.6 bits (166), Expect(2) = 6e-16
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FEDVIRD LKPDVVLY NII CGM NMD ALRIVE++KK
Sbjct: 18 IFEDVIRDGLKPDVVLYNNIIRAFCGMGNMDRALRIVEQMKK 59
Score = 42.4 bits (98), Expect(2) = 6e-16
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
KKERHRP+ RTFMPI+H FAKA
Sbjct: 58 KKERHRPTSRTFMPIIHAFAKA 79
>ref|XP_006367145.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 635
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FEDVIRD LKPDVVLY NII CGM N+D ALRIVEE+KK
Sbjct: 233 IFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKK 274
Score = 40.0 bits (92), Expect(2) = 3e-15
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
KKERH P+ RTFMPI+H FAKA
Sbjct: 273 KKERHMPNSRTFMPIIHAFAKA 294
>ref|XP_006367146.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X2 [Solanum tuberosum]
gi|565403397|ref|XP_006367147.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X3 [Solanum tuberosum]
Length = 629
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FEDVIRD LKPDVVLY NII CGM N+D ALRIVEE+KK
Sbjct: 227 IFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKK 268
Score = 40.0 bits (92), Expect(2) = 3e-15
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
KKERH P+ RTFMPI+H FAKA
Sbjct: 267 KKERHMPNSRTFMPIIHAFAKA 288
>ref|XP_006367148.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X4 [Solanum tuberosum]
Length = 592
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FEDVIRD LKPDVVLY NII CGM N+D ALRIVEE+KK
Sbjct: 190 IFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKK 231
Score = 40.0 bits (92), Expect(2) = 3e-15
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
KKERH P+ RTFMPI+H FAKA
Sbjct: 230 KKERHMPNSRTFMPIIHAFAKA 251
>ref|XP_006367149.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X5 [Solanum tuberosum]
gi|565403403|ref|XP_006367150.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X6 [Solanum tuberosum]
Length = 584
Score = 68.6 bits (166), Expect(2) = 3e-15
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FEDVIRD LKPDVVLY NII CGM N+D ALRIVEE+KK
Sbjct: 182 IFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKK 223
Score = 40.0 bits (92), Expect(2) = 3e-15
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
KKERH P+ RTFMPI+H FAKA
Sbjct: 222 KKERHMPNSRTFMPIIHAFAKA 243
>ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Solanum lycopersicum]
Length = 932
Score = 65.5 bits (158), Expect(2) = 5e-15
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FEDVIRD LKPDVVLY NII CGM N++ A+RIVEE+KK
Sbjct: 524 IFEDVIRDGLKPDVVLYNNIIRAFCGMGNIERAVRIVEEMKK 565
Score = 42.4 bits (98), Expect(2) = 5e-15
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
KKERHRP+ RTFMPI+H FAKA
Sbjct: 564 KKERHRPTSRTFMPIIHAFAKA 585
>ref|XP_004236808.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Solanum lycopersicum]
Length = 877
Score = 68.6 bits (166), Expect(2) = 5e-15
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FEDVIRD LKPDVVLY NII CGM N+D ALRIVEE+KK
Sbjct: 475 IFEDVIRDGLKPDVVLYNNIIRAFCGMGNLDRALRIVEEMKK 516
Score = 39.3 bits (90), Expect(2) = 5e-15
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
KKERH P+ RTFMPI+H FAKA
Sbjct: 515 KKERHVPNSRTFMPIIHAFAKA 536
>ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Solanum tuberosum]
Length = 944
Score = 63.9 bits (154), Expect(2) = 1e-14
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FEDVIRD LKPDVVLY NII CGM N+D A+ IVEE+KK
Sbjct: 535 IFEDVIRDGLKPDVVLYNNIIRAFCGMDNIDRAVCIVEEMKK 576
Score = 42.4 bits (98), Expect(2) = 1e-14
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
KKERHRP+ RTFMPI+H FAKA
Sbjct: 575 KKERHRPTSRTFMPIIHAFAKA 596
>ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Citrus sinensis]
Length = 948
Score = 63.2 bits (152), Expect(2) = 2e-13
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
VFEDV+RD LKPDVVLY NII CGM NMD A+ IV+E++K
Sbjct: 528 VFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQK 569
Score = 39.3 bits (90), Expect(2) = 2e-13
Identities = 16/27 (59%), Positives = 24/27 (88%)
Frame = +3
Query: 297 LLRK*KKERHRPS*RTFMPIVHIFAKA 377
++++ +KERHRP+ RTFMPI+H FA+A
Sbjct: 563 IVKEMQKERHRPTSRTFMPIIHGFARA 589
>ref|XP_006445764.1| hypothetical protein CICLE_v10014488mg [Citrus clementina]
gi|567906903|ref|XP_006445765.1| hypothetical protein
CICLE_v10014488mg [Citrus clementina]
gi|557548375|gb|ESR59004.1| hypothetical protein
CICLE_v10014488mg [Citrus clementina]
gi|557548376|gb|ESR59005.1| hypothetical protein
CICLE_v10014488mg [Citrus clementina]
Length = 683
Score = 63.2 bits (152), Expect(2) = 2e-13
Identities = 29/42 (69%), Positives = 34/42 (80%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
VFEDV+RD LKPDVVLY NII CGM NMD A+ IV+E++K
Sbjct: 528 VFEDVMRDGLKPDVVLYNNIIRAFCGMGNMDRAIHIVKEMQK 569
Score = 39.3 bits (90), Expect(2) = 2e-13
Identities = 16/27 (59%), Positives = 24/27 (88%)
Frame = +3
Query: 297 LLRK*KKERHRPS*RTFMPIVHIFAKA 377
++++ +KERHRP+ RTFMPI+H FA+A
Sbjct: 563 IVKEMQKERHRPTSRTFMPIIHGFARA 589
>ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 62.8 bits (151), Expect(2) = 9e-13
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
VFEDV++D LKPDVVLY NII CGM NMD A+R V+E++K
Sbjct: 521 VFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQK 562
Score = 37.4 bits (85), Expect(2) = 9e-13
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
+KERHRP+ RTFMPI+H FA++
Sbjct: 561 QKERHRPTTRTFMPIIHGFARS 582
>emb|CBI25022.3| unnamed protein product [Vitis vinifera]
Length = 927
Score = 62.8 bits (151), Expect(2) = 9e-13
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
VFEDV++D LKPDVVLY NII CGM NMD A+R V+E++K
Sbjct: 500 VFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQK 541
Score = 37.4 bits (85), Expect(2) = 9e-13
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
+KERHRP+ RTFMPI+H FA++
Sbjct: 540 QKERHRPTTRTFMPIIHGFARS 561
>emb|CAN73561.1| hypothetical protein VITISV_016480 [Vitis vinifera]
Length = 153
Score = 62.8 bits (151), Expect(2) = 1e-12
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
VFEDV++D LKPDVVLY NII CGM NMD A+R V+E++K
Sbjct: 33 VFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQK 74
Score = 37.4 bits (85), Expect(2) = 1e-12
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +3
Query: 312 KKERHRPS*RTFMPIVHIFAKA 377
+KERHRP+ RTFMPI+H FA++
Sbjct: 73 QKERHRPTTRTFMPIIHGFARS 94
>ref|XP_002310993.2| hypothetical protein POPTR_0008s01830g [Populus trichocarpa]
gi|550332193|gb|EEE88360.2| hypothetical protein
POPTR_0008s01830g [Populus trichocarpa]
Length = 888
Score = 62.0 bits (149), Expect(2) = 1e-12
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
VFEDVI+D LKPDVVLY NII CGM NMD A+ +V+E++K
Sbjct: 505 VFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQK 546
Score = 37.7 bits (86), Expect(2) = 1e-12
Identities = 15/27 (55%), Positives = 24/27 (88%)
Frame = +3
Query: 297 LLRK*KKERHRPS*RTFMPIVHIFAKA 377
++++ +K+RHRP+ RTFMPI+H FA+A
Sbjct: 540 MVKEMQKKRHRPTSRTFMPIIHGFARA 566
>ref|XP_002316488.2| hypothetical protein POPTR_0010s24770g [Populus trichocarpa]
gi|550330544|gb|EEF02659.2| hypothetical protein
POPTR_0010s24770g [Populus trichocarpa]
Length = 947
Score = 62.0 bits (149), Expect(2) = 7e-12
Identities = 28/42 (66%), Positives = 34/42 (80%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
VFEDVI+D LKPDVVLY NII CGM NMD A+ +V+E++K
Sbjct: 526 VFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQK 567
Score = 35.0 bits (79), Expect(2) = 7e-12
Identities = 15/27 (55%), Positives = 23/27 (85%)
Frame = +3
Query: 297 LLRK*KKERHRPS*RTFMPIVHIFAKA 377
++++ +KER RP+ RTFMPI+H FA+A
Sbjct: 561 MVKEMQKERCRPTSRTFMPIIHGFARA 587
>ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545122|gb|EEF46633.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 924
Score = 57.8 bits (138), Expect(2) = 7e-12
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FEDV++D LKPDVVLY NII CGM MD A+ +V+E++K
Sbjct: 538 IFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQK 579
Score = 39.3 bits (90), Expect(2) = 7e-12
Identities = 16/27 (59%), Positives = 24/27 (88%)
Frame = +3
Query: 297 LLRK*KKERHRPS*RTFMPIVHIFAKA 377
++++ +KERHRP+ RTFMPI+H FA+A
Sbjct: 573 MVKEMQKERHRPTSRTFMPIIHGFARA 599
>gb|EOY19266.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
cacao]
Length = 944
Score = 57.4 bits (137), Expect(2) = 9e-12
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FED++ D LKPDVVLY NII CGM NMD A+ V+E+ K
Sbjct: 529 IFEDLVEDGLKPDVVLYNNIIRAFCGMGNMDRAIHTVKEMLK 570
Score = 39.3 bits (90), Expect(2) = 9e-12
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3
Query: 315 KERHRPS*RTFMPIVHIFAKA 377
KERHRP+ RTFMPI+H FA+A
Sbjct: 570 KERHRPTTRTFMPIIHAFARA 590
>gb|EOY19268.1| Pentatricopeptide repeat-containing protein isoform 3 [Theobroma
cacao]
Length = 915
Score = 57.4 bits (137), Expect(2) = 9e-12
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FED++ D LKPDVVLY NII CGM NMD A+ V+E+ K
Sbjct: 500 IFEDLVEDGLKPDVVLYNNIIRAFCGMGNMDRAIHTVKEMLK 541
Score = 39.3 bits (90), Expect(2) = 9e-12
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3
Query: 315 KERHRPS*RTFMPIVHIFAKA 377
KERHRP+ RTFMPI+H FA+A
Sbjct: 541 KERHRPTTRTFMPIIHAFARA 561
>gb|EOY19267.1| Pentatricopeptide repeat-containing protein isoform 2 [Theobroma
cacao]
Length = 781
Score = 57.4 bits (137), Expect(2) = 9e-12
Identities = 25/42 (59%), Positives = 31/42 (73%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FED++ D LKPDVVLY NII CGM NMD A+ V+E+ K
Sbjct: 529 IFEDLVEDGLKPDVVLYNNIIRAFCGMGNMDRAIHTVKEMLK 570
Score = 39.3 bits (90), Expect(2) = 9e-12
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +3
Query: 315 KERHRPS*RTFMPIVHIFAKA 377
KERHRP+ RTFMPI+H FA+A
Sbjct: 570 KERHRPTTRTFMPIIHAFARA 590
>gb|ESW17384.1| hypothetical protein PHAVU_007G234900g [Phaseolus vulgaris]
Length = 897
Score = 56.6 bits (135), Expect(2) = 2e-11
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +2
Query: 191 VFEDVIRDSLKPDVVLYTNIIGVLCGMSNMDYALRIVEEIKK 316
+FED +D LKPDVVLY NI+ CGM NMD A+++V++++K
Sbjct: 500 IFEDFTKDGLKPDVVLYNNIVTAFCGMGNMDRAIQMVKQMQK 541
Score = 38.9 bits (89), Expect(2) = 2e-11
Identities = 15/27 (55%), Positives = 24/27 (88%)
Frame = +3
Query: 297 LLRK*KKERHRPS*RTFMPIVHIFAKA 377
++++ +KERHRP+ RTF+PI+H FA+A
Sbjct: 535 MVKQMQKERHRPTTRTFLPIIHSFARA 561