BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00031753
         (627 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp...    57   3e-06

>gb|ABW81031.1| LTRGag-pol-polymerase 3 [Arabidopsis lyrata subsp. lyrata]
          Length = 1296

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 39/104 (37%), Positives = 46/104 (44%), Gaps = 26/104 (25%)
 Frame = +1

Query: 367 HPHYQRPVQAQHQH------------------PSILGHHPTQRTGQAHITLS*SAANGYS 492
           HP +  P+Q   QH                  P ILG HP+Q T  AH+      AN Y 
Sbjct: 278 HPPFYAPMQPPQQHTGYPTFGQGPFQPTNAAHPGILGPHPSQPTHAAHM------ANVYP 331

Query: 493 L--------FLPMELGHAFSSMDLQ*PDDAWYMDIGVTSHLTCN 600
                     LP  L HAF++M LQ PD  WYMD   TSH+T N
Sbjct: 332 YPTPSAPMSQLPPGLIHAFNTMTLQEPDPNWYMDSAATSHITSN 375