BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00030982
         (581 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34321.1| RNase H family protein [Solanum demissum]               62   1e-07

>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 21/182 (11%)
 Frame = -3

Query: 486  VNLHRNCGSILDNHYGSTY----QSKSVGGFIHDWWQIVGKNAFYGMMIQTIPVMI*WIL 319
            V L+ +  S L   +G T     ++ S    +  WW +   N+ + ++I T+P++I W +
Sbjct: 622  VFLNSDVASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEI 681

Query: 318  WTTRCS*KF--QSRFYGRRIE*QVFWLIKASMDKMFPLYKTEMKWPQLCETEKRKLKPIA 145
            W  RC+ K+  Q + + R +E  V+W +K S+   FP ++    W  L   +   L+P  
Sbjct: 682  WKRRCACKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFEIGNSWRDLL-NKVESLRPYP 740

Query: 144  KTGVERDSKWVY*TYRKMNFPNIE---------------*KGGITRDSSGNFVFAFVVPV 10
            K  +     W        N PNI                  G I RD +   + AF +P 
Sbjct: 741  KWKIVH---W--------NTPNINCVKINTDGSFSSGNAGLGWIVRDHTRRMIMAFSIPS 789

Query: 9    *C 4
             C
Sbjct: 790  SC 791