BLASTX nr result
ID: Atropa21_contig00030668
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00030668 (488 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004236336.1| PREDICTED: SWI/SNF complex component SNF12 h... 73 3e-14 ref|XP_006351478.1| PREDICTED: SWI/SNF complex component SNF12 h... 69 6e-13 >ref|XP_004236336.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Solanum lycopersicum] Length = 526 Score = 73.2 bits (178), Expect(2) = 3e-14 Identities = 38/64 (59%), Positives = 40/64 (62%) Frame = +1 Query: 226 MNNNNPVKNVSLSNSVPIQIPQSMPLNXXXXXXXXXXXXXXXCASHYPGHFQLSVPQRSH 405 MNNNNPVKNVSL SVPIQIPQSMP+N SH+PGHFQLS RSH Sbjct: 1 MNNNNPVKNVSLGTSVPIQIPQSMPINHNQPAVRHFSQSPAQRGSHFPGHFQLS-ESRSH 59 Query: 406 VQFQ 417 FQ Sbjct: 60 APFQ 63 Score = 30.4 bits (67), Expect(2) = 3e-14 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = +2 Query: 437 PNTATPNTASGGTRKVL 487 P +TPNTASGG RKVL Sbjct: 86 PAASTPNTASGGARKVL 102 >ref|XP_006351478.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Solanum tuberosum] Length = 526 Score = 68.9 bits (167), Expect(2) = 6e-13 Identities = 36/64 (56%), Positives = 39/64 (60%) Frame = +1 Query: 226 MNNNNPVKNVSLSNSVPIQIPQSMPLNXXXXXXXXXXXXXXXCASHYPGHFQLSVPQRSH 405 MNNNNPVKNVSL SVP+QIPQSMP+ SH+PGHFQLS RSH Sbjct: 1 MNNNNPVKNVSLGTSVPMQIPQSMPIYHNQPAARHFSQSPAQRGSHFPGHFQLS-ESRSH 59 Query: 406 VQFQ 417 FQ Sbjct: 60 APFQ 63 Score = 30.4 bits (67), Expect(2) = 6e-13 Identities = 13/17 (76%), Positives = 14/17 (82%) Frame = +2 Query: 437 PNTATPNTASGGTRKVL 487 P +TPNTASGG RKVL Sbjct: 86 PAASTPNTASGGARKVL 102