BLASTX nr result

ID: Atropa21_contig00030658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00030658
         (488 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349778.1| PREDICTED: protein IWS1 homolog A-like [Sola...    49   5e-09
ref|XP_004252877.1| PREDICTED: uncharacterized protein LOC101252...    49   1e-08

>ref|XP_006349778.1| PREDICTED: protein IWS1 homolog A-like [Solanum tuberosum]
          Length = 576

 Score = 48.9 bits (115), Expect(2) = 5e-09
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 15/67 (22%)
 Frame = +2

Query: 179 MARLGLEGFDILNDVRCSPRKRAH---------------FRNKIRNAMDIDEDYQEFLML 313
           M R GLEG DIL D+    RKRA+               F+ +IR   +IDEDY ++LML
Sbjct: 1   MVRRGLEGCDILFDISRLGRKRAYSWNKESEFENSDIFRFKRQIRKTRNIDEDYVQYLML 60

Query: 314 VLDDDNE 334
           +LD D E
Sbjct: 61  LLDYDEE 67



 Score = 37.0 bits (84), Expect(2) = 5e-09
 Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +3

Query: 339 TNEGGNEGLAVVRDKLNHXXXXXXXXXXXXXXXXXX----YNKFLANVKPKGNS 488
           TNEG  EG AV RD+ N+                      Y KFLAN KP GNS
Sbjct: 72  TNEGRKEGPAVARDRFNYDMDEDVNEYEDDEDEDEDIDPDYRKFLANAKPNGNS 125


>ref|XP_004252877.1| PREDICTED: uncharacterized protein LOC101252672 [Solanum
           lycopersicum]
          Length = 576

 Score = 48.9 bits (115), Expect(2) = 1e-08
 Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 15/67 (22%)
 Frame = +2

Query: 179 MARLGLEGFDILNDVRCSPRKRAH---------------FRNKIRNAMDIDEDYQEFLML 313
           M R GLEG DIL D+    RKRA+               F+ +IR   +IDEDY ++LML
Sbjct: 1   MVRRGLEGCDILFDISRLGRKRAYSWNKESEFENSDIFRFKRQIRKTRNIDEDYVQYLML 60

Query: 314 VLDDDNE 334
           +LD D E
Sbjct: 61  LLDYDEE 67



 Score = 35.8 bits (81), Expect(2) = 1e-08
 Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
 Frame = +3

Query: 339 TNEGGNEGLAVVRDKLN----HXXXXXXXXXXXXXXXXXXYNKFLANVKPKGNS 488
           TNEGG EG AV RD+ N                       Y KFLAN KP G S
Sbjct: 72  TNEGGKEGPAVARDRFNFDMDEDVNEYEDDEDEDEDIDPEYKKFLANTKPNGIS 125


Top