BLASTX nr result

ID: Atropa21_contig00030656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00030656
         (644 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001274826.1| prohibitin-1, mitochondrial-like [Solanum tu...    57   1e-06
ref|XP_006366299.1| PREDICTED: prohibitin-1, mitochondrial-like ...    57   5e-06
ref|XP_004248180.1| PREDICTED: prohibitin-2, mitochondrial-like ...    57   5e-06

>ref|NP_001274826.1| prohibitin-1, mitochondrial-like [Solanum tuberosum]
           gi|77416945|gb|ABA81868.1| unknown [Solanum tuberosum]
          Length = 296

 Score = 57.0 bits (136), Expect(2) = 1e-06
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -3

Query: 642 AFITLRKIEAAREIAQTISHAANKVYLSA 556
           AFITLRKIEAAREIAQTISHAANKVYLSA
Sbjct: 244 AFITLRKIEAAREIAQTISHAANKVYLSA 272



 Score = 21.9 bits (45), Expect(2) = 1e-06
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 554 MIFCSTFKT*TWIALE 507
           MI C TF+T TW   E
Sbjct: 273 MICCLTFRTSTWTLQE 288


>ref|XP_006366299.1| PREDICTED: prohibitin-1, mitochondrial-like [Solanum tuberosum]
          Length = 289

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -3

Query: 642 AFITLRKIEAAREIAQTISHAANKVYLSA 556
           AFITLRKIEAAREIAQTISHAANKVYLSA
Sbjct: 244 AFITLRKIEAAREIAQTISHAANKVYLSA 272


>ref|XP_004248180.1| PREDICTED: prohibitin-2, mitochondrial-like isoform 1 [Solanum
           lycopersicum] gi|460405435|ref|XP_004248181.1|
           PREDICTED: prohibitin-2, mitochondrial-like isoform 2
           [Solanum lycopersicum]
          Length = 289

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 29/29 (100%), Positives = 29/29 (100%)
 Frame = -3

Query: 642 AFITLRKIEAAREIAQTISHAANKVYLSA 556
           AFITLRKIEAAREIAQTISHAANKVYLSA
Sbjct: 244 AFITLRKIEAAREIAQTISHAANKVYLSA 272


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