BLASTX nr result

ID: Atropa21_contig00030615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00030615
         (526 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358197.1| PREDICTED: U6 snRNA phosphodiesterase-like [...    84   1e-14
ref|XP_004235196.1| PREDICTED: putative U6 snRNA phosphodiestera...    79   8e-13
ref|XP_004309016.1| PREDICTED: putative U6 snRNA phosphodiestera...    62   8e-08

>ref|XP_006358197.1| PREDICTED: U6 snRNA phosphodiesterase-like [Solanum tuberosum]
          Length = 285

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 39/46 (84%), Positives = 41/46 (89%)
 Frame = -1

Query: 526 RMVEEEMKKYTARSGSQQKCILTSKFSGILCKIGNKMHEICKFQEE 389
           RMVEEEMKKY   S S+QKCI TSKF+GILCKIGNKMHEICKFQEE
Sbjct: 240 RMVEEEMKKYKVGSSSRQKCIFTSKFTGILCKIGNKMHEICKFQEE 285


>ref|XP_004235196.1| PREDICTED: putative U6 snRNA phosphodiesterase-like [Solanum
           lycopersicum]
          Length = 287

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/46 (80%), Positives = 38/46 (82%)
 Frame = -1

Query: 526 RMVEEEMKKYTARSGSQQKCILTSKFSGILCKIGNKMHEICKFQEE 389
           RM EEEM KY A   S+Q CI TSKFSGILCKIGNKMHEICKFQEE
Sbjct: 242 RMAEEEMIKYKAGPSSRQNCIFTSKFSGILCKIGNKMHEICKFQEE 287


>ref|XP_004309016.1| PREDICTED: putative U6 snRNA phosphodiesterase-like [Fragaria vesca
           subsp. vesca]
          Length = 283

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = -1

Query: 526 RMVEEEMKKYTARSGSQQKCILTSKFSGILCKIGNKMHEICKFQEE 389
           ++VE+E +K T   GS QKCI TS+FSGI CKIGNK H+ICKF +E
Sbjct: 239 KVVEDERRKSTV-GGSLQKCIFTSRFSGIECKIGNKTHKICKFSDE 283


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