BLASTX nr result
ID: Atropa21_contig00030249
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00030249
(685 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352924.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 146 7e-33
ref|XP_004245927.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 146 7e-33
ref|XP_004956008.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 120 4e-25
ref|XP_004300173.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 119 9e-25
ref|XP_006415274.1| hypothetical protein EUTSA_v10007300mg [Eutr... 117 3e-24
ref|NP_174479.1| stress response suppressor 1 [Arabidopsis thali... 117 3e-24
ref|XP_002890959.1| predicted protein [Arabidopsis lyrata subsp.... 117 3e-24
ref|XP_006664976.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 117 4e-24
gb|EOY25262.1| DEAD-box ATP-dependent RNA helicase 5 isoform 4 [... 117 4e-24
gb|EOY25259.1| DEA(D/H)-box RNA helicase family protein isoform ... 117 4e-24
gb|EXC26231.1| DEAD-box ATP-dependent RNA helicase 5 [Morus nota... 116 7e-24
ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group] g... 115 1e-23
gb|EEE58128.1| hypothetical protein OsJ_09027 [Oryza sativa Japo... 115 1e-23
gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indi... 115 1e-23
dbj|BAC78594.1| RNA helicase [Oryza sativa Japonica Group] 115 1e-23
emb|CAA09197.1| RNA helicase [Arabidopsis thaliana] 115 1e-23
ref|XP_006307193.1| hypothetical protein CARUB_v10008785mg [Caps... 115 1e-23
gb|ESW30202.1| hypothetical protein PHAVU_002G133300g [Phaseolus... 114 3e-23
ref|XP_002519000.1| dead box ATP-dependent RNA helicase, putativ... 114 3e-23
ref|XP_004512453.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 114 4e-23
>ref|XP_006352924.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Solanum
tuberosum]
Length = 557
Score = 146 bits (368), Expect = 7e-33
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFTKDNKGLSGELINVLREAGQ VPAALLNFGTHVKKKESKLYGAHFREID NAPK
Sbjct: 485 VAHTFFTKDNKGLSGELINVLREAGQTVPAALLNFGTHVKKKESKLYGAHFREIDANAPK 544
Query: 183 ATKIKFGDSDNED 221
ATKIKFGDSDNED
Sbjct: 545 ATKIKFGDSDNED 557
>ref|XP_004245927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Solanum
lycopersicum]
Length = 553
Score = 146 bits (368), Expect = 7e-33
Identities = 71/73 (97%), Positives = 71/73 (97%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFTKDNKGLSGELINVLREAGQ VPAALLNFGTHVKKKESKLYGAHFREID NAPK
Sbjct: 481 VAHTFFTKDNKGLSGELINVLREAGQTVPAALLNFGTHVKKKESKLYGAHFREIDANAPK 540
Query: 183 ATKIKFGDSDNED 221
ATKIKFGDSDNED
Sbjct: 541 ATKIKFGDSDNED 553
>ref|XP_004956008.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Setaria
italica]
Length = 514
Score = 120 bits (301), Expect = 4e-25
Identities = 56/72 (77%), Positives = 65/72 (90%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT++NKGL+GEL+NVLREAGQ VP AL+ FGTHVKKKESKLYG+HF+EI +APK
Sbjct: 443 VAHTFFTQENKGLAGELVNVLREAGQVVPQALMKFGTHVKKKESKLYGSHFKEITADAPK 502
Query: 183 ATKIKFGDSDNE 218
ATKI FGDSD +
Sbjct: 503 ATKITFGDSDED 514
>ref|XP_004300173.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Fragaria
vesca subsp. vesca]
Length = 527
Score = 119 bits (298), Expect = 9e-25
Identities = 57/72 (79%), Positives = 62/72 (86%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT NKGL+GEL+NVLREAGQNVP+ LL FGTHVKKKESKLYGAHFREI +APK
Sbjct: 456 VAHTFFTHHNKGLAGELVNVLREAGQNVPSDLLKFGTHVKKKESKLYGAHFREISVDAPK 515
Query: 183 ATKIKFGDSDNE 218
A KI F DSD +
Sbjct: 516 AKKITFADSDED 527
>ref|XP_006415274.1| hypothetical protein EUTSA_v10007300mg [Eutrema salsugineum]
gi|557093045|gb|ESQ33627.1| hypothetical protein
EUTSA_v10007300mg [Eutrema salsugineum]
Length = 543
Score = 117 bits (294), Expect = 3e-24
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT+ NK L+GEL+NVLREAGQ VPA LL FGTHVKKKESKLYGAHF+EI +APK
Sbjct: 471 VAHTFFTQQNKALAGELVNVLREAGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPK 530
Query: 183 ATKIKFGDSDNED 221
ATKI F +SD+ED
Sbjct: 531 ATKITFDNSDDED 543
>ref|NP_174479.1| stress response suppressor 1 [Arabidopsis thaliana]
gi|75333350|sp|Q9C551.1|RH5_ARATH RecName: Full=DEAD-box
ATP-dependent RNA helicase 5
gi|12321302|gb|AAG50723.1|AC079041_16 p68 RNA helicase,
putative [Arabidopsis thaliana]
gi|12321459|gb|AAG50784.1|AC074309_1 RNA helicase,
putative [Arabidopsis thaliana]
gi|19347812|gb|AAL86356.1| putative p68 RNA helicase
[Arabidopsis thaliana] gi|21436171|gb|AAM51373.1|
putative p68 RNA helicase [Arabidopsis thaliana]
gi|332193302|gb|AEE31423.1| stress response suppressor 1
[Arabidopsis thaliana]
Length = 537
Score = 117 bits (294), Expect = 3e-24
Identities = 58/73 (79%), Positives = 64/73 (87%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT NKGL+GEL+NVLREAGQ VPA LL FGTHVKKKESKLYGAHF+EI +APK
Sbjct: 465 VAHTFFTPLNKGLAGELVNVLREAGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPK 524
Query: 183 ATKIKFGDSDNED 221
ATKI F +SD+ED
Sbjct: 525 ATKITFDNSDDED 537
>ref|XP_002890959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336801|gb|EFH67218.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 539
Score = 117 bits (294), Expect = 3e-24
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT+ NKGL+GEL+NVLREAGQ VP LL FGTHVKKKESKLYGAHF+EI +APK
Sbjct: 467 VAHTFFTQQNKGLAGELVNVLREAGQVVPDDLLKFGTHVKKKESKLYGAHFKEIAADAPK 526
Query: 183 ATKIKFGDSDNED 221
ATKI F +SD+ED
Sbjct: 527 ATKITFDNSDDED 539
>ref|XP_006664976.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Oryza
brachyantha]
Length = 697
Score = 117 bits (292), Expect = 4e-24
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT+DNKGL+GEL+NVLREAGQ +P AL FGTHVKKKES++YG+HF+EI +APK
Sbjct: 626 VAHTFFTQDNKGLAGELVNVLREAGQVIPPALTKFGTHVKKKESQIYGSHFKEIKADAPK 685
Query: 183 ATKIKFGDSDNE 218
+TKI FGDSD +
Sbjct: 686 STKITFGDSDED 697
>gb|EOY25262.1| DEAD-box ATP-dependent RNA helicase 5 isoform 4 [Theobroma cacao]
Length = 419
Score = 117 bits (292), Expect = 4e-24
Identities = 56/73 (76%), Positives = 64/73 (87%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT+ NKGL+GEL+NVL+EAGQ VP ALL FGTHVKKKESKLYGAHF+EI NAPK
Sbjct: 347 VAHTFFTQQNKGLAGELVNVLKEAGQIVPPALLKFGTHVKKKESKLYGAHFKEIAANAPK 406
Query: 183 ATKIKFGDSDNED 221
A KI F +SD+E+
Sbjct: 407 AKKITFDNSDDEN 419
>gb|EOY25259.1| DEA(D/H)-box RNA helicase family protein isoform 1 [Theobroma
cacao]
Length = 550
Score = 117 bits (292), Expect = 4e-24
Identities = 56/73 (76%), Positives = 64/73 (87%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT+ NKGL+GEL+NVL+EAGQ VP ALL FGTHVKKKESKLYGAHF+EI NAPK
Sbjct: 478 VAHTFFTQQNKGLAGELVNVLKEAGQIVPPALLKFGTHVKKKESKLYGAHFKEIAANAPK 537
Query: 183 ATKIKFGDSDNED 221
A KI F +SD+E+
Sbjct: 538 AKKITFDNSDDEN 550
>gb|EXC26231.1| DEAD-box ATP-dependent RNA helicase 5 [Morus notabilis]
Length = 322
Score = 116 bits (290), Expect = 7e-24
Identities = 55/72 (76%), Positives = 63/72 (87%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT+ NKGL+GEL+NVLREAGQ VP +LL FGTHVKKKESKLYGAHF+EI +APK
Sbjct: 251 VAHTFFTQQNKGLAGELVNVLREAGQIVPDSLLKFGTHVKKKESKLYGAHFKEISVDAPK 310
Query: 183 ATKIKFGDSDNE 218
+ KI F DSD+E
Sbjct: 311 SKKITFNDSDDE 322
>ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group]
gi|75325214|sp|Q6YS30.1|RH5_ORYSJ RecName: Full=DEAD-box
ATP-dependent RNA helicase 5 gi|34394349|dbj|BAC84904.1|
putative RNA helicase [Oryza sativa Japonica Group]
gi|113610960|dbj|BAF21338.1| Os07g0301200 [Oryza sativa
Japonica Group]
Length = 512
Score = 115 bits (289), Expect = 1e-23
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT++NKGL+GEL+NVLREAGQ VP AL FGTHVKKKES++YG+HF+EI +APK
Sbjct: 441 VAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPK 500
Query: 183 ATKIKFGDSDNE 218
+TKI FGDSD +
Sbjct: 501 STKITFGDSDED 512
>gb|EEE58128.1| hypothetical protein OsJ_09027 [Oryza sativa Japonica Group]
Length = 575
Score = 115 bits (289), Expect = 1e-23
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT++NKGL+GEL+NVLREAGQ VP AL FGTHVKKKES++YG+HF+EI +APK
Sbjct: 504 VAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPK 563
Query: 183 ATKIKFGDSDNE 218
+TKI FGDSD +
Sbjct: 564 STKITFGDSDED 575
>gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indica Group]
Length = 512
Score = 115 bits (289), Expect = 1e-23
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT++NKGL+GEL+NVLREAGQ VP AL FGTHVKKKES++YG+HF+EI +APK
Sbjct: 441 VAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPK 500
Query: 183 ATKIKFGDSDNE 218
+TKI FGDSD +
Sbjct: 501 STKITFGDSDED 512
>dbj|BAC78594.1| RNA helicase [Oryza sativa Japonica Group]
Length = 408
Score = 115 bits (289), Expect = 1e-23
Identities = 53/72 (73%), Positives = 64/72 (88%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT++NKGL+GEL+NVLREAGQ VP AL FGTHVKKKES++YG+HF+EI +APK
Sbjct: 337 VAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFGTHVKKKESQIYGSHFKEIKADAPK 396
Query: 183 ATKIKFGDSDNE 218
+TKI FGDSD +
Sbjct: 397 STKITFGDSDED 408
>emb|CAA09197.1| RNA helicase [Arabidopsis thaliana]
Length = 411
Score = 115 bits (289), Expect = 1e-23
Identities = 57/73 (78%), Positives = 64/73 (87%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT NKGL+GEL+NVLREAGQ VPA LL FGTHVKKKESKLYGAHF+EI +APK
Sbjct: 339 VAHTFFTPLNKGLAGELVNVLREAGQVVPADLLKFGTHVKKKESKLYGAHFKEIAADAPK 398
Query: 183 ATKIKFGDSDNED 221
ATKI F +SD+E+
Sbjct: 399 ATKITFDNSDDEN 411
>ref|XP_006307193.1| hypothetical protein CARUB_v10008785mg [Capsella rubella]
gi|482575904|gb|EOA40091.1| hypothetical protein
CARUB_v10008785mg [Capsella rubella]
Length = 543
Score = 115 bits (288), Expect = 1e-23
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT NKGL+GEL+NVL+EAGQ VPA LL FGTHVKKKESKLYGAHFREI +APK
Sbjct: 471 VAHTFFTHLNKGLAGELVNVLKEAGQVVPADLLKFGTHVKKKESKLYGAHFREIAADAPK 530
Query: 183 ATKIKFGDSDNED 221
A KI F +SD+ED
Sbjct: 531 AKKITFDNSDDED 543
>gb|ESW30202.1| hypothetical protein PHAVU_002G133300g [Phaseolus vulgaris]
Length = 537
Score = 114 bits (285), Expect = 3e-23
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT+ NKGL+GEL+NVLREAGQ VP ALL FGTHVKKKESKLYGAHF+EI +APK
Sbjct: 465 VAHTFFTQQNKGLAGELVNVLREAGQIVPDALLKFGTHVKKKESKLYGAHFKEIPVDAPK 524
Query: 183 ATKIKFGDSDNED 221
+ K F +SD+ED
Sbjct: 525 SQKKTFDNSDDED 537
>ref|XP_002519000.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223541987|gb|EEF43533.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 534
Score = 114 bits (285), Expect = 3e-23
Identities = 58/73 (79%), Positives = 63/73 (86%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT NKGL+GEL+NVLREAGQ VP ALL FGTHVKKKESKLYGAHFREI +APK
Sbjct: 463 VAHTFFTHHNKGLAGELVNVLREAGQVVPDALLKFGTHVKKKESKLYGAHFREISADAPK 522
Query: 183 ATKIKFGDSDNED 221
A KI F +SD+ED
Sbjct: 523 AKKITF-NSDDED 534
>ref|XP_004512453.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Cicer
arietinum]
Length = 526
Score = 114 bits (284), Expect = 4e-23
Identities = 55/72 (76%), Positives = 62/72 (86%)
Frame = +3
Query: 3 VAHTFFTKDNKGLSGELINVLREAGQNVPAALLNFGTHVKKKESKLYGAHFREIDTNAPK 182
VAHTFFT+ NKGLSGEL+NVLREAGQ VP ALL FGTHVKKKESKLYGAHF+EI +APK
Sbjct: 455 VAHTFFTQANKGLSGELVNVLREAGQVVPDALLKFGTHVKKKESKLYGAHFKEISADAPK 514
Query: 183 ATKIKFGDSDNE 218
+ KI F +SD +
Sbjct: 515 SKKITFDNSDED 526