BLASTX nr result

ID: Atropa21_contig00030159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00030159
         (483 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004231883.1| PREDICTED: probable cadmium/zinc-transportin...    94   2e-17
ref|XP_006339845.1| PREDICTED: probable cadmium/zinc-transportin...    93   4e-17
ref|XP_002278549.1| PREDICTED: probable cadmium/zinc-transportin...    62   6e-08
gb|EOX91553.1| Heavy metal atpase 1 [Theobroma cacao]                  62   8e-08
gb|EXB59532.1| putative cadmium/zinc-transporting ATPase HMA1 [M...    60   4e-07
ref|XP_002310116.2| hypothetical protein POPTR_0007s104801g, par...    56   4e-06

>ref|XP_004231883.1| PREDICTED: probable cadmium/zinc-transporting ATPase HMA1,
           chloroplastic-like [Solanum lycopersicum]
          Length = 821

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 45/51 (88%), Positives = 47/51 (92%)
 Frame = -1

Query: 483 TLLVCLNFVRALNLPTWSWREDISQIIDKLCSMIMFLRHGTLPSTIQTAHL 331
           TLLVCLN VRALN PTWSWREDISQIID+L S+IMFLRHGTLPSTIQ AHL
Sbjct: 771 TLLVCLNSVRALNPPTWSWREDISQIIDRLRSLIMFLRHGTLPSTIQAAHL 821


>ref|XP_006339845.1| PREDICTED: probable cadmium/zinc-transporting ATPase HMA1,
           chloroplastic-like [Solanum tuberosum]
          Length = 817

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -1

Query: 483 TLLVCLNFVRALNLPTWSWREDISQIIDKLCSMIMFLRHGTLPSTIQTAHL 331
           TLLVCLN VRALN PTWSWREDISQIID++ S++MFLRHGTLPSTIQ AHL
Sbjct: 767 TLLVCLNSVRALNPPTWSWREDISQIIDRMRSLVMFLRHGTLPSTIQAAHL 817


>ref|XP_002278549.1| PREDICTED: probable cadmium/zinc-transporting ATPase HMA1,
           chloroplastic [Vitis vinifera]
           gi|296087394|emb|CBI33768.3| unnamed protein product
           [Vitis vinifera]
          Length = 829

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = -1

Query: 483 TLLVCLNFVRALNLPTWSWREDISQIIDKLCSMIMFL-RHGTLPSTIQTAHL 331
           TLLVCLN VRALN PTWSW++D+  ++DK  S IMFL RH T  S+ + A L
Sbjct: 778 TLLVCLNSVRALNEPTWSWKQDLVPVVDKFKSTIMFLRRHTTTSSSTRAAPL 829


>gb|EOX91553.1| Heavy metal atpase 1 [Theobroma cacao]
          Length = 813

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 30/51 (58%), Positives = 36/51 (70%)
 Frame = -1

Query: 483 TLLVCLNFVRALNLPTWSWREDISQIIDKLCSMIMFLRHGTLPSTIQTAHL 331
           TLLVCLN VRALN P+WSW++D+  +I KL S +  LRH T  ST Q A L
Sbjct: 763 TLLVCLNSVRALNDPSWSWKQDLLHLISKLKSELTLLRHNTSSSTTQPAPL 813


>gb|EXB59532.1| putative cadmium/zinc-transporting ATPase HMA1 [Morus notabilis]
          Length = 830

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/52 (53%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = -1

Query: 483 TLLVCLNFVRALNLPTWSWREDISQIIDKL-CSMIMFLRHGTLPSTIQTAHL 331
           TLLVCLN +RALN PTWSWR+D   +I++L C ++ F  H T    IQ A L
Sbjct: 779 TLLVCLNSIRALNNPTWSWRQDFWHLINELKCRLVFFREHNTSAGNIQAAPL 830


>ref|XP_002310116.2| hypothetical protein POPTR_0007s104801g, partial [Populus
           trichocarpa] gi|550334580|gb|EEE90566.2| hypothetical
           protein POPTR_0007s104801g, partial [Populus
           trichocarpa]
          Length = 541

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/52 (53%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
 Frame = -1

Query: 483 TLLVCLNFVRALNLPTWSWREDISQIIDKLCSMIMFLRHG-TLPSTIQTAHL 331
           TLLVCLN +RALN P WSWR D+ Q+++KL S +M    G T  ST++ A L
Sbjct: 490 TLLVCLNSIRALNDPKWSWRYDLQQVVEKLKSRVMLKVTGDTSSSTVEAAPL 541


Top