BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00029990
         (929 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group...    51   7e-07
gb|ABA94321.1| retrotransposon protein, putative, unclassified [...    51   7e-07
emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]          51   7e-07
gb|ABA95797.1| retrotransposon protein, putative, unclassified [...    49   3e-06

>gb|AAP21414.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|108711651|gb|ABF99446.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1393

 Score = 50.8 bits (120), Expect(2) = 7e-07
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
 Frame = +3

Query: 3   EVLQVTNEYSIPL*VFGCVCSI--HTRNVGKLNPRALRCVFIGYFPIWEGQK 152
           E+L    E+ +P  VFGCVC +  H  +VGKL+P A++CVF+GY    +G K
Sbjct: 584 ELLLGKREFKVPPKVFGCVCFVRDHRPSVGKLDPHAVKCVFVGYASSQKGYK 635



 Score = 29.6 bits (65), Expect(2) = 7e-07
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 179 FISMDVTF*EFEPY 220
           F+SMDVTF EFEPY
Sbjct: 645 FVSMDVTFREFEPY 658


>gb|ABA94321.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1133

 Score = 50.8 bits (120), Expect(2) = 7e-07
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
 Frame = +3

Query: 3   EVLQVTNEYSIPL*VFGCVCSI--HTRNVGKLNPRALRCVFIGYFPIWEGQK 152
           E+L    E+ +P  VFGCVC +  H  +VGKL+P A++CVF+GY    +G K
Sbjct: 452 ELLLGKREFKVPPKVFGCVCFVRDHRPSVGKLDPHAVKCVFVGYASSQKGYK 503



 Score = 29.6 bits (65), Expect(2) = 7e-07
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 179 FISMDVTF*EFEPY 220
           F+SMDVTF EFEPY
Sbjct: 513 FVSMDVTFREFEPY 526


>emb|CAE03644.2| OSJNBa0060N03.9 [Oryza sativa Japonica Group]
          Length = 1045

 Score = 50.8 bits (120), Expect(2) = 7e-07
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
 Frame = +3

Query: 3   EVLQVTNEYSIPL*VFGCVCSI--HTRNVGKLNPRALRCVFIGYFPIWEGQK 152
           E+L    E+ +P  VFGCVC +  H  +VGKL+P A++CVF+GY    +G K
Sbjct: 621 ELLLGKREFKVPPKVFGCVCFVRDHRPSVGKLDPHAVKCVFVGYASSQKGYK 672



 Score = 29.6 bits (65), Expect(2) = 7e-07
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 179 FISMDVTF*EFEPY 220
           F+SMDVTF EFEPY
Sbjct: 682 FVSMDVTFREFEPY 695


>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1588

 Score = 48.9 bits (115), Expect(2) = 3e-06
 Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
 Frame = +3

Query: 3   EVLQVTNEYSIPL*VFGCVCSI--HTRNVGKLNPRALRCVFIGYFPIWEGQK 152
           E+L    E+ +P  VFGCVC +  H   VGKL+P A++CVF+GY    +G K
Sbjct: 772 ELLLGKREFKVPPKVFGCVCFVRDHRPFVGKLDPHAVKCVFVGYASNQKGYK 823



 Score = 29.6 bits (65), Expect(2) = 3e-06
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = +2

Query: 179 FISMDVTF*EFEPY 220
           F+SMDVTF EFEPY
Sbjct: 833 FVSMDVTFREFEPY 846