BLASTX nr result
ID: Atropa21_contig00029862
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00029862
(545 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363121.1| PREDICTED: ubiquitin receptor RAD23c-like [S... 124 1e-26
ref|XP_004232367.1| PREDICTED: putative DNA repair protein RAD23... 124 1e-26
ref|XP_006383465.1| hypothetical protein POPTR_0005s15740g [Popu... 119 4e-25
ref|XP_002329330.1| predicted protein [Populus trichocarpa] gi|5... 119 4e-25
gb|EOY04210.1| Rad23 UV excision repair protein family isoform 1... 117 2e-24
ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23... 114 1e-23
ref|XP_002305813.1| ubiquitin family protein [Populus trichocarp... 114 1e-23
ref|XP_004233496.1| PREDICTED: putative DNA repair protein RAD23... 113 3e-23
ref|XP_004233495.1| PREDICTED: putative DNA repair protein RAD23... 113 3e-23
ref|NP_001274760.1| uncharacterized protein LOC102577665 [Solanu... 113 3e-23
gb|ABB02636.1| RAD23-like [Solanum tuberosum] 113 3e-23
ref|XP_002516727.1| uv excision repair protein rad23, putative [... 113 3e-23
gb|EXB97156.1| Putative DNA repair protein RAD23-4 [Morus notabi... 113 3e-23
ref|XP_002312393.1| hypothetical protein POPTR_0008s11840g [Popu... 113 3e-23
gb|AFK43607.1| unknown [Lotus japonicus] 112 4e-23
ref|XP_006584607.1| PREDICTED: uncharacterized protein LOC100813... 112 7e-23
ref|XP_006584606.1| PREDICTED: uncharacterized protein LOC100813... 112 7e-23
ref|XP_006584605.1| PREDICTED: uncharacterized protein LOC100813... 112 7e-23
ref|XP_006584604.1| PREDICTED: uncharacterized protein LOC100813... 112 7e-23
ref|XP_006482261.1| PREDICTED: ubiquitin receptor RAD23c-like is... 112 7e-23
>ref|XP_006363121.1| PREDICTED: ubiquitin receptor RAD23c-like [Solanum tuberosum]
Length = 390
Score = 124 bits (312), Expect = 1e-26
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNPHLM+LIQEHQPDFLRLINEPVEGEGN LGQT AGA+PQAVTVTPEE
Sbjct: 288 ILQPMLQELGKQNPHLMRLIQEHQPDFLRLINEPVEGEGNVLGQT-AGAIPQAVTVTPEE 346
Query: 183 REAIERV 203
REAIER+
Sbjct: 347 REAIERL 353
>ref|XP_004232367.1| PREDICTED: putative DNA repair protein RAD23-3-like [Solanum
lycopersicum] gi|5640111|emb|CAB51544.1| RAD23 protein
[Solanum lycopersicum var. cerasiforme]
Length = 389
Score = 124 bits (312), Expect = 1e-26
Identities = 62/67 (92%), Positives = 65/67 (97%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNPHLM+LIQEHQPDFLRLINEPVEGEGN LGQT AGA+PQAVTVTPEE
Sbjct: 287 ILQPMLQELGKQNPHLMRLIQEHQPDFLRLINEPVEGEGNVLGQT-AGAIPQAVTVTPEE 345
Query: 183 REAIERV 203
REAIER+
Sbjct: 346 REAIERL 352
>ref|XP_006383465.1| hypothetical protein POPTR_0005s15740g [Populus trichocarpa]
gi|550339076|gb|ERP61262.1| hypothetical protein
POPTR_0005s15740g [Populus trichocarpa]
Length = 399
Score = 119 bits (299), Expect = 4e-25
Identities = 60/68 (88%), Positives = 64/68 (94%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNPHLM+LIQEHQPDFLRLINEPVEGEGN LGQ A+ AVPQ VTVTPEE
Sbjct: 297 ILQPMLQELGKQNPHLMRLIQEHQPDFLRLINEPVEGEGNVLGQLAS-AVPQTVTVTPEE 355
Query: 183 REAIERVV 206
REAI+R+V
Sbjct: 356 REAIDRLV 363
>ref|XP_002329330.1| predicted protein [Populus trichocarpa]
gi|566171627|ref|XP_006383464.1| ubiquitin family
protein [Populus trichocarpa]
gi|550339075|gb|ERP61261.1| ubiquitin family protein
[Populus trichocarpa]
Length = 384
Score = 119 bits (299), Expect = 4e-25
Identities = 60/68 (88%), Positives = 64/68 (94%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNPHLM+LIQEHQPDFLRLINEPVEGEGN LGQ A+ AVPQ VTVTPEE
Sbjct: 282 ILQPMLQELGKQNPHLMRLIQEHQPDFLRLINEPVEGEGNVLGQLAS-AVPQTVTVTPEE 340
Query: 183 REAIERVV 206
REAI+R+V
Sbjct: 341 REAIDRLV 348
>gb|EOY04210.1| Rad23 UV excision repair protein family isoform 1 [Theobroma cacao]
Length = 487
Score = 117 bits (293), Expect = 2e-24
Identities = 60/67 (89%), Positives = 63/67 (94%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNPHLM+LIQEHQ DFLRLINEPVEGEGN LGQ AA A+PQAVTVTPEE
Sbjct: 385 ILQPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGEGNLLGQLAA-AMPQAVTVTPEE 443
Query: 183 REAIERV 203
REAIER+
Sbjct: 444 REAIERL 450
>ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 1 [Vitis
vinifera] gi|296087286|emb|CBI33660.3| unnamed protein
product [Vitis vinifera]
Length = 381
Score = 114 bits (286), Expect = 1e-23
Identities = 57/67 (85%), Positives = 61/67 (91%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNPHLM+LIQEHQ DFLRLINEPVEGEGN LGQ G VPQAVT+TPEE
Sbjct: 280 ILQPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGEGNVLGQ--LGTVPQAVTITPEE 337
Query: 183 REAIERV 203
RE+IER+
Sbjct: 338 RESIERL 344
>ref|XP_002305813.1| ubiquitin family protein [Populus trichocarpa]
gi|222848777|gb|EEE86324.1| ubiquitin family protein
[Populus trichocarpa]
Length = 385
Score = 114 bits (285), Expect = 1e-23
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNP+LM+LIQEHQ DFLRLINEPVEGEGN LGQ A+ A+PQAVTVTPEE
Sbjct: 283 ILQPMLQELGKQNPYLMRLIQEHQADFLRLINEPVEGEGNVLGQLAS-AMPQAVTVTPEE 341
Query: 183 REAIERV 203
REAIER+
Sbjct: 342 REAIERL 348
>ref|XP_004233496.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 2
[Solanum lycopersicum]
Length = 365
Score = 113 bits (283), Expect = 3e-23
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNP LM+LIQEHQ DFLRLINEPVEGEGN GQ AGA+PQAVTVTPEE
Sbjct: 263 ILQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGEGNVPGQ-PAGAIPQAVTVTPEE 321
Query: 183 REAIERV 203
REAIER+
Sbjct: 322 REAIERL 328
>ref|XP_004233495.1| PREDICTED: putative DNA repair protein RAD23-3-like isoform 1
[Solanum lycopersicum]
Length = 383
Score = 113 bits (283), Expect = 3e-23
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNP LM+LIQEHQ DFLRLINEPVEGEGN GQ AGA+PQAVTVTPEE
Sbjct: 281 ILQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGEGNVPGQ-PAGAIPQAVTVTPEE 339
Query: 183 REAIERV 203
REAIER+
Sbjct: 340 REAIERL 346
>ref|NP_001274760.1| uncharacterized protein LOC102577665 [Solanum tuberosum]
gi|77999269|gb|ABB16981.1| unknown [Solanum tuberosum]
Length = 382
Score = 113 bits (283), Expect = 3e-23
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNP LM+LIQEHQ DFLRLINEPVEGEGN GQ AGA+PQAVTVTPEE
Sbjct: 280 ILQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGEGNVPGQ-PAGAIPQAVTVTPEE 338
Query: 183 REAIERV 203
REAIER+
Sbjct: 339 REAIERL 345
>gb|ABB02636.1| RAD23-like [Solanum tuberosum]
Length = 384
Score = 113 bits (283), Expect = 3e-23
Identities = 58/67 (86%), Positives = 61/67 (91%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNP LM+LIQEHQ DFLRLINEPVEGEGN GQ AGA+PQAVTVTPEE
Sbjct: 282 ILQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGEGNVPGQ-PAGAIPQAVTVTPEE 340
Query: 183 REAIERV 203
REAIER+
Sbjct: 341 REAIERL 347
>ref|XP_002516727.1| uv excision repair protein rad23, putative [Ricinus communis]
gi|223544100|gb|EEF45625.1| uv excision repair protein
rad23, putative [Ricinus communis]
Length = 381
Score = 113 bits (283), Expect = 3e-23
Identities = 57/67 (85%), Positives = 63/67 (94%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNPHLM+LIQEHQ DFLRLINEPVEG+GN LGQ A+ AVPQ+V+VTPEE
Sbjct: 279 ILQPMLQELGKQNPHLMRLIQEHQADFLRLINEPVEGDGNLLGQLAS-AVPQSVSVTPEE 337
Query: 183 REAIERV 203
REAIER+
Sbjct: 338 REAIERL 344
>gb|EXB97156.1| Putative DNA repair protein RAD23-4 [Morus notabilis]
Length = 550
Score = 113 bits (282), Expect = 3e-23
Identities = 58/67 (86%), Positives = 62/67 (92%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVEGEGNALGQTAAGAVPQAVTVTPEE 182
ILQPMLQELGKQNP LM+LIQEHQ DFLRLINEPVEGEGN LGQ +A A+PQAVTVTPEE
Sbjct: 446 ILQPMLQELGKQNPQLMRLIQEHQADFLRLINEPVEGEGNLLGQLSA-AMPQAVTVTPEE 504
Query: 183 REAIERV 203
REAIER+
Sbjct: 505 REAIERL 511
>ref|XP_002312393.1| hypothetical protein POPTR_0008s11840g [Populus trichocarpa]
gi|222852213|gb|EEE89760.1| hypothetical protein
POPTR_0008s11840g [Populus trichocarpa]
Length = 333
Score = 113 bits (282), Expect = 3e-23
Identities = 60/68 (88%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVE-GEGNALGQTAAGAVPQAVTVTPE 179
ILQPMLQELGKQNPHLM+LIQEHQ DFLRLINEPVE GEGN LGQ AA A+PQAVTVTPE
Sbjct: 232 ILQPMLQELGKQNPHLMRLIQEHQDDFLRLINEPVESGEGNVLGQLAA-AMPQAVTVTPE 290
Query: 180 EREAIERV 203
EREAIER+
Sbjct: 291 EREAIERL 298
>gb|AFK43607.1| unknown [Lotus japonicus]
Length = 228
Score = 112 bits (281), Expect = 4e-23
Identities = 57/68 (83%), Positives = 62/68 (91%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVE-GEGNALGQTAAGAVPQAVTVTPE 179
ILQPMLQELGKQNPHLM+LIQ+HQ DFLRLINEPVE GEGN LGQ A A+PQAV+VTPE
Sbjct: 123 ILQPMLQELGKQNPHLMRLIQDHQVDFLRLINEPVEGGEGNILGQPAGAAMPQAVSVTPE 182
Query: 180 EREAIERV 203
EREAIER+
Sbjct: 183 EREAIERL 190
>ref|XP_006584607.1| PREDICTED: uncharacterized protein LOC100813881 isoform X4 [Glycine
max]
Length = 383
Score = 112 bits (279), Expect = 7e-23
Identities = 59/68 (86%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVE-GEGNALGQTAAGAVPQAVTVTPE 179
ILQPMLQELGKQNPHLM+LIQEHQ DFLRLINEPVE GEGN LGQ AGA+PQAVTVTPE
Sbjct: 280 ILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQ-LAGAMPQAVTVTPE 338
Query: 180 EREAIERV 203
ER+AIER+
Sbjct: 339 ERQAIERL 346
>ref|XP_006584606.1| PREDICTED: uncharacterized protein LOC100813881 isoform X3 [Glycine
max]
Length = 401
Score = 112 bits (279), Expect = 7e-23
Identities = 59/68 (86%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVE-GEGNALGQTAAGAVPQAVTVTPE 179
ILQPMLQELGKQNPHLM+LIQEHQ DFLRLINEPVE GEGN LGQ AGA+PQAVTVTPE
Sbjct: 298 ILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQ-LAGAMPQAVTVTPE 356
Query: 180 EREAIERV 203
ER+AIER+
Sbjct: 357 ERQAIERL 364
>ref|XP_006584605.1| PREDICTED: uncharacterized protein LOC100813881 isoform X2 [Glycine
max]
Length = 468
Score = 112 bits (279), Expect = 7e-23
Identities = 59/68 (86%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVE-GEGNALGQTAAGAVPQAVTVTPE 179
ILQPMLQELGKQNPHLM+LIQEHQ DFLRLINEPVE GEGN LGQ AGA+PQAVTVTPE
Sbjct: 365 ILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQ-LAGAMPQAVTVTPE 423
Query: 180 EREAIERV 203
ER+AIER+
Sbjct: 424 ERQAIERL 431
>ref|XP_006584604.1| PREDICTED: uncharacterized protein LOC100813881 isoform X1 [Glycine
max]
Length = 469
Score = 112 bits (279), Expect = 7e-23
Identities = 59/68 (86%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVE-GEGNALGQTAAGAVPQAVTVTPE 179
ILQPMLQELGKQNPHLM+LIQEHQ DFLRLINEPVE GEGN LGQ AGA+PQAVTVTPE
Sbjct: 366 ILQPMLQELGKQNPHLMRLIQEHQVDFLRLINEPVEGGEGNILGQ-LAGAMPQAVTVTPE 424
Query: 180 EREAIERV 203
ER+AIER+
Sbjct: 425 ERQAIERL 432
>ref|XP_006482261.1| PREDICTED: ubiquitin receptor RAD23c-like isoform X2 [Citrus
sinensis]
Length = 396
Score = 112 bits (279), Expect = 7e-23
Identities = 59/68 (86%), Positives = 63/68 (92%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 ILQPMLQELGKQNPHLMQLIQEHQPDFLRLINEPVE-GEGNALGQTAAGAVPQAVTVTPE 179
ILQPMLQELGKQNPHLM+LIQEHQ DFLRLINEPVE GEGN LGQ A+ A+PQAVTVTPE
Sbjct: 293 ILQPMLQELGKQNPHLMRLIQEHQTDFLRLINEPVEGGEGNVLGQLAS-AMPQAVTVTPE 351
Query: 180 EREAIERV 203
EREAIER+
Sbjct: 352 EREAIERL 359