BLASTX nr result
ID: Atropa21_contig00029742
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00029742
(843 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004232338.1| PREDICTED: putative pentatricopeptide repeat... 82 2e-13
ref|XP_006357835.1| PREDICTED: putative pentatricopeptide repeat... 82 2e-13
ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578... 77 8e-12
ref|XP_006357833.1| PREDICTED: uncharacterized protein LOC102584... 63 9e-12
ref|XP_006584420.1| PREDICTED: uncharacterized protein LOC102664... 70 1e-09
ref|XP_004514168.1| PREDICTED: uncharacterized protein LOC101515... 68 4e-09
ref|XP_006605005.1| PREDICTED: uncharacterized protein LOC102669... 67 6e-09
ref|XP_006605008.1| PREDICTED: uncharacterized protein LOC102670... 67 8e-09
ref|XP_004232336.1| PREDICTED: uncharacterized protein LOC101262... 53 2e-08
ref|XP_006576055.1| PREDICTED: uncharacterized protein LOC100795... 65 3e-08
ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat... 64 9e-08
ref|XP_003612776.1| hypothetical protein MTR_5g028890 [Medicago ... 55 2e-07
ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat... 61 4e-07
>ref|XP_004232338.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like isoform 1 [Solanum lycopersicum]
gi|460373057|ref|XP_004232339.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform 2 [Solanum lycopersicum]
Length = 460
Score = 82.4 bits (202), Expect = 2e-13
Identities = 39/42 (92%), Positives = 42/42 (100%)
Frame = -1
Query: 843 RGGMRILKSDKRIVIDGLRSCGLSHEARKVQSRIQLAKLLHY 718
RGGMRILKSDKRIVIDGLRSCGL+HEARKVQS+IQ+AKLLHY
Sbjct: 419 RGGMRILKSDKRIVIDGLRSCGLTHEARKVQSKIQMAKLLHY 460
>ref|XP_006357835.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like isoform X1 [Solanum tuberosum]
gi|565383043|ref|XP_006357836.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X2 [Solanum tuberosum]
gi|565383045|ref|XP_006357837.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X3 [Solanum tuberosum]
Length = 460
Score = 82.0 bits (201), Expect = 2e-13
Identities = 38/42 (90%), Positives = 42/42 (100%)
Frame = -1
Query: 843 RGGMRILKSDKRIVIDGLRSCGLSHEARKVQSRIQLAKLLHY 718
RGGMRILKSDKRIV+DGLRSCGL+HEARKVQS+IQ+AKLLHY
Sbjct: 419 RGGMRILKSDKRIVVDGLRSCGLTHEARKVQSKIQMAKLLHY 460
>ref|XP_006343535.1| PREDICTED: uncharacterized protein LOC102578284 [Solanum tuberosum]
Length = 614
Score = 77.0 bits (188), Expect = 8e-12
Identities = 40/75 (53%), Positives = 48/75 (64%)
Frame = -3
Query: 268 NNWARPRPPPTISKQAQQQQPGILRPLPSQWQQAHSIEATPTDI*AVMHTLGLTPPDPNW 89
N+WA+P Q Q+ P IL P QQA++ TPTDI MHTLG+TPPD NW
Sbjct: 329 NSWAKPN-----YGQQQKPHPHILGTRP---QQAYTTAPTPTDIEVAMHTLGITPPDANW 380
Query: 88 YMNIGDTSHMTSSQG 44
YM+ G TSHMTS+QG
Sbjct: 381 YMDTGATSHMTSAQG 395
>ref|XP_006357833.1| PREDICTED: uncharacterized protein LOC102584663 [Solanum tuberosum]
Length = 304
Score = 63.2 bits (152), Expect(2) = 9e-12
Identities = 34/60 (56%), Positives = 40/60 (66%)
Frame = -1
Query: 519 RQMIAFGDSLPDADGSSIKLTRKHRRQFLLRLLDTVALSPREELPTGAA*PSMSSYRHTE 340
RQ+I GDSLPDA S + +KHRRQ LL + DT SP EELP PSMSSY++TE
Sbjct: 128 RQIITDGDSLPDALDDSTRTNKKHRRQSLLIVQDTHTPSPMEELPKRPEQPSMSSYKYTE 187
Score = 33.9 bits (76), Expect(2) = 9e-12
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -3
Query: 340 GDDATDICPGTCIFQDLVQ 284
GD A DI P +CIFQDLVQ
Sbjct: 199 GDSAADISPASCIFQDLVQ 217
>ref|XP_006584420.1| PREDICTED: uncharacterized protein LOC102664358 [Glycine max]
Length = 281
Score = 69.7 bits (169), Expect = 1e-09
Identities = 38/73 (52%), Positives = 44/73 (60%)
Frame = -3
Query: 262 WARPRPPPTISKQAQQQQPGILRPLPSQWQQAHSIEATPTDI*AVMHTLGLTPPDPNWYM 83
W RP +Q +QQPGIL P Q A + TPT I A MHTL +TPPD NWYM
Sbjct: 188 WVRPN-----YQQTPRQQPGILGSRPQQAYTATT--PTPTGIEAAMHTLDITPPDLNWYM 240
Query: 82 NIGDTSHMTSSQG 44
+ G TSHMTS+ G
Sbjct: 241 DTGATSHMTSTSG 253
>ref|XP_004514168.1| PREDICTED: uncharacterized protein LOC101515410 [Cicer arietinum]
Length = 909
Score = 68.2 bits (165), Expect = 4e-09
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = -3
Query: 268 NNWARPRPPPTISKQAQQQQPGILRPLPSQWQQAHSIEATPTDI*AVMHTLGLTPPDPNW 89
+ W RP PP +Q G+L P P + A + PT+I A MHT+ L PPD W
Sbjct: 316 SQWTRPNGPP--------KQQGLLGPHPQAYA-ASTPSLAPTNIEAAMHTMSLNPPDGQW 366
Query: 88 YMNIGDTSHMTSSQG 44
YM+IG TSHMT+SQG
Sbjct: 367 YMDIGATSHMTASQG 381
Score = 68.2 bits (165), Expect = 4e-09
Identities = 35/75 (46%), Positives = 44/75 (58%)
Frame = -3
Query: 268 NNWARPRPPPTISKQAQQQQPGILRPLPSQWQQAHSIEATPTDI*AVMHTLGLTPPDPNW 89
+ W RP PP +Q G+L P P + A + PT+I A MHT+ L PPD W
Sbjct: 763 SQWTRPNGPP--------KQQGLLGPHPQAYA-ASTPSLAPTNIEAAMHTMSLNPPDGQW 813
Query: 88 YMNIGDTSHMTSSQG 44
YM+IG TSHMT+SQG
Sbjct: 814 YMDIGATSHMTASQG 828
>ref|XP_006605005.1| PREDICTED: uncharacterized protein LOC102669234 [Glycine max]
Length = 922
Score = 67.4 bits (163), Expect = 6e-09
Identities = 40/74 (54%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = -3
Query: 262 WARPRPPPTISKQAQQQQPGILRPLPSQWQQAHSIEA-TPTDI*AVMHTLGLTPPDPNWY 86
WARP +Q QQP IL P QQA+ A T TDI A MHTLG+T P PNWY
Sbjct: 256 WARPN-----YQQPPHQQPSILGSRP---QQAYITTAPTLTDIEAAMHTLGITSPYPNWY 307
Query: 85 MNIGDTSHMTSSQG 44
M+ G TSHMTS+ G
Sbjct: 308 MDTGATSHMTSTSG 321
>ref|XP_006605008.1| PREDICTED: uncharacterized protein LOC102670172 [Glycine max]
Length = 363
Score = 67.0 bits (162), Expect = 8e-09
Identities = 38/72 (52%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = -3
Query: 262 WARPRPPPTISKQAQQQQPGILRPLPSQWQQAHSIEA-TPTDI*AVMHTLGLTPPDPNWY 86
W RP +Q +QQPGIL P QQA++ A T TDI A MHTLG+T P+PNWY
Sbjct: 218 WVRPN-----YQQPPRQQPGILGSRP---QQAYTATAPTRTDIEAAMHTLGITSPNPNWY 269
Query: 85 MNIGDTSHMTSS 50
M+ TSHMTS+
Sbjct: 270 MDTSATSHMTST 281
>ref|XP_004232336.1| PREDICTED: uncharacterized protein LOC101262580 [Solanum
lycopersicum]
Length = 304
Score = 52.8 bits (125), Expect(2) = 2e-08
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = -1
Query: 522 NRQMIAFGDSLPDADGSSIKLTRKHRRQFLLRLLDTVALSPREELPTGAA*PSMSSYRHT 343
+RQ+I GD LPDA S +KH RQ LL + DT SP EELP PS SSY++T
Sbjct: 127 SRQIITDGDFLPDALDDSTITNKKHFRQSLLIVQDTHTPSPMEELPNRPEQPSTSSYKYT 186
Query: 342 E 340
+
Sbjct: 187 K 187
Score = 33.1 bits (74), Expect(2) = 2e-08
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -3
Query: 340 GDDATDICPGTCIFQDLVQ 284
GD A DI P CIFQDLVQ
Sbjct: 199 GDSAADISPALCIFQDLVQ 217
>ref|XP_006576055.1| PREDICTED: uncharacterized protein LOC100795603 [Glycine max]
Length = 210
Score = 65.1 bits (157), Expect = 3e-08
Identities = 35/71 (49%), Positives = 43/71 (60%)
Frame = -3
Query: 262 WARPRPPPTISKQAQQQQPGILRPLPSQWQQAHSIEATPTDI*AVMHTLGLTPPDPNWYM 83
WARP +Q ++QPG+L P Q A + TPTDI A MHTL +T PDPNWYM
Sbjct: 117 WARPN-----YQQPPRRQPGVLGSRPQQAYTATT--PTPTDIEAAMHTLDITSPDPNWYM 169
Query: 82 NIGDTSHMTSS 50
+ T HMTS+
Sbjct: 170 DTDATFHMTST 180
>ref|XP_006348886.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Solanum tuberosum]
Length = 460
Score = 63.5 bits (153), Expect = 9e-08
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = -1
Query: 843 RGGMRILKSDKRIVIDGLRSCGLSHEARKVQSRIQLAKLLH 721
RGGMRILKSDKR VIDGLR G S EARKVQS+I+LA +LH
Sbjct: 419 RGGMRILKSDKRGVIDGLRGSGYSQEARKVQSKIRLATILH 459
>ref|XP_003612776.1| hypothetical protein MTR_5g028890 [Medicago truncatula]
gi|355514111|gb|AES95734.1| hypothetical protein
MTR_5g028890 [Medicago truncatula]
Length = 175
Score = 55.5 bits (132), Expect(2) = 2e-07
Identities = 29/53 (54%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -3
Query: 193 PLPSQWQQAHSIEA----TPTDI*AVMHTLGLTPPDPNWYMNIGDTSHMTSSQ 47
P SQ QQ H A TPTDI A M TL + PPD WYM+ G TSHMT Q
Sbjct: 88 PWVSQNQQTHMASAQVSYTPTDIQAAMQTLSMAPPDEQWYMDTGATSHMTDLQ 140
Score = 26.6 bits (57), Expect(2) = 2e-07
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1
Query: 54 HPKDLQTGRRLIRCESQG 1
H DLQTG L+RC+S G
Sbjct: 135 HMTDLQTGIPLMRCDSSG 152
>ref|XP_004243786.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Solanum lycopersicum]
Length = 460
Score = 61.2 bits (147), Expect = 4e-07
Identities = 30/40 (75%), Positives = 35/40 (87%)
Frame = -1
Query: 843 RGGMRILKSDKRIVIDGLRSCGLSHEARKVQSRIQLAKLL 724
RGGMRILKSDKR VIDGLR G S EA+K+QS+I+LAK+L
Sbjct: 419 RGGMRILKSDKRGVIDGLRGSGYSQEAKKIQSKIRLAKIL 458