BLASTX nr result
ID: Atropa21_contig00029535
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00029535
(558 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004235749.1| PREDICTED: probable ATP-dependent RNA helica... 127 1e-47
ref|XP_006341550.1| PREDICTED: probable ATP-dependent RNA helica... 125 5e-47
ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Ar... 79 6e-14
ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabi... 79 6e-14
gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thali... 79 6e-14
ref|XP_002894123.1| helicase domain-containing protein [Arabidop... 78 1e-13
ref|XP_006306606.1| hypothetical protein CARUB_v10008118mg [Caps... 79 2e-13
gb|EMJ10270.1| hypothetical protein PRUPE_ppa000376mg [Prunus pe... 71 4e-13
ref|XP_006393372.1| hypothetical protein EUTSA_v10011191mg [Eutr... 76 5e-12
gb|EOY21157.1| DEA(D/H)-box RNA helicase family protein isoform ... 75 1e-11
gb|EOY21156.1| DEA(D/H)-box RNA helicase family protein isoform ... 75 1e-11
ref|XP_006490711.1| PREDICTED: probable ATP-dependent RNA helica... 75 1e-11
ref|XP_006451692.1| hypothetical protein CICLE_v10007274mg [Citr... 75 1e-11
ref|XP_006451691.1| hypothetical protein CICLE_v10007274mg [Citr... 75 1e-11
gb|ESW32487.1| hypothetical protein PHAVU_002G326400g [Phaseolus... 74 2e-11
gb|EXB30260.1| putative ATP-dependent RNA helicase DHX36 [Morus ... 73 4e-11
ref|XP_002321501.2| hypothetical protein POPTR_0015s04160g [Popu... 72 6e-11
ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica... 69 3e-10
ref|XP_006584892.1| PREDICTED: probable ATP-dependent RNA helica... 70 3e-10
ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helica... 70 3e-10
>ref|XP_004235749.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
lycopersicum]
Length = 1201
Score = 127 bits (320), Expect(2) = 1e-47
Identities = 77/107 (71%), Positives = 82/107 (76%), Gaps = 3/107 (2%)
Frame = -3
Query: 511 NLIQNCLKVRLNKASQFLATMS-SLQFYPNRFHFKTNTFPYCSSQSVILPHKRCLHGSVG 335
NLIQNCLKVRL KA+QFL+TMS SLQF PNRFHF+TN Y SSQSVI P KRCLHGSVG
Sbjct: 5 NLIQNCLKVRL-KANQFLSTMSTSLQFCPNRFHFETNPLLYRSSQSVI-PQKRCLHGSVG 62
Query: 334 FFCSAKG-XXXXXSVVLRRKRNG-QXXXXXXXXYFYKQNLGYGRFAY 200
FFCSAKG SVVLRRKR+G YFY+QNLGYGRFAY
Sbjct: 63 FFCSAKGSSSSSSSVVLRRKRHGSSSSSSYPSPYFYQQNLGYGRFAY 109
Score = 88.2 bits (217), Expect(2) = 1e-47
Identities = 42/49 (85%), Positives = 45/49 (91%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TLHNIEEWR KL+MLM KK DQEVVS DKKDRRDFEHISA+ATRMGLH
Sbjct: 131 STLHNIEEWRWKLSMLMRKKDDQEVVSTDKKDRRDFEHISAMATRMGLH 179
>ref|XP_006341550.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
tuberosum]
Length = 1205
Score = 125 bits (313), Expect(2) = 5e-47
Identities = 76/111 (68%), Positives = 82/111 (73%), Gaps = 7/111 (6%)
Frame = -3
Query: 511 NLIQNCLKVRLNKASQFLATMS-SLQFYPNRFHFKTNTFPYCSSQSVILPHKRCLHGSVG 335
NLIQNCLKVRL KASQ+L+TMS SLQF PNRFHF+TN Y S+QSVI P KRCLHGSVG
Sbjct: 5 NLIQNCLKVRL-KASQYLSTMSTSLQFCPNRFHFETNPLLYRSTQSVI-PQKRCLHGSVG 62
Query: 334 FFCSAKG-----XXXXXSVVLRRKRNG-QXXXXXXXXYFYKQNLGYGRFAY 200
FFCSAKG SVVLRRKR+G YFY+QNLGYGRFAY
Sbjct: 63 FFCSAKGSSSSSSSSSSSVVLRRKRHGSSSSSSYPSPYFYQQNLGYGRFAY 113
Score = 89.0 bits (219), Expect(2) = 5e-47
Identities = 43/49 (87%), Positives = 45/49 (91%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TLHNIEEWR KL+MLM KK DQEVVS DKKDRRDFEHISALATRMGLH
Sbjct: 135 STLHNIEEWRWKLSMLMRKKDDQEVVSTDKKDRRDFEHISALATRMGLH 183
>ref|NP_001154411.1| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
gi|332194213|gb|AEE32334.1| DEA(D/H)-box RNA helicase
family protein [Arabidopsis thaliana]
Length = 1206
Score = 78.6 bits (192), Expect(2) = 6e-14
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI++WR KL ML+ K DQEVVSR++KDRRDF+HISALATRMGLH
Sbjct: 129 STLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLH 177
Score = 24.3 bits (51), Expect(2) = 6e-14
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 238 FYKQNLGYGRFAY 200
F +QN GYGR AY
Sbjct: 93 FQRQNSGYGRIAY 105
>ref|NP_175298.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
gi|332194212|gb|AEE32333.1| DEA(D/H)-box RNA helicase
family protein [Arabidopsis thaliana]
Length = 1197
Score = 78.6 bits (192), Expect(2) = 6e-14
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI++WR KL ML+ K DQEVVSR++KDRRDF+HISALATRMGLH
Sbjct: 129 STLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLH 177
Score = 24.3 bits (51), Expect(2) = 6e-14
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 238 FYKQNLGYGRFAY 200
F +QN GYGR AY
Sbjct: 93 FQRQNSGYGRIAY 105
>gb|AAG60124.1|AC073555_8 hypothetical protein [Arabidopsis thaliana]
Length = 1167
Score = 78.6 bits (192), Expect(2) = 6e-14
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI++WR KL ML+ K DQEVVSR++KDRRDF+HISALATRMGLH
Sbjct: 99 STLDNIDQWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISALATRMGLH 147
Score = 24.3 bits (51), Expect(2) = 6e-14
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 238 FYKQNLGYGRFAY 200
F +QN GYGR AY
Sbjct: 63 FQRQNSGYGRIAY 75
>ref|XP_002894123.1| helicase domain-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297339965|gb|EFH70382.1| helicase
domain-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1197
Score = 77.8 bits (190), Expect(2) = 1e-13
Identities = 35/49 (71%), Positives = 43/49 (87%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI++WR KL ML+ K DQEVVSR++KDRRDF+HISA+ATRMGLH
Sbjct: 129 STLDNIDQWRLKLTMLLRNKEDQEVVSRERKDRRDFDHISAMATRMGLH 177
Score = 24.3 bits (51), Expect(2) = 1e-13
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3
Query: 238 FYKQNLGYGRFAY 200
F +QN GYGR AY
Sbjct: 93 FQRQNSGYGRIAY 105
>ref|XP_006306606.1| hypothetical protein CARUB_v10008118mg [Capsella rubella]
gi|482575317|gb|EOA39504.1| hypothetical protein
CARUB_v10008118mg [Capsella rubella]
Length = 1198
Score = 79.0 bits (193), Expect(2) = 2e-13
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NIE+WR KL ML+ K DQEVVSR++KDRRDF+HISA+ATRMGLH
Sbjct: 129 STLDNIEQWRFKLTMLLRNKEDQEVVSRERKDRRDFDHISAMATRMGLH 177
Score = 21.9 bits (45), Expect(2) = 2e-13
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3
Query: 238 FYKQNLGYGRFAY 200
F +QN YGR AY
Sbjct: 93 FQRQNSSYGRIAY 105
>gb|EMJ10270.1| hypothetical protein PRUPE_ppa000376mg [Prunus persica]
Length = 1230
Score = 70.9 bits (172), Expect(2) = 4e-13
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI+EWR KL M + K +QEVVSR++KDRRDFEH+S LA RMGL+
Sbjct: 148 STLENIDEWRWKLTMFLRNKDEQEVVSRERKDRRDFEHLSELANRMGLY 196
Score = 29.3 bits (64), Expect(2) = 4e-13
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3
Query: 235 YKQNLGYGRFAY 200
Y+QNLGYGRFAY
Sbjct: 114 YQQNLGYGRFAY 125
>ref|XP_006393372.1| hypothetical protein EUTSA_v10011191mg [Eutrema salsugineum]
gi|557089950|gb|ESQ30658.1| hypothetical protein
EUTSA_v10011191mg [Eutrema salsugineum]
Length = 1199
Score = 76.3 bits (186), Expect = 5e-12
Identities = 34/49 (69%), Positives = 42/49 (85%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI++WR KL ML+ + DQEVVSR++KDRRDFEHIS +ATRMGLH
Sbjct: 131 STLDNIDQWRFKLTMLLRNREDQEVVSRERKDRRDFEHISTMATRMGLH 179
>gb|EOY21157.1| DEA(D/H)-box RNA helicase family protein isoform 2 [Theobroma
cacao]
Length = 971
Score = 75.1 bits (183), Expect = 1e-11
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI+EWR KL ML+ K +QEVVSR++KDRRDFE +SALATRMGLH
Sbjct: 122 STLDNIDEWRWKLTMLLRNKDEQEVVSRERKDRRDFEQLSALATRMGLH 170
>gb|EOY21156.1| DEA(D/H)-box RNA helicase family protein isoform 1 [Theobroma
cacao]
Length = 1193
Score = 75.1 bits (183), Expect = 1e-11
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI+EWR KL ML+ K +QEVVSR++KDRRDFE +SALATRMGLH
Sbjct: 122 STLDNIDEWRWKLTMLLRNKDEQEVVSRERKDRRDFEQLSALATRMGLH 170
>ref|XP_006490711.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X1 [Citrus sinensis]
Length = 1197
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI+EWR KL ML+ K +QEVVSR KKDRRDFE +SALATRMGLH
Sbjct: 128 STLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLH 176
>ref|XP_006451692.1| hypothetical protein CICLE_v10007274mg [Citrus clementina]
gi|557554918|gb|ESR64932.1| hypothetical protein
CICLE_v10007274mg [Citrus clementina]
Length = 1009
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI+EWR KL ML+ K +QEVVSR KKDRRDFE +SALATRMGLH
Sbjct: 128 STLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLH 176
>ref|XP_006451691.1| hypothetical protein CICLE_v10007274mg [Citrus clementina]
gi|557554917|gb|ESR64931.1| hypothetical protein
CICLE_v10007274mg [Citrus clementina]
Length = 1197
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/49 (73%), Positives = 41/49 (83%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI+EWR KL ML+ K +QEVVSR KKDRRDFE +SALATRMGLH
Sbjct: 128 STLDNIDEWRWKLTMLLRNKDEQEVVSRAKKDRRDFEQLSALATRMGLH 176
>gb|ESW32487.1| hypothetical protein PHAVU_002G326400g [Phaseolus vulgaris]
Length = 1201
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NI+EWR KL MLM K +QEVVSR+KKDRRDFE +S LATRMGL+
Sbjct: 131 STLENIDEWRWKLTMLMRSKDEQEVVSREKKDRRDFEQLSTLATRMGLY 179
>gb|EXB30260.1| putative ATP-dependent RNA helicase DHX36 [Morus notabilis]
Length = 1349
Score = 73.2 bits (178), Expect = 4e-11
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL NIEEWR KL MLM + +QE+VSR+KKDRRDF+ ISALATRMGL+
Sbjct: 268 STLDNIEEWRWKLTMLMRNENEQELVSREKKDRRDFDQISALATRMGLY 316
>ref|XP_002321501.2| hypothetical protein POPTR_0015s04160g [Populus trichocarpa]
gi|550321909|gb|EEF05628.2| hypothetical protein
POPTR_0015s04160g [Populus trichocarpa]
Length = 1202
Score = 72.4 bits (176), Expect(2) = 6e-11
Identities = 32/49 (65%), Positives = 41/49 (83%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+TL N+++W+ KL ML+ K QEVVSR+KKDRRDF H+SA+ATRMGLH
Sbjct: 127 STLDNVDDWKWKLTMLLQSKDQQEVVSREKKDRRDFGHLSAMATRMGLH 175
Score = 20.4 bits (41), Expect(2) = 6e-11
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 229 QNLGYGRFAY 200
Q+ YGRFAY
Sbjct: 96 QSFNYGRFAY 105
>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
vinifera]
Length = 1178
Score = 68.9 bits (167), Expect(2) = 3e-10
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = -2
Query: 155 R*TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
R +T NI+EW+ KL ML+ K +QEVVS +KKDRRDFE ISALATRMGL+
Sbjct: 106 RASTHENIDEWKWKLTMLIRNKDEQEVVSTEKKDRRDFEQISALATRMGLY 156
Score = 21.6 bits (44), Expect(2) = 3e-10
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 235 YKQNLGYGRFAY 200
+ QN YGRFAY
Sbjct: 74 FHQNSRYGRFAY 85
>ref|XP_006584892.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X2 [Glycine max]
Length = 1109
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+T NI+EWR KL MLM K DQEVVSR+KKDRRDFE +S +A+RMGL+
Sbjct: 104 STHENIDEWRWKLTMLMRNKDDQEVVSREKKDRRDFEQLSTVASRMGLY 152
>ref|XP_003532529.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like isoform
X1 [Glycine max]
Length = 1177
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -2
Query: 149 TTLHNIEEWR*KLNMLMHKKADQEVVSRDKKDRRDFEHISALATRMGLH 3
+T NI+EWR KL MLM K DQEVVSR+KKDRRDFE +S +A+RMGL+
Sbjct: 104 STHENIDEWRWKLTMLMRNKDDQEVVSREKKDRRDFEQLSTVASRMGLY 152