BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00029440
         (1213 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]   301   e-113
emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]   301   e-112
emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]   300   e-112
emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]   297   e-110
emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]   274   e-105
emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]        269   e-103
emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]   259   e-101
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   277   5e-92
emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]   264   8e-90
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   270   3e-86
gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea ...   256   1e-84
gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s...   253   1e-83
gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyr...   249   8e-81
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]         251   5e-80
gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subc...   249   1e-79
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   252   2e-79
gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subc...   250   3e-79
emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]         249   4e-79
emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]        248   6e-79
gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]     250   6e-79

>emb|CAN82637.1| hypothetical protein VITISV_028818 [Vitis vinifera]
          Length = 1114

 Score =  301 bits (771), Expect(2) = e-113
 Identities = 143/269 (53%), Positives = 195/269 (72%), Gaps = 5/269 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKD-----ESSNYSCVQSFDFNFNIECTTFNLWHNRL 1047
            IL+K+ +FVGKGY  DGM KLS N +      +S Y C          +  +  LWHNRL
Sbjct: 288  ILTKSRNFVGKGYSCDGMIKLSTNDNINKMTSTSAYMC----------DSNSLILWHNRL 337

Query: 1046 GHVNYQTMKFMCNNGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICEL 867
             HV   T+K +   G+I+   +  EKCE+CV+ KM +KPF  V+R S +L+L+HSD+CEL
Sbjct: 338  AHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLIHSDLCEL 397

Query: 866  NGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDR 687
            NG+LTRGG+RYF+TFIDD S+FTYV+L+K+K   ++ F+VYK  VE Q GK +K+LRSDR
Sbjct: 398  NGMLTRGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLGKNIKVLRSDR 457

Query: 686  GGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWG 507
            GGEYFS+EF SFCE  GI+H+ +APY PQ NG+AERKN   ++MVNAM++++ L  NLWG
Sbjct: 458  GGEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWG 517

Query: 506  EALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            EALL AC++ NR+P KK ++SPY++ +G+
Sbjct: 518  EALLIACYILNRIPMKKNEISPYELWKGR 546



 Score =  137 bits (345), Expect(2) = e-113
 Identities = 77/138 (55%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
 Frame = -2

Query: 423 KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSNVIVESR 244
           +KPNI YF+VW CL Y K  DP KTKLGPRA+K  F+GYA NSKAYRLLDL+SNVI+ESR
Sbjct: 546 RKPNIGYFKVWGCLTYCKKTDPNKTKLGPRAIKCAFVGYASNSKAYRLLDLESNVIIESR 605

Query: 243 DVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVRKEKNLDS 64
           +VE FEN        +  S+   Q ET S +  + +          R+S R RKEK L S
Sbjct: 606 EVEFFENLLSDSNSQVPTSVGESQEETLSKVVEQPI--------VPRKSQRARKEKVLGS 657

Query: 63  DFINSQAISF-LVEGNRE 13
           D I+SQ ISF LVEGNRE
Sbjct: 658 DEIDSQRISFYLVEGNRE 675


>emb|CAN66873.1| hypothetical protein VITISV_021427 [Vitis vinifera]
          Length = 1473

 Score =  301 bits (771), Expect(2) = e-112
 Identities = 143/269 (53%), Positives = 193/269 (71%), Gaps = 5/269 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKD-----ESSNYSCVQSFDFNFNIECTTFNLWHNRL 1047
            IL+K+G+FVGKGY  DGM KLS N +      +S Y C          +  +  LWHNRL
Sbjct: 398  ILTKSGNFVGKGYSCDGMIKLSTNDNINKMTSTSAYMC----------DSNSLXLWHNRL 447

Query: 1046 GHVNYQTMKFMCNNGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICEL 867
             HV   T+K +   G+I+   +  EKCE+CV+ KM +KPF  V+R S +L+L HSD+CEL
Sbjct: 448  AHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLXHSDLCEL 507

Query: 866  NGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDR 687
            NG+LTRGG+RYF+TFIDD S+FTYV+L+K+K   ++ F+VYK  VE Q  K +K+LRSDR
Sbjct: 508  NGMLTRGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLXKNIKVLRSDR 567

Query: 686  GGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWG 507
            G EYFS+EF SFCE  GI+H+ +APY PQ NG+AERKN   ++MVN M++++ L  NLWG
Sbjct: 568  GXEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNXMLLHAKLNFNLWG 627

Query: 506  EALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            EALLTACH+ NR+P KK ++SPY++ +G+
Sbjct: 628  EALLTACHILNRIPMKKKEISPYELWKGR 656



 Score =  134 bits (336), Expect(2) = e-112
 Identities = 76/138 (55%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSNVIVESR 244
            +KPNI YF+VW CLAY K  DP KTKLGPRA+K  F+G A NS AYRLLDL+SNVI+ESR
Sbjct: 656  RKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFVGCASNSNAYRLLDLESNVIIESR 715

Query: 243  DVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVRKEKNLDS 64
            +VE FEN        +  S+   Q ET S +  + +          R+S R RKEK L S
Sbjct: 716  EVEFFENLLSDSNSQVPTSVGESQEETPSKVVEQPI--------VPRKSQRARKEKVLGS 767

Query: 63   DFINSQAISF-LVEGNRE 13
            D I+SQ ISF LVEGNRE
Sbjct: 768  DEIDSQRISFYLVEGNRE 785


>emb|CAN68340.1| hypothetical protein VITISV_025981 [Vitis vinifera]
          Length = 791

 Score =  300 bits (768), Expect(2) = e-112
 Identities = 142/269 (52%), Positives = 192/269 (71%), Gaps = 5/269 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKD-----ESSNYSCVQSFDFNFNIECTTFNLWHNRL 1047
            ILSK+G+FVG GY  DGM KL  N +      +S Y C          +  +  LWHNRL
Sbjct: 376  ILSKSGNFVGNGYSCDGMIKLCTNDNIIKMASTSAYMC----------DSNSLILWHNRL 425

Query: 1046 GHVNYQTMKFMCNNGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICEL 867
             HV    +K +   G+I+   +  EKCE+CV+ KM +KPF  V+R S +L+L+HSD+CEL
Sbjct: 426  AHVGLSIIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLIHSDLCEL 485

Query: 866  NGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDR 687
            NG+LTRGG+RYF+TFIDD S+FTYV+L+K+K   ++ F+VY   VE Q GK +K+LRSDR
Sbjct: 486  NGMLTRGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYNAKVENQLGKNIKVLRSDR 545

Query: 686  GGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWG 507
            GGEYFS+EF SFCE  GI+H+ +APY PQ NG+AERKN   ++MVNAM++++ L  NLWG
Sbjct: 546  GGEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWG 605

Query: 506  EALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            EALL ACH+ NR+P KK ++SPY++ +G+
Sbjct: 606  EALLIACHILNRIPMKKNEISPYELWKGR 634



 Score =  134 bits (338), Expect(2) = e-112
 Identities = 75/138 (54%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSNVIVESR 244
            +KPNI YF+VWRCLAY K  DP KTKLGPRA+K  F+GYA NSKAYR+LDL+SNVI+ESR
Sbjct: 634  RKPNIGYFKVWRCLAYCKKTDPYKTKLGPRAIKCAFVGYASNSKAYRILDLESNVIIESR 693

Query: 243  DVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVRKEKNLDS 64
            +VE F+N        +  S+     ET S +  + +          R+S R RKEK L S
Sbjct: 694  EVEFFKNLLSDSNSQVPTSVGESLEETPSKVVEQPIM--------PRKSQRARKEKVLGS 745

Query: 63   DFINSQAISF-LVEGNRE 13
            + I+SQ ISF LVEGNRE
Sbjct: 746  NEIDSQRISFYLVEGNRE 763


>emb|CAN66710.1| hypothetical protein VITISV_006397 [Vitis vinifera]
          Length = 1105

 Score =  297 bits (760), Expect(2) = e-110
 Identities = 141/269 (52%), Positives = 191/269 (71%), Gaps = 5/269 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKD-----ESSNYSCVQSFDFNFNIECTTFNLWHNRL 1047
            ILSK+G+FVGKGY  DGM KL  N +      +S Y C          +  +  LWHNRL
Sbjct: 191  ILSKSGNFVGKGYSCDGMIKLCTNDNIIKMASTSAYMC----------DSNSLFLWHNRL 240

Query: 1046 GHVNYQTMKFMCNNGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICEL 867
             HV   T+K +   G+I+   +  EKCE+CV+ KM +K F  V+R S +L+L HSD+CEL
Sbjct: 241  AHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKKXFHSVERSSNLLDLXHSDLCEL 300

Query: 866  NGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDR 687
            N +LTRGG+ YF+TFID+ S+FTYV+L+K+K   ++ F+VYK  VE Q GK +K+LRSDR
Sbjct: 301  NXMLTRGGNXYFJTFIDBXSRFTYVFLLKNKSETFNAFKVYKTEVENQLGKNIKVLRSDR 360

Query: 686  GGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWG 507
            GGEYFS+EF SFCE  GI+H+ +APY PQ NG+AERKN   ++MVNAM++++ L  NLWG
Sbjct: 361  GGEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWG 420

Query: 506  EALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            EAL TACH+ NR+P KK ++SPY++ +G+
Sbjct: 421  EALFTACHILNRIPMKKNEISPYELWKGR 449



 Score =  130 bits (326), Expect(2) = e-110
 Identities = 74/138 (53%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
 Frame = -2

Query: 423 KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSNVIVESR 244
           +KPNI YF+VW CLAY K  DP KTKL PRA+K  F+GYA NSKAYRLLDL+ N I+ESR
Sbjct: 449 RKPNIGYFKVWGCLAYCKKTDPNKTKLXPRAIKCAFVGYASNSKAYRLLDLEXNXIIESR 508

Query: 243 DVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVRKEKNLDS 64
           +VE FEN        +  S+     ET S +  + +          R+S R RKEK L S
Sbjct: 509 EVEFFENLLSDSNSQVPTSVGESLEETPSKVIEQPI--------VPRKSQRARKEKVLGS 560

Query: 63  DFINSQAISF-LVEGNRE 13
           D I+SQ ISF LVEGNRE
Sbjct: 561 DEIDSQRISFYLVEGNRE 578


>emb|CAN69855.1| hypothetical protein VITISV_041230 [Vitis vinifera]
          Length = 1236

 Score =  274 bits (701), Expect(2) = e-105
 Identities = 135/269 (50%), Positives = 182/269 (67%), Gaps = 5/269 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKD-----ESSNYSCVQSFDFNFNIECTTFNLWHNRL 1047
            ILSK+G+FVGKGY  DGM KL  N +      +S Y C          +  +  LWHNRL
Sbjct: 350  ILSKSGNFVGKGYSCDGMIKLCTNDNIIKMASTSAYMC----------DSNSLFLWHNRL 399

Query: 1046 GHVNYQTMKFMCNNGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICEL 867
             HV   T+K +   G+I+   +  EKCE+CV+ KM + PF  V+R S +L+L+HSD+CEL
Sbjct: 400  AHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKMPFHSVERSSNLLDLIHSDLCEL 459

Query: 866  NGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDR 687
            NG+LT+GG+RYF+TFIDD S+FTYV+L+K+K   ++ F+VYK  VE Q GK +K+LRSDR
Sbjct: 460  NGMLTKGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLGKNIKVLRSDR 519

Query: 686  GGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWG 507
            GGEYFS+EF SFCE  GI+H+ +APY PQ NG+AERKN   ++M               G
Sbjct: 520  GGEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEM---------------G 564

Query: 506  EALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            EALL ACH+ NR+P KK ++SPY++ +G+
Sbjct: 565  EALLIACHILNRIPMKKNEISPYELWKGR 593



 Score =  135 bits (340), Expect(2) = e-105
 Identities = 78/138 (56%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
 Frame = -2

Query: 423 KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSNVIVESR 244
           +KPNI YF+VW CLAY K  DP KTKLGPRA+K  F+GYA NSKAYRLLDL+SNVI+ESR
Sbjct: 593 RKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFVGYASNSKAYRLLDLESNVIIESR 652

Query: 243 DVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVRKEKNLDS 64
           +VE FEN         D + Q+P T    +L     ++        R+S R RKEK L S
Sbjct: 653 EVEFFENWLS------DSNFQVP-TSVGESLEETPSKVVEQPIVP-RKSQRARKEKVLGS 704

Query: 63  DFINSQAISF-LVEGNRE 13
           D I+SQ ISF LVEGNRE
Sbjct: 705 DEIDSQRISFYLVEGNRE 722


>emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus]
          Length = 1358

 Score =  269 bits (688), Expect(2) = e-103
 Identities = 122/219 (55%), Positives = 165/219 (75%), Gaps = 1/219 (0%)
 Frame = -3

Query: 1073 TFNLWHNRLGHVNYQTMKFMCNNGIISYSNEHKEKCEVCVQVKMKRKPFPKVD-RQSEIL 897
            + +LWH RL H N + ++ M   G++  +++  EKCE CV+ K  +KPFP V  R + +L
Sbjct: 491  SISLWHKRLAHTNIKNIEKMQTKGLLKLNDKDFEKCETCVKSKFTKKPFPSVPKRNTSLL 550

Query: 896  ELVHSDICELNGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKG 717
            EL+HSDICELNGVLTRGG RYFI+F DD S++ YVYL+ SKD A++ F++YK  VE QK 
Sbjct: 551  ELIHSDICELNGVLTRGGKRYFISFCDDSSRYLYVYLLHSKDEAFEAFKIYKAEVEKQKE 610

Query: 716  KKLKILRSDRGGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIV 537
            K++KILRSDRGGEYF+  F +FCE  GI+H+ +APY PQQNG+AERKN  LV+M N M+ 
Sbjct: 611  KRIKILRSDRGGEYFNRRFDAFCEEEGIIHERTAPYTPQQNGLAERKNRTLVEMANCMLN 670

Query: 536  NSNLPMNLWGEALLTACHVHNRVPSKKLKLSPYKI*RGK 420
             S LP N+WGEA+LTAC+VHNR+ S+ +  SPY++ +G+
Sbjct: 671  QSGLPRNMWGEAVLTACYVHNRITSRVIPTSPYELWKGR 709



 Score =  133 bits (334), Expect(2) = e-103
 Identities = 71/139 (51%), Positives = 95/139 (68%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSNVIVESR 244
            +KPN+ + RVW CLAYY+VPDPK  KLG RA K++F+GYA +SK+YRLLD +S ++VESR
Sbjct: 709  RKPNLEHLRVWGCLAYYRVPDPKTLKLGERAFKSVFIGYASHSKSYRLLDDESGIVVESR 768

Query: 243  DVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVRKEKNLDS 64
            DVE FENKF  D +N + +       T+S+ S K V+ +P    E R+S RVRKEK+   
Sbjct: 769  DVEFFENKFSRDDENSNGT-------TTSSTSEKRVQPSP-IVEEPRKSTRVRKEKSYGD 820

Query: 63   DFINSQAISFLVEGNREVV 7
            DF      S+LVEG ++ V
Sbjct: 821  DF-----FSYLVEGTQKKV 834


>emb|CAN66959.1| hypothetical protein VITISV_013138 [Vitis vinifera]
          Length = 1234

 Score =  259 bits (661), Expect(2) = e-101
 Identities = 130/269 (48%), Positives = 174/269 (64%), Gaps = 5/269 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKD-----ESSNYSCVQSFDFNFNIECTTFNLWHNRL 1047
            ILSK+G+FVGKGY  DGM KL  N +      +S Y C          +  +  LWHNRL
Sbjct: 398  ILSKSGNFVGKGYSCDGMIKLCTNDNIIKMASTSAYMC----------DSNSLFLWHNRL 447

Query: 1046 GHVNYQTMKFMCNNGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICEL 867
             HV   T+K +   G+I+   +  EKCE+CV+ KM +KPF  V+R S +L+LVHSD+CEL
Sbjct: 448  AHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLVHSDLCEL 507

Query: 866  NGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDR 687
            NG+LTRGG+                         ++ F+VYK  VE Q GK +K+LRSDR
Sbjct: 508  NGMLTRGGNSE----------------------TFNAFKVYKTEVENQLGKNIKVLRSDR 545

Query: 686  GGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWG 507
            GGEYFS+EF SFCE  GI+H+ +APY PQ NG+AERKN   ++MVNAM++++ L  NLWG
Sbjct: 546  GGEYFSSEFNSFCEEYGIIHECTAPYTPQHNGIAERKNRTFLEMVNAMLLHAKLNFNLWG 605

Query: 506  EALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            EAL TACH+ NR+P KK ++SPY++ +G+
Sbjct: 606  EALFTACHILNRIPMKKNEISPYELWKGR 634



 Score =  136 bits (343), Expect(2) = e-101
 Identities = 77/138 (55%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSNVIVESR 244
            +KPNI YF+VW CLAY K  DP KTKLGPRA+K  F+GYA NSKAYRLLDL+SNVI+ESR
Sbjct: 634  RKPNIGYFKVWGCLAYCKKTDPNKTKLGPRAIKCAFVGYASNSKAYRLLDLESNVIIESR 693

Query: 243  DVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVRKEKNLDS 64
            +VE FEN        +  S+     ET S +  + +          R+S R RKEK L S
Sbjct: 694  EVEFFENLLSDSNSQVPXSVGESLEETPSKVVEQPI--------VPRKSQRARKEKVLGS 745

Query: 63   DFINSQAISF-LVEGNRE 13
            D I+SQ ISF LVEGNRE
Sbjct: 746  DEIDSQRISFYLVEGNRE 763


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  277 bits (709), Expect(2) = 5e-92
 Identities = 133/265 (50%), Positives = 188/265 (70%), Gaps = 1/265 (0%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKDESSNYSCVQSFDFNFNIECTTFNLWHNRLGHVNY 1032
            +LSK+G +VGKGY+SDGM+KL++     SN +   +  +       + NLWH RLGHVNY
Sbjct: 427  VLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLE----SSNLWHGRLGHVNY 482

Query: 1031 QTMKFMCN-NGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICELNGVL 855
             T++ + N N I ++      KCE CV+ K+ R  F  V+R +E L+L+HSDIC+L  V 
Sbjct: 483  DTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQ 542

Query: 854  TRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRGGEY 675
            TRGG++YFITF+DD +K+ YVYL+KSKD A + F +YK  VE Q  KK+K+LRSDRGGEY
Sbjct: 543  TRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEY 602

Query: 674  FSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGEALL 495
              + F   C  +GI+H+ +APY PQ NGVAERKN  L +M+NAM+++S+LP N+WGEA+L
Sbjct: 603  -ESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKEMMNAMLISSSLPQNMWGEAIL 661

Query: 494  TACHVHNRVPSKKLKLSPYKI*RGK 420
            TA ++ N+VP KK + +PY++ +G+
Sbjct: 662  TANYLLNKVPKKKAEKTPYELWKGR 686



 Score = 89.0 bits (219), Expect(2) = 5e-92
 Identities = 54/141 (38%), Positives = 75/141 (53%), Gaps = 7/141 (4%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLL-------DLDS 265
            +KP+ +Y R+W CLA   VP PKK K+GP+ +  IF+GYA NS AYR L       D+  
Sbjct: 686  RKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHK 745

Query: 264  NVIVESRDVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVR 85
            N I+ESR+   FE+ F    K         +  +SS    ++   N     E RRS RVR
Sbjct: 746  NTIMESRNASFFEDVFPCKSK---------EEPSSSKRMLESQDQNEEVEVEPRRSKRVR 796

Query: 84   KEKNLDSDFINSQAISFLVEG 22
             EK+   DF     ++F++EG
Sbjct: 797  TEKSFGPDF-----LTFMLEG 812


>emb|CAN78666.1| hypothetical protein VITISV_032507 [Vitis vinifera]
          Length = 804

 Score =  264 bits (674), Expect(2) = 8e-90
 Identities = 133/270 (49%), Positives = 181/270 (67%), Gaps = 6/270 (2%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKD-----ESSNYSCVQSFDFNFNIECTTFNLWHNRL 1047
            IL K+G+FVGKGY  DGM KLS N +       S Y C          +  +  LWHNRL
Sbjct: 398  ILXKSGNFVGKGYSCDGMIKLSTNDNINKMTSXSAYMC----------DSNSLXLWHNRL 447

Query: 1046 GHVNYQTMKFMCNNGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICEL 867
             HV   T+K +   G+I+   +  EKCE+CV+ KM +KPF  V+R S +L+L HSD+CEL
Sbjct: 448  AHVGLSTIKRIVKCGLIACDTKKFEKCEICVKSKMIKKPFHSVERSSNLLDLXHSDLCEL 507

Query: 866  NGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDR 687
            NG+LTRGG+RYF+TFIDD S+FTYV+L+K+K   ++ F+VYK  VE Q GK +K+LRSDR
Sbjct: 508  NGMLTRGGNRYFLTFIDDCSRFTYVFLLKNKSETFNAFKVYKAEVENQLGKNIKVLRSDR 567

Query: 686  GGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWG 507
            GGEYFS+EF SFCE  GI+H+    +                +MVNAM++++ L  NLWG
Sbjct: 568  GGEYFSSEFNSFCEEYGIIHEERIEHS--------------XEMVNAMLLHAKLNFNLWG 613

Query: 506  EALLTACHVHNRVPS-KKLKLSPYKI*RGK 420
            EALLTACH+ NR+P+ +K ++SPY++ +G+
Sbjct: 614  EALLTACHILNRIPTEEKSEISPYELXKGR 643



 Score = 95.1 bits (235), Expect(2) = 8e-90
 Identities = 44/61 (72%), Positives = 51/61 (83%)
 Frame = -2

Query: 423 KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSNVIVESR 244
           +KPNI YF+VW CLAY K  D  KTKLGPRA+K  F+GYA NSKAYRLLDL+SNVI+ESR
Sbjct: 643 RKPNIXYFKVWGCLAYCKKTDXHKTKLGPRAIKCAFVGYASNSKAYRLLDLESNVIIESR 702

Query: 243 D 241
           +
Sbjct: 703 E 703


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  270 bits (691), Expect(2) = 3e-86
 Identities = 130/265 (49%), Positives = 185/265 (69%), Gaps = 1/265 (0%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKDESSNYSCVQSFDFNFNIECTTFNLWHNRLGHVNY 1032
            +LSK+G +VGKGY+SDGM+KL++     SN +   +  +       + NLWH RL HVNY
Sbjct: 427  VLSKSGMYVGKGYMSDGMWKLNVMTIIKSNMNKASTSTYMLE----SSNLWHGRLRHVNY 482

Query: 1031 QTMKFMCN-NGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICELNGVL 855
             T++ + N N I ++      KCE CV+ K+ R  F  V+R +E L+L+HSDIC+L  V 
Sbjct: 483  DTLRRLINLNHIPTFQINSNHKCETCVEAKLTRSSFQSVERNTEPLDLIHSDICDLKFVQ 542

Query: 854  TRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRGGEY 675
            TRGG++YFITF+DD +K+ YVYL+KSKD A + F +YK  VE Q  KK+K+LRSDRGGEY
Sbjct: 543  TRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEY 602

Query: 674  FSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGEALL 495
              + F   C  +GI+H+ + PY PQ NGVAERKN  L +M+NAM+++ +LP N+WGEA+L
Sbjct: 603  -ESPFVDICAQHGIIHETTTPYSPQSNGVAERKNRTLKEMMNAMLISFSLPQNMWGEAIL 661

Query: 494  TACHVHNRVPSKKLKLSPYKI*RGK 420
            TA ++ N+VP KK + +PY++ +G+
Sbjct: 662  TANYLLNKVPKKKAEKTPYELWKGR 686



 Score = 76.6 bits (187), Expect(2) = 3e-86
 Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 7/87 (8%)
 Frame = -2

Query: 423 KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLL-------DLDS 265
           +KP+ +Y R+W CLA   VP PKK K+GP+ +  IF+GYA NS AYR L       D+  
Sbjct: 686 RKPSYTYLRMWGCLAKVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHK 745

Query: 264 NVIVESRDVEVFENKFRSDFKNIDESL 184
           N I+ESR+   FE+ F  + +   E++
Sbjct: 746 NTIMESRNASFFEDVFPCEPQTFKEAV 772


>gb|AAP94586.1| putative retrotransposon RIRE1 poly protein [Zea mays]
          Length = 1309

 Score =  256 bits (654), Expect(2) = 1e-84
 Identities = 125/269 (46%), Positives = 181/269 (67%), Gaps = 5/269 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKDESSNYSCVQSFDFNFNIECTTF---NLWHNRLGH 1041
            +LSK G+FVGK Y S G+F+LS+  + SS         ++ N+ C      N+WH+RL H
Sbjct: 407  VLSKFGTFVGKSYESGGLFRLSVLNNHSS---------YHVNVVCNNDSINNIWHSRLCH 457

Query: 1040 VNYQTMKFMCNNGII-SYSNEHKEKCEVCVQVKMKRKPFPKVD-RQSEILELVHSDICEL 867
            VN++ +K + +  +I  Y +    KC +CVQ K  RKPF  V+ R +  LEL+HSDICE+
Sbjct: 458  VNFEAIKRLSDMSLIPEYKHVKGVKCGICVQAKQPRKPFHTVEGRSTTPLELIHSDICEM 517

Query: 866  NGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDR 687
            NG++ +GG RYF+T IDD ++F Y+YL+++KD A + F++YK  VE Q  KK+K LRSDR
Sbjct: 518  NGIIIKGGKRYFLTLIDDATRFCYIYLLRTKDEALEHFKIYKTEVENQLDKKIKRLRSDR 577

Query: 686  GGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWG 507
            GGEY S  F  +C+  GI+H+ +APY PQ NGVAERKN  + D+ NA++ +S +P   WG
Sbjct: 578  GGEYLSNLFDEYCKECGIIHETTAPYSPQSNGVAERKNRTVCDLANALLQSSGMPDIWWG 637

Query: 506  EALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            EA+LT C+V NRVP +  + +PY+  +G+
Sbjct: 638  EAVLTVCYVLNRVPPRNREATPYEGFKGR 666



 Score = 85.5 bits (210), Expect(2) = 1e-84
 Identities = 58/132 (43%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDS------- 265
            +KP++S+ R W CLA   VP PKK KLGP+ +  +F+GYA NS AYR L + S       
Sbjct: 666  RKPDLSHLRTWGCLAKVNVPLPKKRKLGPKTVDCVFLGYAHNSAAYRFLVVHSETSEIAV 725

Query: 264  NVIVESRDVEVFENKFRSDFKNIDESLQIPQ--TETSSNLSSKNVRINPNAFSEHRRSVR 91
            NVI+ESRDV  FE    S F   D+ +  P   + T S  SS N   +     E RRS R
Sbjct: 726  NVIMESRDVTFFE----SIFPMRDKEVVAPDGPSRTYSLPSSVN---DQTPDLELRRSKR 778

Query: 90   VRKEKNLDSDFI 55
             R EK+L  D+I
Sbjct: 779  QRTEKSLGDDYI 790


>gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1038

 Score =  253 bits (647), Expect(2) = 1e-83
 Identities = 123/268 (45%), Positives = 186/268 (69%), Gaps = 5/268 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKL---SINKDESSNYSCVQSFDFNFNIECTTFNLWHNRLGH 1041
            +L+K G+FVGKGY+S+G+F L   S+N + SS+   ++S            NLWH RLGH
Sbjct: 426  VLTKNGNFVGKGYLSNGLFVLNTISMNANASSSAYLIESA-----------NLWHGRLGH 474

Query: 1040 VNYQTMKFMCNNGIISYSNEHKE-KCEVCVQVKMKRKPFPKVD-RQSEILELVHSDICEL 867
            VN+ +++ + +  +I+ S  H+  KC VC++ K  +KPF  V+ R +E+LEL++SD+ + 
Sbjct: 475  VNFASIRKLKDMRLINTSETHETGKCPVCIESKFHKKPFKPVEYRTTELLELIYSDLADF 534

Query: 866  NGVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDR 687
                +RGG  Y+++F+DDYS+FT +YL+K+K+ A  MF  +K   E Q GK++K LRSDR
Sbjct: 535  RTTASRGGKNYYVSFVDDYSRFTKIYLIKTKNEAVSMFVKFKAESENQLGKRIKRLRSDR 594

Query: 686  GGEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWG 507
            GGEY       FCE+NGI+H+ +APY PQQNG+AERKN  L +M+NAM+++S L  N+WG
Sbjct: 595  GGEYSDKTLKEFCESNGIIHEFTAPYSPQQNGIAERKNRTLKEMMNAMLLSSGLSDNMWG 654

Query: 506  EALLTACHVHNRVPSKKLKLSPYKI*RG 423
            EA+L+AC + NR+P K+L  +PY++ +G
Sbjct: 655  EAVLSACFILNRIPHKRLDKTPYELWKG 682



 Score = 84.7 bits (208), Expect(2) = 1e-83
 Identities = 52/143 (36%), Positives = 77/143 (53%), Gaps = 4/143 (2%)
 Frame = -2

Query: 417  PNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSNVIVESRDV 238
            PN+SY +VW CLA   +P  KKT +GP+    IF+ YA+NS AYR + L+   I ESRDV
Sbjct: 685  PNLSYLKVWGCLAKVPLPALKKTTVGPKTFDCIFIEYAQNSAAYRFMCLNDKTINESRDV 744

Query: 237  EVFENKFRSD----FKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVRKEKNL 70
            E FE+ F         ++   +  P+  + + +S      N +   E +RS R R EK+ 
Sbjct: 745  EFFEHVFPLKQSLYAPSLSNRMHDPEIVSETPVSETVDTPNLSCELEPKRSKRQRTEKSF 804

Query: 69   DSDFINSQAISFLVEGNREVVTN 1
              DF++    +F+VE   E+  N
Sbjct: 805  GPDFLS----TFIVERRDEIDCN 823


>gb|ABW81017.1| gag-pol polymerase [Arabidopsis lyrata subsp. lyrata]
          Length = 1034

 Score =  249 bits (636), Expect(2) = 8e-81
 Identities = 124/260 (47%), Positives = 176/260 (67%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINKDESSNYSCVQSFDFNFNIECTTFNLWHNRLGHVNY 1032
            +LSK G FVG GY  +GMF L+INK  +S Y    S +          +LWH RLGHV+Y
Sbjct: 358  VLSKCGVFVGFGYFCNGMFMLNINKVVNSIYMACSSKNDT--------SLWHARLGHVHY 409

Query: 1031 QTMKFMCNNGIISYSNEHKEKCEVCVQVKMKRKPFPKVDRQSEILELVHSDICELNGVLT 852
            + M  M   G+I   + + EKC  C+  K+ R+PF  ++R S++LEL+HSD+C+++   +
Sbjct: 410  KGMIEMSKEGLIPTFDVNIEKCRTCMLTKIIRQPFKSIERNSKVLELIHSDLCDIHATSS 469

Query: 851  RGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRGGEYF 672
             G  +YFITFIDDYS+F YVYL+ +KD A + F+VYK  VE Q    +K LR+DRGGEY+
Sbjct: 470  LGNKKYFITFIDDYSRFCYVYLLHAKDEALEKFKVYKTEVELQHSDLVKKLRTDRGGEYY 529

Query: 671  STEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGEALLT 492
                 ++ ++ GI+H+ +APY PQQNGV ERKN VL +MVN+M+  S L    WGEA+LT
Sbjct: 530  D---PTYFQSVGIIHETTAPYTPQQNGVFERKNRVLKEMVNSMLSYSGLSDGFWGEAMLT 586

Query: 491  ACHVHNRVPSKKLKLSPYKI 432
            AC++ NRVP+K+ K++PY++
Sbjct: 587  ACYLLNRVPNKRNKITPYEL 606



 Score = 79.7 bits (195), Expect(2) = 8e-81
 Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 6/144 (4%)
 Frame = -2

Query: 426  RKKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLLDLDSN----- 262
            +KKPN++Y RVW C A  ++P PK   LG R +  IF+GYA +SKAYR   ++ N     
Sbjct: 609  KKKPNLNYLRVWGCRAIVRLPQPKIKTLGERGIDCIFIGYALHSKAYRFYVIEPNDSIAV 668

Query: 261  -VIVESRDVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNVRINPNAFSEHRRSVRVR 85
              ++ESRD    EN+F +  +  D    +P   +S      +  + PN     R+S R R
Sbjct: 669  HTVIESRDAIFDENRFSTIPRQKD---LVP--SSSGTKEGDDTFVPPNESPTLRKSKRGR 723

Query: 84   KEKNLDSDFINSQAISFLVEGNRE 13
             EK+   DF       +LVEG R+
Sbjct: 724  IEKSFGPDF-----QLYLVEGTRD 742


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  251 bits (640), Expect(2) = 5e-80
 Identities = 129/268 (48%), Positives = 177/268 (66%), Gaps = 4/268 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINK--DESSNYSCVQSFDFNFNIECTTFNLWHNRLGHV 1038
            ++SK G F+GKGY   G+F+ S++   ++S N+ C    D          N+WH+RL H+
Sbjct: 390  VVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDD--------EANVWHSRLCHI 441

Query: 1037 NYQTMKFMCNNGII-SYSNEHKEKCEVCVQVKMKRKPFPKVD-RQSEILELVHSDICELN 864
            N+  M  + +  +I  +S     KC  CVQ K  RKP    + R    LEL+HSD+CE+N
Sbjct: 442  NFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMN 501

Query: 863  GVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRG 684
            GVLT+GG RYF+TFIDD ++F YVYL+K+KD A D F++YK  VE Q  +K+K LRSDRG
Sbjct: 502  GVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRG 561

Query: 683  GEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGE 504
            GE+FS EF  FCE +GI+H+ + PY P+ NG+AERKN  L D+VNAM+  + LP   WGE
Sbjct: 562  GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 503  ALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            ALLT+ HV NRVP++    +PY+I  G+
Sbjct: 622  ALLTSNHVLNRVPNRNKDKTPYEIWIGR 649



 Score = 75.5 bits (184), Expect(2) = 5e-80
 Identities = 51/139 (36%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYR-------LLDLDS 265
            +KP++SY R+W CLA   VP  KK KLGP+ +  +F+GYA +S AYR       +LD+  
Sbjct: 649  RKPSLSYLRIWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHV 708

Query: 264  NVIVESRDVEVFENKF---------RSDFKNIDESLQIP-QTETSSNLSSKNVRINPNAF 115
              I+ESRD   FE+ F             + I  S+  P QTE +  L S+      +  
Sbjct: 709  GTIIESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEE-----DVS 763

Query: 114  SEHRRSVRVRKEKNLDSDF 58
               RRS R R  K+   DF
Sbjct: 764  EAPRRSKRQRTAKSFGDDF 782


>gb|ABA98136.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1249

 Score =  249 bits (635), Expect(2) = 1e-79
 Identities = 128/268 (47%), Positives = 177/268 (66%), Gaps = 4/268 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINK--DESSNYSCVQSFDFNFNIECTTFNLWHNRLGHV 1038
            ++SK G F+GKGY   G+F+ S++   ++S N+ C    D          N+WH+RL H+
Sbjct: 390  VVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDD--------EANVWHSRLCHI 441

Query: 1037 NYQTMKFMCNNGII-SYSNEHKEKCEVCVQVKMKRKPFPKVD-RQSEILELVHSDICELN 864
            N+  M  + +  +I ++S     KC  CVQ K  RKP    + R    LEL+HSD+CE+N
Sbjct: 442  NFGLMSRLSSMCLIPNFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMN 501

Query: 863  GVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRG 684
            GVLT+GG RYF+T IDD ++F YVYL+K+KD A D F++YK  VE Q  +K+K LRSDRG
Sbjct: 502  GVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRG 561

Query: 683  GEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGE 504
            GE+FS EF  FCE +GI+H+ + PY P+ NG+AERKN  L D+VNAM+  + LP   WGE
Sbjct: 562  GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 503  ALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            ALLT+ HV NRVP++    +PY+I  G+
Sbjct: 622  ALLTSNHVLNRVPNRNKDKTPYEIWIGR 649



 Score = 76.3 bits (186), Expect(2) = 1e-79
 Identities = 52/139 (37%), Positives = 69/139 (49%), Gaps = 17/139 (12%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLL-------DLDS 265
            +KP++SY R W CLA   VP  KK KLGP+ +  +F+GYA +S AYR L       D+  
Sbjct: 649  RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708

Query: 264  NVIVESRDVEVFENKF---------RSDFKNIDESLQIP-QTETSSNLSSKNVRINPNAF 115
              I+ESRD   FE+ F            F+ I  S+  P QTE +  L S+      +  
Sbjct: 709  GTIMESRDATFFESFFPMKDTHSGSNQPFEIIPSSITPPEQTEHTHELVSEE-----DVS 763

Query: 114  SEHRRSVRVRKEKNLDSDF 58
               RRS R R  K+   DF
Sbjct: 764  EAPRRSKRQRTAKSFGDDF 782


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  252 bits (644), Expect(2) = 2e-79
 Identities = 129/268 (48%), Positives = 178/268 (66%), Gaps = 4/268 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINK--DESSNYSCVQSFDFNFNIECTTFNLWHNRLGHV 1038
            ++SK G F+GKGY   G+F+ S++   ++S N+ C    D          N+WH+RL H+
Sbjct: 351  VVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDD--------EANVWHSRLCHI 402

Query: 1037 NYQTMKFMCNNGII-SYSNEHKEKCEVCVQVKMKRKPFPKVD-RQSEILELVHSDICELN 864
            N+  M  + +  +I  +S     KC  CVQ K  RKP    + R    LEL+HSD+CE+N
Sbjct: 403  NFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMN 462

Query: 863  GVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRG 684
            GVLT+GG RYF+TFIDD ++F YVYL+K+KD A D F++YK  VE Q  +K+K LRSDRG
Sbjct: 463  GVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRG 522

Query: 683  GEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGE 504
            GE+FS EF  FCE +GI+H+++ PY P+ NG+AERKN  L D+VNAM+  + LP   WGE
Sbjct: 523  GEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 582

Query: 503  ALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            ALLT+ HV NRVP++    +PY+I  G+
Sbjct: 583  ALLTSNHVLNRVPNRNKDKTPYEIWIGR 610



 Score = 72.4 bits (176), Expect(2) = 2e-79
 Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLL-------DLDS 265
            +KP++SY R W CLA   VP  KK KLGP+ +  +F+GYA +S AYR L       D+  
Sbjct: 610  RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 669

Query: 264  NVIVESRDVEVFENKF---------RSDFKNIDESLQIP-QTETSSNLSSKNVRINPNAF 115
              I+ESRD   FE+ F             + I  S+  P QTE +  L S+      +  
Sbjct: 670  GTIMESRDAIFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEE-----DVS 724

Query: 114  SEHRRSVRVRKEKNLDSDF 58
               RRS R R  K+   DF
Sbjct: 725  EAPRRSKRQRTAKSFGDDF 743


>gb|ABA95768.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1151

 Score =  250 bits (639), Expect(2) = 3e-79
 Identities = 128/268 (47%), Positives = 177/268 (66%), Gaps = 4/268 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINK--DESSNYSCVQSFDFNFNIECTTFNLWHNRLGHV 1038
            ++SK G F+GKGY   G+F+ S++   ++S N+ C    D          N+WH+RL H+
Sbjct: 261  VVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDD--------EANVWHSRLCHI 312

Query: 1037 NYQTMKFMCNNGII-SYSNEHKEKCEVCVQVKMKRKPFPKVD-RQSEILELVHSDICELN 864
            N+  M  + +  +I  +S     KC  CVQ K  RKP    + R   +LEL+HSD+CE+N
Sbjct: 313  NFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLALLELLHSDLCEMN 372

Query: 863  GVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRG 684
            GVLT+GG RYF+T IDD ++F YVYL+K+KD A D F++YK  VE Q  +K+K LRSDRG
Sbjct: 373  GVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRG 432

Query: 683  GEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGE 504
            GE+FS EF  FCE +GI+H+ + PY P+ NG+AERKN  L D+VNAM+  + LP   WGE
Sbjct: 433  GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 492

Query: 503  ALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            ALLT+ HV NRVP++    +PY+I  G+
Sbjct: 493  ALLTSNHVLNRVPNRNKDKTPYEIWIGR 520



 Score = 73.2 bits (178), Expect(2) = 3e-79
 Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
 Frame = -2

Query: 423 KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLL-------DLDS 265
           +KP++SY R W CLA   VP  KK KLGP+ +  +F+GYA +S AYR L       D+  
Sbjct: 520 RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 579

Query: 264 NVIVESRDVEVFENKF---------RSDFKNIDESLQIP-QTETSSNLSSKNVRINPNAF 115
             I+ESRD   FE+ F             + I  S+  P QTE +  L S+      +  
Sbjct: 580 GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEE-----DVS 634

Query: 114 SEHRRSVRVRKEKNLDSDF 58
              RRS R R  K+   DF
Sbjct: 635 EAPRRSKRQRTAKSFGDDF 653


>emb|CAD40198.2| OSJNBb0043H09.7 [Oryza sativa Japonica Group]
          Length = 1302

 Score =  249 bits (635), Expect(2) = 4e-79
 Identities = 127/268 (47%), Positives = 176/268 (65%), Gaps = 4/268 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINK--DESSNYSCVQSFDFNFNIECTTFNLWHNRLGHV 1038
            ++SK G F+GKGY   G+F+ S++   ++S N+ C    D          N+WH+RL H+
Sbjct: 390  VVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDD--------EANVWHSRLCHI 441

Query: 1037 NYQTMKFMCNNGII-SYSNEHKEKCEVCVQVKMKRKPFPKV-DRQSEILELVHSDICELN 864
            N+  M  + +  +I  +S     KC  CVQ K  RKP     +R    LEL+HSD+CE+N
Sbjct: 442  NFGLMSRLSSMCLIPKFSIVKSSKCHSCVQSKQPRKPHKAAKERNLAPLELLHSDLCEMN 501

Query: 863  GVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRG 684
            GVLT+GG RYF+T IDD ++F YVYL+K+KD A D F++YK  +E Q  +K+K LRSDRG
Sbjct: 502  GVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKAEIENQLDRKIKRLRSDRG 561

Query: 683  GEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGE 504
            GE+FS EF  FCE +GI+H+ + PY P+ NG+AERKN  L D+VNAM+  + LP   WGE
Sbjct: 562  GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 503  ALLTACHVHNRVPSKKLKLSPYKI*RGK 420
            ALLT+ HV NRVP++    +PY+I  G+
Sbjct: 622  ALLTSNHVLNRVPNRNKDKTPYEIWIGR 649



 Score = 74.3 bits (181), Expect(2) = 4e-79
 Identities = 51/145 (35%), Positives = 69/145 (47%), Gaps = 23/145 (15%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLL-------DLDS 265
            +KP++SY R W CLA   VP  KK KLGP+ +  +F+GYA +S AYR L       D+  
Sbjct: 649  RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHV 708

Query: 264  NVIVESRDVEVFENKFRSDFKNIDESLQIPQTETSSNLSSKNV--RINPNAFSEH----- 106
              I+ESRD   FE+ F            +  T + SN  S+ +   I P+  +EH     
Sbjct: 709  GTIMESRDATFFESFF-----------PMKDTHSGSNQPSEIIPSSITPSEQTEHTHELV 757

Query: 105  ---------RRSVRVRKEKNLDSDF 58
                     RRS R R  K+   DF
Sbjct: 758  SEEDVSEAPRRSKRQRTAKSFGDDF 782


>emb|CAE01299.2| OSJNBa0020P07.16 [Oryza sativa Japonica Group]
          Length = 1314

 Score =  248 bits (634), Expect(2) = 6e-79
 Identities = 128/268 (47%), Positives = 175/268 (65%), Gaps = 4/268 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINK--DESSNYSCVQSFDFNFNIECTTFNLWHNRLGHV 1038
            ++SK G F+GKGY   G+F+ S++   ++S N+ C    D          N+WH+RL H+
Sbjct: 362  VVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDD--------EANVWHSRLCHI 413

Query: 1037 NYQTMKFMCNNGII-SYSNEHKEKCEVCVQVKMKRKPFPKVD-RQSEILELVHSDICELN 864
            N+  M  + +  +I  +S     KC  CVQ K  RKP    + R    LEL+HSD+CE+N
Sbjct: 414  NFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMN 473

Query: 863  GVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRG 684
            GVLT+GG RYF+TFIDD ++F YVYL+K KD A D F++YK  VE Q  +K+K LRSDRG
Sbjct: 474  GVLTKGGKRYFMTFIDDATRFCYVYLLKKKDEALDYFKIYKAEVENQLDRKIKRLRSDRG 533

Query: 683  GEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGE 504
            GE+FS EF  FCE +GI+H+ + PY P+ NG+AERKN  L D+VNAM+  + LP   WGE
Sbjct: 534  GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNCTLTDLVNAMLDTAGLPKAWWGE 593

Query: 503  ALLTACHVHNRVPSKKLKLSPYKI*RGK 420
             LLT+ HV NRVP++    +PY+I  G+
Sbjct: 594  VLLTSNHVLNRVPNRNKDKTPYEIWIGR 621



 Score = 74.3 bits (181), Expect(2) = 6e-79
 Identities = 52/139 (37%), Positives = 70/139 (50%), Gaps = 17/139 (12%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYR-------LLDLDS 265
            +KP++SY R W CLA   VP  KK KLGP+ +  +F+GYA +S AYR       +LD+  
Sbjct: 621  RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHV 680

Query: 264  NVIVESRDVEVFENKF--------RSDFKNIDESLQIP--QTETSSNLSSKNVRINPNAF 115
             +I+ESRD   FE+ F         +    I  S  IP  QTE +  L S+      +  
Sbjct: 681  GIIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSIIPPEQTEHTHELVSEE-----DVS 735

Query: 114  SEHRRSVRVRKEKNLDSDF 58
               RRS R R  K+   DF
Sbjct: 736  EAPRRSKRQRTAKSFGDDF 754


>gb|AAV24814.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1289

 Score =  250 bits (639), Expect(2) = 6e-79
 Identities = 128/264 (48%), Positives = 175/264 (66%), Gaps = 4/264 (1%)
 Frame = -3

Query: 1211 ILSKAGSFVGKGYVSDGMFKLSINK--DESSNYSCVQSFDFNFNIECTTFNLWHNRLGHV 1038
            ++SK G F+GKGY   G+F+ S++   ++S N+ C    D          N+WH+RL H+
Sbjct: 390  VVSKHGYFIGKGYECGGLFRFSLSDFCNKSVNHICGSVDD--------EANVWHSRLCHI 441

Query: 1037 NYQTMKFMCNNGII-SYSNEHKEKCEVCVQVKMKRKPFPKVD-RQSEILELVHSDICELN 864
            N+  M  + +  +I  +S     KC  CVQ K  RKP    + R    LEL+HSD+CE+N
Sbjct: 442  NFGLMSRLSSMCLIPKFSIVKGSKCHSCVQSKQPRKPHKAAEERNLAPLELLHSDLCEMN 501

Query: 863  GVLTRGGSRYFITFIDDYSKFTYVYLMKSKD*AYDMFQVYKVMVETQKGKKLKILRSDRG 684
            GVLT+GG RYF+TFIDD ++F YVYL+K+KD A D F++YK  VE Q  +K+K LRSDRG
Sbjct: 502  GVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKAEVENQLDRKIKRLRSDRG 561

Query: 683  GEYFSTEFTSFCENNGIVHQVSAPYRPQQNGVAERKNGVLVDMVNAMIVNSNLPMNLWGE 504
            GE+FS EF  FCE +GI+H+ + PY P+ NG+AERKN  L D+VNAM+  + LP   WGE
Sbjct: 562  GEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTDLVNAMLDTAGLPKAWWGE 621

Query: 503  ALLTACHVHNRVPSKKLKLSPYKI 432
            ALLT+ HV NRVP++    +PY+I
Sbjct: 622  ALLTSNHVLNRVPNRNKDKTPYEI 645



 Score = 72.4 bits (176), Expect(2) = 6e-79
 Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
 Frame = -2

Query: 423  KKPNISYFRVWRCLAYYKVPDPKKTKLGPRALKNIFMGYAENSKAYRLL-------DLDS 265
            +KP++SY R W CLA   VP  KK KLGP+ +  +F+GYA +S AYR L       D+  
Sbjct: 649  RKPSLSYLRTWGCLAKVNVPITKKRKLGPKTVDCVFLGYAYHSIAYRFLIVKSEVPDMHV 708

Query: 264  NVIVESRDVEVFENKF---------RSDFKNIDESLQIP-QTETSSNLSSKNVRINPNAF 115
              I+ESRD   FE+ F             + I  S+  P QTE +  L S+      +  
Sbjct: 709  GTIMESRDATFFESFFPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEE-----DVS 763

Query: 114  SEHRRSVRVRKEKNLDSDF 58
               RRS R R  K+   DF
Sbjct: 764  EAPRRSKRQRTAKSFGDDF 782