BLASTX nr result

ID: Atropa21_contig00029279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00029279
         (545 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006348038.1| PREDICTED: pre-mRNA-splicing factor 38B-like...   168   9e-40
ref|XP_004252010.1| PREDICTED: uncharacterized protein LOC101247...   159   5e-37
ref|XP_004252009.1| PREDICTED: uncharacterized protein LOC101247...   159   5e-37
ref|XP_002266542.1| PREDICTED: uncharacterized protein LOC100257...    60   3e-07
gb|EMJ03160.1| hypothetical protein PRUPE_ppa004686mg [Prunus pe...    56   6e-06

>ref|XP_006348038.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Solanum tuberosum]
          Length = 457

 Score =  168 bits (425), Expect = 9e-40
 Identities = 103/189 (54%), Positives = 112/189 (59%), Gaps = 9/189 (4%)
 Frame = -1

Query: 542 RHTDDDDRGYSKLSSHI----RVGNYXXXXXXXXXXXXXDY-PRDIDKHCQDRYEDLGHR 378
           RHTDDDD GYSKLSSH     RV NY              + PRD DKH +DRY DLGHR
Sbjct: 111 RHTDDDDGGYSKLSSHSHRDSRVDNYYGNNSRRDNDHRSRHSPRDTDKHYRDRYGDLGHR 170

Query: 377 RKNWERETXXXXXXXXXXDRVGSGKCYNNSSIGDNRSMESDRYKEY----XXXXXXXXXX 210
            KN ERE+          DRVGSG+ YNNSSI DNRS ESDRYKEY              
Sbjct: 171 SKNQERESSSFKDKDLSFDRVGSGRRYNNSSIDDNRSRESDRYKEYRDSRDEKGHRRSDR 230

Query: 209 SPAYXXXXXXXXXXXXRKDSSVQRLKEADLDGEKYTKEERKNYEDRDKIFEDRNVISGKG 30
           SPAY            RKD  V  +   +LDGEKYTKEERKNYEDR+KIFEDRNV S KG
Sbjct: 231 SPAYEESRSNRNESNSRKDPQVDAM---ELDGEKYTKEERKNYEDREKIFEDRNVASSKG 287

Query: 29  RETPAKKSK 3
           R + +KKSK
Sbjct: 288 RVSLSKKSK 296


>ref|XP_004252010.1| PREDICTED: uncharacterized protein LOC101247793 isoform 2 [Solanum
           lycopersicum]
          Length = 461

 Score =  159 bits (401), Expect = 5e-37
 Identities = 98/193 (50%), Positives = 109/193 (56%), Gaps = 13/193 (6%)
 Frame = -1

Query: 542 RHTDDDDRGYSKLSSHI----RVGNYXXXXXXXXXXXXXDYPRDIDKHCQDRYEDLGHRR 375
           RHTDDDD+GYSKLSSH     RV NY               PRD DKH +DRY D  HR 
Sbjct: 111 RHTDDDDKGYSKLSSHSHHDSRVDNYGNNSRRDNDHRSRHSPRDTDKHYRDRYGDSAHRS 170

Query: 374 KNWERETXXXXXXXXXXDRVGSGKCYNNSSIGDNRSMESDRYKEY--------XXXXXXX 219
           KN ERE           DRVGSG+ YN+SSI DNRS ESDRYKEY               
Sbjct: 171 KNQEREASSFKDKDLSFDRVGSGRRYNSSSIDDNRSRESDRYKEYRDSRDEKGNRSSDHK 230

Query: 218 XXXSPAYXXXXXXXXXXXXRKDSSVQRLKEADLDGEKYTKEERKNYEDRDKIFEDRNVIS 39
              SPAY            RK+  V  +   +LDG+KYTKEERKNYEDR+KIF DRNV S
Sbjct: 231 SDRSPAYEESRSNRNESNSRKEPQVDAM---ELDGKKYTKEERKNYEDREKIFADRNVAS 287

Query: 38  GKGR-ETPAKKSK 3
            KGR  +P+KKSK
Sbjct: 288 SKGRVSSPSKKSK 300


>ref|XP_004252009.1| PREDICTED: uncharacterized protein LOC101247793 isoform 1 [Solanum
           lycopersicum]
          Length = 510

 Score =  159 bits (401), Expect = 5e-37
 Identities = 98/193 (50%), Positives = 109/193 (56%), Gaps = 13/193 (6%)
 Frame = -1

Query: 542 RHTDDDDRGYSKLSSHI----RVGNYXXXXXXXXXXXXXDYPRDIDKHCQDRYEDLGHRR 375
           RHTDDDD+GYSKLSSH     RV NY               PRD DKH +DRY D  HR 
Sbjct: 111 RHTDDDDKGYSKLSSHSHHDSRVDNYGNNSRRDNDHRSRHSPRDTDKHYRDRYGDSAHRS 170

Query: 374 KNWERETXXXXXXXXXXDRVGSGKCYNNSSIGDNRSMESDRYKEY--------XXXXXXX 219
           KN ERE           DRVGSG+ YN+SSI DNRS ESDRYKEY               
Sbjct: 171 KNQEREASSFKDKDLSFDRVGSGRRYNSSSIDDNRSRESDRYKEYRDSRDEKGNRSSDHK 230

Query: 218 XXXSPAYXXXXXXXXXXXXRKDSSVQRLKEADLDGEKYTKEERKNYEDRDKIFEDRNVIS 39
              SPAY            RK+  V  +   +LDG+KYTKEERKNYEDR+KIF DRNV S
Sbjct: 231 SDRSPAYEESRSNRNESNSRKEPQVDAM---ELDGKKYTKEERKNYEDREKIFADRNVAS 287

Query: 38  GKGR-ETPAKKSK 3
            KGR  +P+KKSK
Sbjct: 288 SKGRVSSPSKKSK 300


>ref|XP_002266542.1| PREDICTED: uncharacterized protein LOC100257160 [Vitis vinifera]
           gi|297739954|emb|CBI30136.3| unnamed protein product
           [Vitis vinifera]
          Length = 510

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 40/217 (18%)
 Frame = -1

Query: 533 DDDDRGYSKLSSHI----RVGNYXXXXXXXXXXXXXD-YPRDIDKHCQDRYEDLGHRRKN 369
           D+ DR +  LSS      RVGNY               Y R  DK+ +D++++ G+R K+
Sbjct: 124 DEGDRDHHNLSSRSGRESRVGNYSDHVRQESEHSRTRDYFRGTDKYSRDKHDNAGYRSKD 183

Query: 368 WERETXXXXXXXXXXD-----RVGSGKCYNNSSIGDNRSMESDRY----------KEYXX 234
            E+ET                R GSG+ + NS+  D+++ E D++          K+Y  
Sbjct: 184 KEKETSSLEHQKYKDKDLSSDRAGSGRRHTNSNFEDSKAGEQDKHLRDGDGPDERKDYRR 243

Query: 233 XXXXXXXXSP-AYXXXXXXXXXXXXRKDSSVQRLKEA------DLDGEKYTKEERKNYE- 78
                      ++             +DS   R KE       ++DG+K  K+E+K Y+ 
Sbjct: 244 GLGDYKSDRSISHEESRGHRNDSTSGRDSGGYRSKEVHKNEPKEVDGQKQPKDEKKKYDE 303

Query: 77  ---DRDK---------IFEDRNVISGKGRETPAKKSK 3
              DR K          FED+ V++ + +E+ AKK K
Sbjct: 304 WKTDRHKDRYNRESREQFEDKTVVASENQESAAKKPK 340


>gb|EMJ03160.1| hypothetical protein PRUPE_ppa004686mg [Prunus persica]
          Length = 496

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 50/211 (23%), Positives = 89/211 (42%), Gaps = 31/211 (14%)
 Frame = -1

Query: 542 RHTDDDDRGYSKLSSHIRVGNYXXXXXXXXXXXXXDYPRDIDKHCQDRYEDLGHRRKNWE 363
           +H D++D+ Y KLSS  R G               +Y R++DK+ +D+Y+  G+R K+ +
Sbjct: 119 KHADEEDKNYQKLSS--RSGRESRGSAYYDHIKSREYSRNLDKYSRDKYDGSGYRNKDKD 176

Query: 362 RET-----XXXXXXXXXXDRVGSGKCYNN----SSIGDNRSME---SDRYKEYXXXXXXX 219
           RE+                RVGSG+ + +        D  +++    D  K+Y       
Sbjct: 177 RESSFPENQKYKDKDSSSQRVGSGRRHGHFEEMERERDRHALDRDVQDEKKDYRRNSGDY 236

Query: 218 XXXSP-AYXXXXXXXXXXXXRKDSSVQRLKEA------DLDGEKYTKEERKNYEDRDKIF 60
                 +Y            R+D    R+KE       +LD +  +KE+RK Y+D++  +
Sbjct: 237 ISERIFSYEESKGQRSDSISRRDEGKHRMKEGYKSELKELDDDNVSKEQRKKYDDKETSW 296

Query: 59  ------------EDRNVISGKGRETPAKKSK 3
                        D++ I  + +E+ AK+ K
Sbjct: 297 GNRITRETSERSADKHYIKSENQESTAKRPK 327


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