BLASTX nr result

ID: Atropa21_contig00029265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00029265
         (620 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338240.1| PREDICTED: dof zinc finger protein DOF3.4-li...   157   2e-36
ref|XP_004232067.1| PREDICTED: dof zinc finger protein DOF3.4-li...   146   5e-33
ref|XP_003632455.1| PREDICTED: dof zinc finger protein DOF3.4-li...    79   1e-12
gb|ESW27971.1| hypothetical protein PHAVU_003G248500g [Phaseolus...    71   2e-10
ref|XP_003548014.1| PREDICTED: dof zinc finger protein DOF3.4 [G...    67   5e-09
gb|EOX91284.1| Dof-type zinc finger DNA-binding family protein, ...    66   9e-09
ref|XP_002310762.1| DNA binding with one finger 5 family protein...    66   9e-09
ref|XP_004509184.1| PREDICTED: dof zinc finger protein DOF3.4-li...    65   1e-08
ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [G...    65   2e-08
ref|XP_002522358.1| zinc finger protein, putative [Ricinus commu...    64   4e-08
dbj|BAC81662.1| DNA binding with one finger 5 protein [Pisum sat...    62   1e-07
ref|XP_004509185.1| PREDICTED: dof zinc finger protein DOF3.4-li...    58   2e-06

>ref|XP_006338240.1| PREDICTED: dof zinc finger protein DOF3.4-like [Solanum tuberosum]
          Length = 240

 Score =  157 bits (398), Expect = 2e-36
 Identities = 82/126 (65%), Positives = 88/126 (69%), Gaps = 1/126 (0%)
 Frame = +1

Query: 1   FLVPLTADHHGGSLPFDVKPSVNMCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXIEDLGF 180
           FLVPLTADH GGSLPFDVKPSVNMCGSFTSLLSS Q                  IED+GF
Sbjct: 116 FLVPLTADH-GGSLPFDVKPSVNMCGSFTSLLSSAQGPGGLLALGGFGLGVGSGIEDMGF 174

Query: 181 GLGRPLWPFPGVTHSSVDHNNNGAAASTLETMWQL-XXXXXXXXXXXXEIFNFPDLAIST 357
           GLGRP+WPFPGV+H+SVD+NNNGA AS   + WQL             EIFNFPDLAIST
Sbjct: 175 GLGRPIWPFPGVSHNSVDNNNNGAGASIFGSTWQLASGGEGGFVGAGGEIFNFPDLAIST 234

Query: 358 HGNGMK 375
           HGNGMK
Sbjct: 235 HGNGMK 240


>ref|XP_004232067.1| PREDICTED: dof zinc finger protein DOF3.4-like [Solanum
           lycopersicum]
          Length = 234

 Score =  146 bits (368), Expect = 5e-33
 Identities = 80/127 (62%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
 Frame = +1

Query: 1   FLVPLTADHHGGSLPFDVKPSVNMCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXIEDLGF 180
           FLVPLTADH GGSLPFDVKPSVNMCGSFTSLLSS Q                  +ED+GF
Sbjct: 113 FLVPLTADH-GGSLPFDVKPSVNMCGSFTSLLSSAQ----GPGGLLALGGFGLGVEDMGF 167

Query: 181 GLGRPLWPFPGVTH-SSVDHNNNGAAASTLETMWQL-XXXXXXXXXXXXEIFNFPDLAIS 354
           GLGRP+WPFPGV+H +SVD+N+NGA AS   + WQL             EIFNFPDLAIS
Sbjct: 168 GLGRPIWPFPGVSHNTSVDNNSNGAGASMYGSTWQLASGGEGGFVGAGGEIFNFPDLAIS 227

Query: 355 THGNGMK 375
           THGNGMK
Sbjct: 228 THGNGMK 234


>ref|XP_003632455.1| PREDICTED: dof zinc finger protein DOF3.4-like [Vitis vinifera]
           gi|147810110|emb|CAN75830.1| hypothetical protein
           VITISV_039634 [Vitis vinifera]
          Length = 220

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 48/119 (40%), Positives = 60/119 (50%), Gaps = 2/119 (1%)
 Frame = +1

Query: 25  HHGGSLPF--DVKPSVNMCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXIEDLGFGLGRPL 198
           +H  S+PF  DVKP+VN+CGSFTSLL++                     ED+GFGLGR +
Sbjct: 107 NHATSMPFVGDVKPTVNVCGSFTSLLNTQ--GPGFLALGGFGLGLGPGFEDMGFGLGRGV 164

Query: 199 WPFPGVTHSSVDHNNNGAAASTLETMWQLXXXXXXXXXXXXEIFNFPDLAISTHGNGMK 375
           WPFPG           G  A    T WQ             + F++PDLAIST GNG+K
Sbjct: 165 WPFPGAGDGGASGGTGGGTALVGNT-WQF--ESGEGGFVAGDCFSWPDLAISTPGNGLK 220


>gb|ESW27971.1| hypothetical protein PHAVU_003G248500g [Phaseolus vulgaris]
          Length = 233

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 48/128 (37%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
 Frame = +1

Query: 7   VPLTADHHGGSLPF-----DVKPSVNMCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXIED 171
           VP T    GGS+ F     + + +VN+CGSFTSLL++TQ                   ED
Sbjct: 114 VPTT---QGGSMHFMDGDVNKQNNVNVCGSFTSLLNNTQGNNGFLALGGFGLGLGHGFED 170

Query: 172 LGFGLGRPLWPFPGVTHSSVDHNNNGAAASTLETMWQLXXXXXXXXXXXXEIFNFPDLAI 351
           +GFG+GR  W FPG+   +   N  GA  S+  + WQL            + F++P LAI
Sbjct: 171 MGFGIGRSGWGFPGMVDGA---NIGGAVPSSGLSTWQL--ESGEGGFVSGDCFSWPGLAI 225

Query: 352 STHGNGMK 375
           ST GNG+K
Sbjct: 226 STPGNGLK 233


>ref|XP_003548014.1| PREDICTED: dof zinc finger protein DOF3.4 [Glycine max]
          Length = 236

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 47/125 (37%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
 Frame = +1

Query: 4   LVPLTADHHGGSLPFDVKPSVNMCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXIEDLGFG 183
           L P+TA  H G      + + N CGS+TSLL++TQ                   +D+GFG
Sbjct: 119 LAPVTAATHFGHDGDVKQTNGNACGSYTSLLNNTQGSGFFALGGFGLGLGHG-FDDMGFG 177

Query: 184 LGRPLWPFPGVTHSSVDHNN-NGAAASTLETMWQLXXXXXXXXXXXXEIFNFPDLAISTH 360
           +GR  W FPG+    VD+ N  GA AS+    WQL            + F++P LAIST 
Sbjct: 178 IGRSGWAFPGM----VDNGNIGGAIASSGVNTWQL--ESGEGGFVGGDCFSWPGLAISTP 231

Query: 361 GNGMK 375
           GNG+K
Sbjct: 232 GNGLK 236


>gb|EOX91284.1| Dof-type zinc finger DNA-binding family protein, putative
           [Theobroma cacao]
          Length = 237

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 38/103 (36%), Positives = 53/103 (51%)
 Frame = +1

Query: 67  NMCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXIEDLGFGLGRPLWPFPGVTHSSVDHNNN 246
           N+CGSFTSLL++                    +ED+GFGLGR +WPF G+   +     N
Sbjct: 139 NICGSFTSLLNTQ--GPGFLALGGFGLGIGPGLEDVGFGLGRGMWPFSGMGDGAAAVGGN 196

Query: 247 GAAASTLETMWQLXXXXXXXXXXXXEIFNFPDLAISTHGNGMK 375
            +AA+ +   WQ             + F++PDLAIST GNG+K
Sbjct: 197 VSAANGMGNTWQF--ESGETGFVGGDCFSWPDLAISTPGNGLK 237


>ref|XP_002310762.1| DNA binding with one finger 5 family protein [Populus trichocarpa]
           gi|222853665|gb|EEE91212.1| DNA binding with one finger
           5 family protein [Populus trichocarpa]
          Length = 248

 Score = 65.9 bits (159), Expect = 9e-09
 Identities = 52/132 (39%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
 Frame = +1

Query: 4   LVPLTAD-----HHGGSLPFDVKPSVN-MCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXI 165
           L+PLTA+     H GG    D K +   + GSFTSLL+ TQ                  I
Sbjct: 122 LLPLTANQGLSVHFGGG---DGKGNGGGLGGSFTSLLN-TQGPAGFLALNGFGLGIGPGI 177

Query: 166 EDLGFGLGRPLWPFPGVTHSSVDHNNNGAAAST--LETMWQLXXXXXXXXXXXXEIFNFP 339
           ED+ F LGR LWPFPG+         NG AA T  L   WQ             + F++P
Sbjct: 178 EDVNFALGRGLWPFPGMGDVGASVGGNGGAAVTAGLGNTWQF-ENGQENGFVGGDCFSWP 236

Query: 340 DLAISTHGNGMK 375
           DLAIST GNG+K
Sbjct: 237 DLAISTPGNGLK 248


>ref|XP_004509184.1| PREDICTED: dof zinc finger protein DOF3.4-like [Cicer arietinum]
          Length = 303

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
 Frame = +1

Query: 4   LVPLTADHHGGSLPF------DVKPSVNMCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXI 165
           + P++A   GGSLPF      D K ++++CGSFTSLL++                    +
Sbjct: 185 MAPISAAQ-GGSLPFGGGIDGDGKQNMSVCGSFTSLLNNN----VQNSGFLALGGFGLGL 239

Query: 166 EDLGFGLGRPLWPFPGVTHSSVDHNNNGAAASTLETMWQLXXXXXXXXXXXXEIFNFPDL 345
           E++GFG+GR  W FPG+   S     N   +S +   WQL            + F++P L
Sbjct: 240 EEMGFGIGRAGWGFPGMVEGS-----NMGVSSGIGNTWQL-EGGEGGFVGAADCFSWPGL 293

Query: 346 AISTHGNGMK 375
           AIST GNG K
Sbjct: 294 AISTQGNGFK 303


>ref|XP_003518090.1| PREDICTED: dof zinc finger protein DOF3.4 [Glycine max]
          Length = 234

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
 Frame = +1

Query: 4   LVPLTADHHGGSLPFDVKPSVN----MCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXIED 171
           L P+ + H+G  L  DVK + N    +CGSFTSLL++T                    +D
Sbjct: 116 LAPVASTHYG-VLDGDVKQTSNGNGNVCGSFTSLLNNTHGSGFLALGGFGLGHGY---DD 171

Query: 172 LGFGLGRPLWPFPGVTHSSVDHNNNGAAASTLETMWQLXXXXXXXXXXXXEIFNFPDLAI 351
           +GFG+GR  W FPG+       N  GA AS+    WQL            + F +P LAI
Sbjct: 172 MGFGIGRSGWAFPGMVDGG---NIGGAVASSGLNTWQL--ESGEGGFVSGDCFAWPGLAI 226

Query: 352 STHGNGMK 375
           ST GNG+K
Sbjct: 227 STPGNGLK 234


>ref|XP_002522358.1| zinc finger protein, putative [Ricinus communis]
           gi|223538436|gb|EEF40042.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 245

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 44/134 (32%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
 Frame = +1

Query: 4   LVPLTADH----HGGSLPFDVKPSVNMCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXIED 171
           LVPL A+      G     +   +  +CGSFTSLL++                     ED
Sbjct: 114 LVPLMANQGQFIDGKGNGNNTTANSTVCGSFTSLLNTQ--GPGFLALGGFGLGLGTGFED 171

Query: 172 LGFGLGRPLWPFPGVTHSSVD----HNNN--GAAASTLETMWQLXXXXXXXXXXXXEIFN 333
           +GFGLGR +WPFPGV          H  +  G A + +   W              + F+
Sbjct: 172 VGFGLGRGVWPFPGVGDGGASLGGGHGGSVGGGAVTGMSNTWHFEGGAENGFVGAGDCFS 231

Query: 334 FPDLAISTHGNGMK 375
           +PDLAIST GNG+K
Sbjct: 232 WPDLAISTPGNGLK 245


>dbj|BAC81662.1| DNA binding with one finger 5 protein [Pisum sativum]
          Length = 234

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
 Frame = +1

Query: 31  GGSLPF-----DVKPSVNMCGSFTSLLSST-QXXXXXXXXXXXXXXXXXXIEDLGFGLGR 192
           GGS P+     + K ++++CGSFTSLL++  Q                  + D+GFG+GR
Sbjct: 117 GGSFPYGGVDGEGKQNMSVCGSFTSLLNNNPQQNSGFLALGGFGLGLGHGLGDMGFGIGR 176

Query: 193 PLWPFPGVTHSSVDHNNNGA--AASTLETMWQLXXXXXXXXXXXXEIFNFPDLAISTHGN 366
             W FPG+    +D +N G    +S +   WQL            + F++P LAIST GN
Sbjct: 177 E-WSFPGM----MDGSNMGVPVVSSGIGNSWQLEGGETGFVGGGGDCFSWPGLAISTPGN 231

Query: 367 GMK 375
           G+K
Sbjct: 232 GLK 234


>ref|XP_004509185.1| PREDICTED: dof zinc finger protein DOF3.4-like [Cicer arietinum]
          Length = 225

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
 Frame = +1

Query: 4   LVPLTADHHGGSLPF------DVKPSVNMCGSFTSLLSSTQXXXXXXXXXXXXXXXXXXI 165
           + P++A   GGSLPF      + K +V+ CGSFTSLL++                    +
Sbjct: 109 MAPISAAQ-GGSLPFGGGIDGEGKQNVSGCGSFTSLLNNN------VQNSGFLALGGFGL 161

Query: 166 EDLGFGLGRPLWPFPGVTHSSVDHNNNGAAASTLETMWQLXXXXXXXXXXXXEIFNFPDL 345
            ++GFG+GR  W FPG+    VD +N G  +S +   WQL            + F++P L
Sbjct: 162 GEMGFGIGRAGWGFPGM----VDGSNMG-VSSGIGNTWQL-EGGEGGFVGAADCFSWPGL 215

Query: 346 AISTHGNGMK 375
           AIST GN +K
Sbjct: 216 AISTPGNVLK 225


Top