BLASTX nr result
ID: Atropa21_contig00029196
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00029196
(1077 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006342572.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol... 339 1e-90
ref|XP_004252797.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol... 276 1e-71
ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol... 163 1e-37
ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Sol... 148 3e-33
ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vit... 114 7e-23
emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera] 114 9e-23
ref|XP_006473637.1| PREDICTED: 5'-3' exoribonuclease 3-like isof... 89 2e-15
ref|XP_006473636.1| PREDICTED: 5'-3' exoribonuclease 3-like isof... 89 2e-15
gb|EXC00968.1| 5'-3' exoribonuclease 3 [Morus notabilis] 88 5e-15
ref|XP_006435155.1| hypothetical protein CICLE_v10000087mg [Citr... 86 2e-14
ref|XP_006435154.1| hypothetical protein CICLE_v10000087mg [Citr... 86 2e-14
gb|EMJ26606.1| hypothetical protein PRUPE_ppa000605mg [Prunus pe... 82 4e-13
ref|XP_002306919.2| EXORIBONUCLEASE 2 family protein [Populus tr... 81 8e-13
gb|EOY14997.1| 5'-3' exoribonuclease 3 isoform 2 [Theobroma cacao] 79 3e-12
gb|EOY14996.1| 5'-3' exoribonuclease 3 isoform 1 [Theobroma cacao] 79 3e-12
ref|XP_004291380.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fra... 75 4e-11
ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc... 74 8e-11
ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cuc... 74 8e-11
ref|XP_004967802.1| PREDICTED: 5'-3' exoribonuclease 3-like isof... 71 8e-10
ref|XP_004967801.1| PREDICTED: 5'-3' exoribonuclease 3-like isof... 71 8e-10
>ref|XP_006342572.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum tuberosum]
Length = 1117
Score = 339 bits (870), Expect = 1e-90
Identities = 169/234 (72%), Positives = 184/234 (78%), Gaps = 21/234 (8%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXH----------------RGAISDRQLGEAAHRLVVNSLHTKEDRG- 878
KKPWENGRN RGA+S QLGEAAHRLVVNSL KEDRG
Sbjct: 871 KKPWENGRNRHRGAMSGRNHHRDAMSGRNHHRGAMSGLQLGEAAHRLVVNSLQKKEDRGG 930
Query: 877 HGDYRRAYNGQGHGDYIHAQPASYPAAHGPHVPSFQTQRYNVHENVRPSFGHSARDAGHH 698
+GD+RR +NGQGHG+Y+HAQPASY AA+GP +PSF+T R NVHEN+RPSFGHSARDAGHH
Sbjct: 931 NGDHRRTHNGQGHGNYMHAQPASYHAAYGPPIPSFETPRNNVHENIRPSFGHSARDAGHH 990
Query: 697 PRSHY--EHGSRGGRPV--THSRDYRGHGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPP 530
PRS +H S+ RP T SRDYRGHGHHTDGMQQNG HS+SSYASHPQHVGQIPVPP
Sbjct: 991 PRSSGSDDHSSKS-RPFHETRSRDYRGHGHHTDGMQQNGAHSHSSYASHPQHVGQIPVPP 1049
Query: 529 TTNFHQQSGYNTSTRYEPYGAGSYNQRGGGRASQNQNVRGYHHPHPSGNQFSAF 368
TT+FHQQSGY+ ST YEP GA SYNQRGGGRASQ QN RGYHHPHPSGNQFSAF
Sbjct: 1050 TTSFHQQSGYDASTSYEPRGAESYNQRGGGRASQKQNGRGYHHPHPSGNQFSAF 1103
>ref|XP_004252797.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum lycopersicum]
Length = 1116
Score = 276 bits (706), Expect = 1e-71
Identities = 149/240 (62%), Positives = 171/240 (71%), Gaps = 25/240 (10%)
Frame = -3
Query: 1012 TRKKPWENGRNXXXXXHRGAISDR--------------------QLGEAAHRLVVNSLHT 893
+ KKPWE+GRN RGA+SDR QLGEAA RLVVNSL
Sbjct: 869 SNKKPWEDGRNRH----RGAMSDRDHHRDAMSDRNIQCGAMSGFQLGEAARRLVVNSLQK 924
Query: 892 KEDRG-HGDYRRAYNGQGHGDYIHAQPASYPAAHGPHVPSFQTQRYNVHENVRPSFGHSA 716
KEDRG +GD+RR +NGQG +Y+HA+PAS AA+GP VPSF+T N HEN++PSF HSA
Sbjct: 925 KEDRGGNGDHRRPHNGQGRDNYMHARPASCRAAYGPPVPSFETPSNNAHENIQPSFVHSA 984
Query: 715 RDAGHHPRSH--YEHGSRGGRPV--THSRDYRGHGHHTDGMQQNGGHSYSSYASHPQHVG 548
+D G +PRS +H S+ RP THSRDYRGHGHHT MQQNG HS+SSYASHPQHVG
Sbjct: 985 QDPGRYPRSSGSNDHSSKS-RPYHETHSRDYRGHGHHTYKMQQNGAHSHSSYASHPQHVG 1043
Query: 547 QIPVPPTTNFHQQSGYNTSTRYEPYGAGSYNQRGGGRASQNQNVRGYHHPHPSGNQFSAF 368
QIPVPPTT FHQQSG + S YEP GA SYNQ+GGGRAS+NQN GY P+ SGNQFSAF
Sbjct: 1044 QIPVPPTTIFHQQSGNDVSMSYEPRGAESYNQQGGGRASRNQNGTGY-QPYSSGNQFSAF 1102
>ref|XP_006342032.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum tuberosum]
Length = 1099
Score = 163 bits (413), Expect = 1e-37
Identities = 107/252 (42%), Positives = 125/252 (49%), Gaps = 40/252 (15%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSLHTKEDRGHGDYRRAYNGQGHGDYI 827
+KPWENGRN G S R LGEAAHRLV NSL + G GD +
Sbjct: 855 RKPWENGRNHHP----GGNSGRHLGEAAHRLVSNSLQIRS--------------GRGDNL 896
Query: 826 HAQPASYPAAHGPHVPSFQTQRYNVHENVRPSFGHSARD---------AGHHPR------ 692
HAQP YP+ P +Q YN +VRP+F +SARD +HP
Sbjct: 897 HAQPVPYPSGPFP-----SSQGYNGQGHVRPNFDYSARDDTAAPYQYDQSYHPAYIPTAV 951
Query: 691 SHYEHG----SRGGRPVTHSRDYRGHGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPTT 524
Y GG+PV SRDY HGHH QQN G+SYSS+A+ PQHV Q PVPP
Sbjct: 952 DPYSRAPPLYETGGQPVPPSRDYHRHGHHAAVTQQNVGYSYSSHANRPQHVSQSPVPPID 1011
Query: 523 NFHQQSGYNTSTRYE-------------------PYGAGSYNQRGGGRASQ-NQNV-RGY 407
+FHQQS Y++ Y PY GSYN + GG A Q NQN RGY
Sbjct: 1012 HFHQQSRYSSYPNYHEPYEPGSYHPPYEPGSYNPPYEPGSYNPQDGGWAPQVNQNAGRGY 1071
Query: 406 HHPHPSGNQFSA 371
+P PS N FSA
Sbjct: 1072 GNPRPSSNHFSA 1083
>ref|XP_004238343.1| PREDICTED: 5'-3' exoribonuclease 3-like [Solanum lycopersicum]
Length = 1109
Score = 148 bits (374), Expect = 3e-33
Identities = 101/253 (39%), Positives = 119/253 (47%), Gaps = 41/253 (16%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSLHTKEDRGHGDYRRAYNGQGHGDYI 827
+KPWENGRN G S R LGEAAHRLV NSL + G GD +
Sbjct: 864 RKPWENGRNHHP----GGNSGRHLGEAAHRLVSNSLQIRS--------------GRGDNL 905
Query: 826 HAQPASYPAAHGPHVPSFQTQRYNVHENVRPSFGHSARDA----------GHHPR----- 692
HAQP YP+ P +Q YN +VRP+F +SARD +HP
Sbjct: 906 HAQPGPYPSGPFP-----SSQGYNGQGHVRPNFDYSARDETAAAPYQYDQSYHPAYIPAA 960
Query: 691 -SHYEHG----SRGGRPVTHSRDYRGHGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPT 527
Y GG+P SRDY HGH QQN G+SYSS+ + QHV Q PVPP
Sbjct: 961 VDPYSRAPPLYEMGGQPAPPSRDYHRHGHQAAVTQQNVGYSYSSHTNRQQHVSQSPVPPI 1020
Query: 526 TNFHQQSGYNTSTRYE-------------------PYGAGSYNQRGGGRASQ-NQNV-RG 410
+FHQQS Y++ Y PY G YN + G A Q NQN RG
Sbjct: 1021 DHFHQQSRYSSYPNYHEPYEPGSYHPPYEPVSYHPPYEPGPYNPQDGVWAPQVNQNAGRG 1080
Query: 409 YHHPHPSGNQFSA 371
Y +P PS N FSA
Sbjct: 1081 YGNPRPSSNHFSA 1093
>ref|XP_002280236.2| PREDICTED: 5'-3' exoribonuclease 3-like [Vitis vinifera]
Length = 1065
Score = 114 bits (285), Expect = 7e-23
Identities = 83/241 (34%), Positives = 110/241 (45%), Gaps = 30/241 (12%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSLHTKEDRGHGDYRRAYNGQGHGDYI 827
++PWENGR G IS RQLGEAAHRLVVNSL K +R G GD +
Sbjct: 832 RRPWENGRQNLP----GTISGRQLGEAAHRLVVNSLQVKAER-----------NGFGDQM 876
Query: 826 HAQPASYPAA-HGPHVPSFQTQRYNVHEN-----VRPSFGHSARDAGHHP---RSHYEHG 674
HA P YPAA +GP + S+ RY+ E+ RP + +P R+H++H
Sbjct: 877 HA-PPPYPAAPYGPPLSSYSDNRYHNQEHHRMALPRPDYSDQTYRRSSNPASVRNHFDH- 934
Query: 673 SRGGRPVTHSRDYRG--------HGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPTTNF 518
R +P H+ G HG++ G QN G Y HP+ Q +P
Sbjct: 935 -RYDQP--HASSATGHHYNRSPVHGYYQPGFHQNDGPGY-----HPRQEAQTHIPAGAQL 986
Query: 517 HQQSGYNTSTRYEPYGAGSYNQRGGGRASQNQ-------------NVRGYHHPHPSGNQF 377
Q G+N+ Y+ YGA SY++ G + N RGY HP GNQ+
Sbjct: 987 PGQGGHNSHHGYQSYGASSYHEWASGWPPEGNNQSNPRGHGHPQGNPRGYGHPQQLGNQY 1046
Query: 376 S 374
S
Sbjct: 1047 S 1047
>emb|CAN82967.1| hypothetical protein VITISV_021856 [Vitis vinifera]
Length = 500
Score = 114 bits (284), Expect = 9e-23
Identities = 83/241 (34%), Positives = 110/241 (45%), Gaps = 30/241 (12%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSLHTKEDRGHGDYRRAYNGQGHGDYI 827
++PWENGR G IS RQLGEAAHRLVVNSL K +R G GD +
Sbjct: 267 RRPWENGRQNLP----GTISGRQLGEAAHRLVVNSLQVKAER-----------NGFGDQM 311
Query: 826 HAQPASYPAA-HGPHVPSFQTQRYNVHEN-----VRPSFGHSARDAGHHP---RSHYEHG 674
HA P YPAA +GP + S+ RY+ E+ RP + +P R+H++H
Sbjct: 312 HA-PPPYPAAPYGPPLSSYSDNRYHNQEHHRMALPRPDYSDQTYRRSSNPASVRNHFDH- 369
Query: 673 SRGGRPVTHSRDYRG--------HGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPTTNF 518
R +P H+ G HG++ G QN G Y HP+ Q +P
Sbjct: 370 -RYDQP--HASSATGHHYNRSPVHGYYQPGFHQNDGPGY-----HPRQEAQTHIPAGAXL 421
Query: 517 HQQSGYNTSTRYEPYGAGSYNQRGGGRASQNQ-------------NVRGYHHPHPSGNQF 377
Q G+N+ Y+ YGA SY++ G + N RGY HP GNQ+
Sbjct: 422 PGQGGHNSHHGYQSYGASSYHEWASGWPPEGNNQSNPRGHGHPQGNPRGYGHPQQLGNQY 481
Query: 376 S 374
S
Sbjct: 482 S 482
>ref|XP_006473637.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Citrus sinensis]
Length = 1120
Score = 89.4 bits (220), Expect = 2e-15
Identities = 90/262 (34%), Positives = 109/262 (41%), Gaps = 37/262 (14%)
Frame = -3
Query: 1060 IVSLEKL---PIDWWLIVCTRKKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSL-HT 893
IV LE L P+ W + ++P ENGR+ G IS RQLGEAAHRLV NSL H
Sbjct: 815 IVQLEDLKPAPVLWH--EDSGRRPHENGRHNP----HGTISGRQLGEAAHRLVANSLQHM 868
Query: 892 KEDRGHGDYRRAYNGQGHGDYIHAQPASYPAA-HGPHVPSFQ-----TQRYNVHENVRPS 731
K DR G+GD +H P Y AA + P VPS+Q Q YN R
Sbjct: 869 KVDR-----------NGYGDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTD 917
Query: 730 ---FGHS-------------------ARDAGHHP--RSH--YEHGSRGGRPVTHSRDYRG 629
GHS A + HHP R H Y+ S G P
Sbjct: 918 SYPAGHSQSSISAAQPPYDGGYSQHYASNTSHHPNRRYHPQYDRNSSGEHPT-------- 969
Query: 628 HGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPTTNFHQQSGYNTSTRYEPYGAGSYNQR 449
H ++ G+ QNGG Y P G PP Q GY + Y+ AGS+NQ
Sbjct: 970 HLYNPSGIHQNGGPRYPPRPMGPTSSGANLYPP------QGGY---SGYQSPAAGSFNQW 1020
Query: 448 GGGRASQNQNV-RGYHHPHPSG 386
GG S + +G HH G
Sbjct: 1021 GGANQSMPRGYGQGQHHQRRDG 1042
>ref|XP_006473636.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X1 [Citrus sinensis]
Length = 1123
Score = 89.4 bits (220), Expect = 2e-15
Identities = 90/262 (34%), Positives = 109/262 (41%), Gaps = 37/262 (14%)
Frame = -3
Query: 1060 IVSLEKL---PIDWWLIVCTRKKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSL-HT 893
IV LE L P+ W + ++P ENGR+ G IS RQLGEAAHRLV NSL H
Sbjct: 818 IVQLEDLKPAPVLWH--EDSGRRPHENGRHNP----HGTISGRQLGEAAHRLVANSLQHM 871
Query: 892 KEDRGHGDYRRAYNGQGHGDYIHAQPASYPAA-HGPHVPSFQ-----TQRYNVHENVRPS 731
K DR G+GD +H P Y AA + P VPS+Q Q YN R
Sbjct: 872 KVDR-----------NGYGDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTD 920
Query: 730 ---FGHS-------------------ARDAGHHP--RSH--YEHGSRGGRPVTHSRDYRG 629
GHS A + HHP R H Y+ S G P
Sbjct: 921 SYPAGHSQSSISAAQPPYDGGYSQHYASNTSHHPNRRYHPQYDRNSSGEHPT-------- 972
Query: 628 HGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPTTNFHQQSGYNTSTRYEPYGAGSYNQR 449
H ++ G+ QNGG Y P G PP Q GY + Y+ AGS+NQ
Sbjct: 973 HLYNPSGIHQNGGPRYPPRPMGPTSSGANLYPP------QGGY---SGYQSPAAGSFNQW 1023
Query: 448 GGGRASQNQNV-RGYHHPHPSG 386
GG S + +G HH G
Sbjct: 1024 GGANQSMPRGYGQGQHHQRRDG 1045
>gb|EXC00968.1| 5'-3' exoribonuclease 3 [Morus notabilis]
Length = 1082
Score = 88.2 bits (217), Expect = 5e-15
Identities = 79/255 (30%), Positives = 108/255 (42%), Gaps = 43/255 (16%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSLHTKEDRGHGDYRRAYNGQGHGDYI 827
++ +ENGR +S R LGEAA RLVVNSL K DR G+ + +
Sbjct: 828 RRHFENGRQNHSRD----LSGRHLGEAATRLVVNSLQVKADR-----------NGYCNPM 872
Query: 826 HAQPASYPAA-HGPHVPSFQTQRYN--VHENVRP------------SFGHSARDAGHHPR 692
H P YP A H S+ QR++ H + P S S D G++ R
Sbjct: 873 HVHPPPYPGAQHTQFQSSYGNQRFHDQGHHRMPPRGTFHPPEVQFQSSNQSYGDRGYNER 932
Query: 691 SHY--EHGSRGGRPVTHSRDYRGHGHHTDGMQQNGGHSYSSYASHPQH------------ 554
+Y H S R H + ++ Q HS+S+ + HPQ+
Sbjct: 933 HNYSDRHASSAHR---HPHNGSQSNYYDRSNQMPSQHSHSTNSRHPQYQSGSHHNVGPMY 989
Query: 553 ----VGQIPVPPTTNFHQQSGYNTSTRYEPYGAGSYNQRGGGRASQ---------NQNV- 416
+GQ P+ + + QSGYN Y+P GA + RG G QNV
Sbjct: 990 PRGPIGQTPLGYGADPY-QSGYNQYQSYQPSGATGHQWRGSGSGGSPGWLSQPQGGQNVE 1048
Query: 415 RGYHHPHPSGNQFSA 371
RGY HPH +GNQ+SA
Sbjct: 1049 RGYGHPHQAGNQYSA 1063
>ref|XP_006435155.1| hypothetical protein CICLE_v10000087mg [Citrus clementina]
gi|557537277|gb|ESR48395.1| hypothetical protein
CICLE_v10000087mg [Citrus clementina]
Length = 1123
Score = 86.3 bits (212), Expect = 2e-14
Identities = 89/262 (33%), Positives = 108/262 (41%), Gaps = 37/262 (14%)
Frame = -3
Query: 1060 IVSLEKL---PIDWWLIVCTRKKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSL-HT 893
IV LE L P+ W + ++P ENGR+ G IS RQLGEAAHRLV NSL H
Sbjct: 818 IVQLEDLKPAPVLWH--EDSGRRPHENGRHNP----HGTISGRQLGEAAHRLVANSLQHM 871
Query: 892 KEDRGHGDYRRAYNGQGHGDYIHAQPASYPAA-HGPHVPSFQ-----TQRYNVHENVRPS 731
K DR G+GD +H P Y AA + P VPS+Q Q YN R
Sbjct: 872 KVDR-----------NGYGDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTD 920
Query: 730 ---FGHS-------------------ARDAGHHP--RSH--YEHGSRGGRPVTHSRDYRG 629
GHS A + HHP R H Y+ S G P
Sbjct: 921 SYPAGHSQSSISAAQPPYDGGYSQHYASNTSHHPNRRYHPQYDRNSSGEHPT-------- 972
Query: 628 HGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPTTNFHQQSGYNTSTRYEPYGAGSYNQR 449
H ++ G+ QNGG Y G PP Q GY + Y+ AGS+NQ
Sbjct: 973 HLYNPSGIHQNGGPRYPPRPMGSTSSGANLYPP------QGGY---SGYQSPAAGSFNQW 1023
Query: 448 GGGRASQNQNV-RGYHHPHPSG 386
GG S + +G HH G
Sbjct: 1024 GGANQSMPRGYGQGQHHQRRDG 1045
>ref|XP_006435154.1| hypothetical protein CICLE_v10000087mg [Citrus clementina]
gi|557537276|gb|ESR48394.1| hypothetical protein
CICLE_v10000087mg [Citrus clementina]
Length = 1120
Score = 86.3 bits (212), Expect = 2e-14
Identities = 89/262 (33%), Positives = 108/262 (41%), Gaps = 37/262 (14%)
Frame = -3
Query: 1060 IVSLEKL---PIDWWLIVCTRKKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSL-HT 893
IV LE L P+ W + ++P ENGR+ G IS RQLGEAAHRLV NSL H
Sbjct: 815 IVQLEDLKPAPVLWH--EDSGRRPHENGRHNP----HGTISGRQLGEAAHRLVANSLQHM 868
Query: 892 KEDRGHGDYRRAYNGQGHGDYIHAQPASYPAA-HGPHVPSFQ-----TQRYNVHENVRPS 731
K DR G+GD +H P Y AA + P VPS+Q Q YN R
Sbjct: 869 KVDR-----------NGYGDRMHGSPLPYAAAPYVPPVPSYQEYGVYDQGYNRFSQPRTD 917
Query: 730 ---FGHS-------------------ARDAGHHP--RSH--YEHGSRGGRPVTHSRDYRG 629
GHS A + HHP R H Y+ S G P
Sbjct: 918 SYPAGHSQSSISAAQPPYDGGYSQHYASNTSHHPNRRYHPQYDRNSSGEHPT-------- 969
Query: 628 HGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPTTNFHQQSGYNTSTRYEPYGAGSYNQR 449
H ++ G+ QNGG Y G PP Q GY + Y+ AGS+NQ
Sbjct: 970 HLYNPSGIHQNGGPRYPPRPMGSTSSGANLYPP------QGGY---SGYQSPAAGSFNQW 1020
Query: 448 GGGRASQNQNV-RGYHHPHPSG 386
GG S + +G HH G
Sbjct: 1021 GGANQSMPRGYGQGQHHQRRDG 1042
>gb|EMJ26606.1| hypothetical protein PRUPE_ppa000605mg [Prunus persica]
Length = 1076
Score = 82.0 bits (201), Expect = 4e-13
Identities = 77/238 (32%), Positives = 98/238 (41%), Gaps = 27/238 (11%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXHR---GAISDRQLGEAAHRLVVNSLHTKED-RGHGDYRRAYNGQGH 839
++P+EN R + G+IS R L EAAHRL+VNSL K D G+G+ A
Sbjct: 839 RRPFENARRPFDNARQNPPGSISGRHLEEAAHRLIVNSLQPKVDSNGYGNQMHALRPSYV 898
Query: 838 G------DYIHAQPASYPAAHGP-------HVPSFQTQRYNVHENVR---PSFG--HSAR 713
G + + SY H H P Q + NV+ R P++ HS+
Sbjct: 899 GPPNYPPHHSYTNNGSYAQGHSRMPPPRTIHHPQAQHRASNVNAIPRHGDPAYNDRHSSS 958
Query: 712 DAGHHPRS----HYEHGSRGGRPVTHSRDYRGHGHHTDGMQQNGGHSYSSYASHPQHVGQ 545
A HH S HYE S G G+H G Q+GG Y G
Sbjct: 959 AAHHHQNSSHTQHYERSS-------------GQGYHHSGNHQSGGPIYPQRPIPQAPPGV 1005
Query: 544 IPVPPTTNFHQQSGYNTSTRYEPYGAGSYNQRGG-GRASQNQNVRGYHHPHPSGNQFS 374
PVP Q GYN Y+P G + G + SQN RGY P SGNQ+S
Sbjct: 1006 TPVP------YQGGYNNYQNYQPSGPPAQGFDGWVPQVSQNPG-RGYGRPQQSGNQYS 1056
>ref|XP_002306919.2| EXORIBONUCLEASE 2 family protein [Populus trichocarpa]
gi|550339757|gb|EEE93915.2| EXORIBONUCLEASE 2 family
protein [Populus trichocarpa]
Length = 1052
Score = 80.9 bits (198), Expect = 8e-13
Identities = 68/217 (31%), Positives = 93/217 (42%), Gaps = 5/217 (2%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXHRGAISDRQLGEAAHRLVVNSLHTKEDRGHGDYRRAYNGQGHGDYI 827
++PWEN R G I+ R LGEA+HRLV NSLH K DR G+ +++
Sbjct: 834 RRPWENDRRNPHGNPHGTIAGRHLGEASHRLVANSLHLKGDRN-----------GYSNHM 882
Query: 826 HAQPASYPAA-HGPHVPSFQTQRYNV--HENVRPSFGHSARDAGHHPRSHYEHGSRGGRP 656
H P Y AA GP + S+ +N H +RP R Y H G P
Sbjct: 883 HGPPQPYIAAPRGPPLSSYSNGLHNQGPHGTLRP-------------RGDYSHA---GYP 926
Query: 655 VTHSRDYRGHGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPTTNFHQQSGYNTSTRYEP 476
S R HH G + Y+S +P + G++P Y + R
Sbjct: 927 --RSTSPRIPPHHDRGYVE----PYASAGPNPSYSGRLPQ-----------YESENR--- 966
Query: 475 YGAGSYNQRGGG--RASQNQNVRGYHHPHPSGNQFSA 371
AGS+ Q GG + + N RG+ H SGN+FS+
Sbjct: 967 -SAGSHQQWGGRFPPPANHNNPRGFGHHQQSGNRFSS 1002
>gb|EOY14997.1| 5'-3' exoribonuclease 3 isoform 2 [Theobroma cacao]
Length = 1110
Score = 79.0 bits (193), Expect = 3e-12
Identities = 71/230 (30%), Positives = 99/230 (43%), Gaps = 23/230 (10%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXHR-------GAISDRQLGEAAHRLVVNSLHTKEDRGHGDYRRAYNG 848
++PWENGR+ H GAIS R+LGEA+HRL+ NSL K DR
Sbjct: 833 RRPWENGRSPAQALHLMERHNPPGAISGRKLGEASHRLIANSLQLKGDR----------- 881
Query: 847 QGHGDYIHAQPASYPAAHGPHVPSFQTQ-RYNVHENVR----------PSFGHSARDAGH 701
G + IHA P Y AA P+VP + Y H + PS G+
Sbjct: 882 NGFSNDIHAPPPLYAAA--PYVPPVNSHVNYGFHNQGQHRMVPPGQDYPSAGYPLPQTPL 939
Query: 700 HPRSHYEHGSR----GGRPVTHSRDYRGHGHHTDGMQQNGGHSYSSYASHPQHVGQIPVP 533
P Y HG + H++ + H+ QNGG + P+ + Q+ +
Sbjct: 940 RP--PYAHGYNEPYGPHQYQIHNQAAANNLHYPPRHDQNGGSRHM-----PRSMAQVSME 992
Query: 532 PTTNFHQQSGYNTSTRYEPYGAGSYNQRGGGRASQ-NQNVRGYHHPHPSG 386
+ Q GY+ + Y+ G GS+ Q GG A Q NQ+V G + H G
Sbjct: 993 ASPYPSHQGGYDANRIYQAPGIGSHQQWGGRMAPQANQDVLGGYGLHQQG 1042
>gb|EOY14996.1| 5'-3' exoribonuclease 3 isoform 1 [Theobroma cacao]
Length = 1106
Score = 79.0 bits (193), Expect = 3e-12
Identities = 71/230 (30%), Positives = 99/230 (43%), Gaps = 23/230 (10%)
Frame = -3
Query: 1006 KKPWENGRNXXXXXHR-------GAISDRQLGEAAHRLVVNSLHTKEDRGHGDYRRAYNG 848
++PWENGR+ H GAIS R+LGEA+HRL+ NSL K DR
Sbjct: 829 RRPWENGRSPAQALHLMERHNPPGAISGRKLGEASHRLIANSLQLKGDR----------- 877
Query: 847 QGHGDYIHAQPASYPAAHGPHVPSFQTQ-RYNVHENVR----------PSFGHSARDAGH 701
G + IHA P Y AA P+VP + Y H + PS G+
Sbjct: 878 NGFSNDIHAPPPLYAAA--PYVPPVNSHVNYGFHNQGQHRMVPPGQDYPSAGYPLPQTPL 935
Query: 700 HPRSHYEHGSR----GGRPVTHSRDYRGHGHHTDGMQQNGGHSYSSYASHPQHVGQIPVP 533
P Y HG + H++ + H+ QNGG + P+ + Q+ +
Sbjct: 936 RP--PYAHGYNEPYGPHQYQIHNQAAANNLHYPPRHDQNGGSRHM-----PRSMAQVSME 988
Query: 532 PTTNFHQQSGYNTSTRYEPYGAGSYNQRGGGRASQ-NQNVRGYHHPHPSG 386
+ Q GY+ + Y+ G GS+ Q GG A Q NQ+V G + H G
Sbjct: 989 ASPYPSHQGGYDANRIYQAPGIGSHQQWGGRMAPQANQDVLGGYGLHQQG 1038
>ref|XP_004291380.1| PREDICTED: 5'-3' exoribonuclease 3-like [Fragaria vesca subsp. vesca]
Length = 1052
Score = 75.1 bits (183), Expect = 4e-11
Identities = 64/222 (28%), Positives = 85/222 (38%), Gaps = 11/222 (4%)
Frame = -3
Query: 1006 KKPWE-----NGRNXXXXXHRGAISDRQLGEAAHRLVVNSLHTKEDRGHGDYRRAYNGQG 842
+KPW N + G+IS RQLG+AA RLVVNSLH K + NG G
Sbjct: 837 RKPWHDNSGTNPQESSRQHPPGSISGRQLGDAARRLVVNSLHGKTNS---------NGYG 887
Query: 841 HGDYIHAQPASYPAAHGPHVPSFQTQRYNVHENVRP--SFGHS--ARDAGHHP--RSHYE 680
H P + P + PH + + ++ P +F H +HP R H +
Sbjct: 888 SQMPTHQPPYAEPPYYPPHSYASNGRYDPGPHSIAPPRTFQHPQVQHQNSYHPPSRPHSQ 947
Query: 679 HGSRGGRPVTHSRDYRGHGHHTDGMQQNGGHSYSSYASHPQHVGQIPVPPTTNFHQQSGY 500
H R GH +H QNGG +Y P G +P P + +GY
Sbjct: 948 HYDRNS----------GHAYHQSARHQNGGIAYPHRPVTPAPPGVVPGP-----YPAAGY 992
Query: 499 NTSTRYEPYGAGSYNQRGGGRASQNQNVRGYHHPHPSGNQFS 374
Y+ G Y RGY P S NQ+S
Sbjct: 993 INLRNYQQAGPPGYQGHDAWVPPPQSMGRGYGRPQQSANQYS 1034
>ref|XP_004166598.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 590
Score = 74.3 bits (181), Expect = 8e-11
Identities = 73/232 (31%), Positives = 97/232 (41%), Gaps = 25/232 (10%)
Frame = -3
Query: 994 ENGRNXXXXXHRGAISDRQLGEAAHRLVVNSLHTK--EDRGHGDYRRAYNGQGHGDYIHA 821
ENGR GAIS RQLG+AAHRLVVNSL + + GH +++ YI
Sbjct: 349 ENGRPNPP----GAISGRQLGDAAHRLVVNSLQVRGGDRTGHNNWQAPPLSHTAQPYIPG 404
Query: 820 QPASYPAAHGPHVPSFQTQRYNVHENVRPSFGHSARDAGHH--PRSHYEHGSRGGRPVTH 647
QP S+ +H + Q Y + RP++ GHH R H +HG H
Sbjct: 405 QPPSH--SHRDYRSRDQAVDYRMPPGGRPNYSQ-----GHHNTARGHQDHGYHQPPAGHH 457
Query: 646 SRDYRGHGHHTDGMQQN---------GGHSYSSYASHPQHVGQIPVPP-----TTNFH-- 515
RD R H H + N +Y ++ G VPP T+ H
Sbjct: 458 HRDMRHHSQHYNNRAHNQVSSQHYNENPEAYYPSSASASWQGHSDVPPYHHNGPTSHHPP 517
Query: 514 -QQSGYNTSTRYEPYGAGSYNQR----GGGRASQNQNVRGYHHPHPSGNQFS 374
QSGYN + P G GS Q+ G +A N HH + GN++S
Sbjct: 518 TYQSGYNYNQL--PAGPGSSQQQQHHGGAWQAPPPANHGAPHHQY--GNKYS 565
>ref|XP_004143781.1| PREDICTED: 5'-3' exoribonuclease 3-like [Cucumis sativus]
Length = 1101
Score = 74.3 bits (181), Expect = 8e-11
Identities = 73/232 (31%), Positives = 97/232 (41%), Gaps = 25/232 (10%)
Frame = -3
Query: 994 ENGRNXXXXXHRGAISDRQLGEAAHRLVVNSLHTK--EDRGHGDYRRAYNGQGHGDYIHA 821
ENGR GAIS RQLG+AAHRLVVNSL + + GH +++ YI
Sbjct: 860 ENGRPNPP----GAISGRQLGDAAHRLVVNSLQVRGGDRTGHNNWQAPPLSHTAQPYIPG 915
Query: 820 QPASYPAAHGPHVPSFQTQRYNVHENVRPSFGHSARDAGHH--PRSHYEHGSRGGRPVTH 647
QP S+ +H + Q Y + RP++ GHH R H +HG H
Sbjct: 916 QPPSH--SHRDYRSRDQAVDYRMPPGGRPNYSQ-----GHHNTARGHQDHGYHQPPAGHH 968
Query: 646 SRDYRGHGHHTDGMQQN---------GGHSYSSYASHPQHVGQIPVPP-----TTNFH-- 515
RD R H H + N +Y ++ G VPP T+ H
Sbjct: 969 HRDMRHHSQHYNNRAHNQVSSQHYNENPEAYYPSSASASWQGHSDVPPYHHNGPTSHHPP 1028
Query: 514 -QQSGYNTSTRYEPYGAGSYNQR----GGGRASQNQNVRGYHHPHPSGNQFS 374
QSGYN + P G GS Q+ G +A N HH + GN++S
Sbjct: 1029 TYQSGYNYNQL--PAGPGSSQQQQHHGGAWQAPPPANHGAPHHQY--GNKYS 1076
>ref|XP_004967802.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X3 [Setaria italica]
Length = 866
Score = 70.9 bits (172), Expect = 8e-10
Identities = 69/218 (31%), Positives = 86/218 (39%), Gaps = 35/218 (16%)
Frame = -3
Query: 958 GAISDRQLGEAAHRLVVNSLHTKEDRGHG----DYRRAYNGQGHGDYIH-----AQPASY 806
GAIS RQLGEAAHRLV+NSL+ H Y+ NG H + +H P
Sbjct: 636 GAISGRQLGEAAHRLVINSLNAHGRGQHNGPSMPYQTIMNGMHHLNVVHPIGNQGMPPRV 695
Query: 805 PAAHGPHVPSFQTQRYNVHENVRPSFGHSARDAGHHPRS-HYEHGSRGGRPVTHS----- 644
+ G P + R V + P++ S + RS YE G+R GR H
Sbjct: 696 EQSAGR--PGWNVPRDGVPDGQIPAYASSGSGHYQYDRSGQYEQGNR-GRQQNHPYARDG 752
Query: 643 -RDYRGHGHHTDGMQQNGGHSYSS-----------YASHPQHV------GQIPVPPTTNF 518
D RG G QQ GG+ YSS Y P G PP
Sbjct: 753 YHDARGRVPPAYGYQQTGGNMYSSQPVALPPGPGLYGQQPPSAYPGVRGGGYQPPPYGGA 812
Query: 517 H--QQSGYNTSTRYEPYGAGSYNQRGGGRASQNQNVRG 410
QQ Y++ PYG G R R+ Q+QN G
Sbjct: 813 QQWQQQPYSSYAGRGPYGGGPPPTRADSRSQQSQNRYG 850
>ref|XP_004967801.1| PREDICTED: 5'-3' exoribonuclease 3-like isoform X2 [Setaria italica]
Length = 994
Score = 70.9 bits (172), Expect = 8e-10
Identities = 69/218 (31%), Positives = 86/218 (39%), Gaps = 35/218 (16%)
Frame = -3
Query: 958 GAISDRQLGEAAHRLVVNSLHTKEDRGHG----DYRRAYNGQGHGDYIH-----AQPASY 806
GAIS RQLGEAAHRLV+NSL+ H Y+ NG H + +H P
Sbjct: 764 GAISGRQLGEAAHRLVINSLNAHGRGQHNGPSMPYQTIMNGMHHLNVVHPIGNQGMPPRV 823
Query: 805 PAAHGPHVPSFQTQRYNVHENVRPSFGHSARDAGHHPRS-HYEHGSRGGRPVTHS----- 644
+ G P + R V + P++ S + RS YE G+R GR H
Sbjct: 824 EQSAGR--PGWNVPRDGVPDGQIPAYASSGSGHYQYDRSGQYEQGNR-GRQQNHPYARDG 880
Query: 643 -RDYRGHGHHTDGMQQNGGHSYSS-----------YASHPQHV------GQIPVPPTTNF 518
D RG G QQ GG+ YSS Y P G PP
Sbjct: 881 YHDARGRVPPAYGYQQTGGNMYSSQPVALPPGPGLYGQQPPSAYPGVRGGGYQPPPYGGA 940
Query: 517 H--QQSGYNTSTRYEPYGAGSYNQRGGGRASQNQNVRG 410
QQ Y++ PYG G R R+ Q+QN G
Sbjct: 941 QQWQQQPYSSYAGRGPYGGGPPPTRADSRSQQSQNRYG 978