BLASTX nr result
ID: Atropa21_contig00029180
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00029180
(1117 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350862.1| PREDICTED: transcription initiation factor T... 115 4e-23
ref|XP_006350861.1| PREDICTED: transcription initiation factor T... 115 4e-23
gb|EPS58304.1| hypothetical protein M569_16511 [Genlisea aurea] 100 1e-18
emb|CBI28434.3| unnamed protein product [Vitis vinifera] 100 1e-18
ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261... 100 1e-18
ref|XP_002521188.1| RNA binding protein, putative [Ricinus commu... 97 9e-18
ref|XP_006602073.1| PREDICTED: transcription initiation factor T... 97 2e-17
gb|ESW18818.1| hypothetical protein PHAVU_006G072900g [Phaseolus... 97 2e-17
ref|XP_004145234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri... 97 2e-17
ref|XP_006369676.1| hypothetical protein POPTR_0001s288101g, par... 95 4e-17
ref|XP_002298497.1| predicted protein [Populus trichocarpa] 95 4e-17
ref|NP_851215.1| TBP-associated factor 15B [Arabidopsis thaliana... 94 1e-16
ref|XP_006379127.1| hypothetical protein POPTR_0009s08040g [Popu... 93 2e-16
ref|XP_002313969.1| predicted protein [Populus trichocarpa] 93 2e-16
ref|XP_006401076.1| hypothetical protein EUTSA_v10012621mg [Eutr... 91 1e-15
ref|XP_006281876.1| hypothetical protein CARUB_v10028073mg, part... 91 1e-15
gb|EXC45494.1| RNA-binding protein EWS [Morus notabilis] 90 2e-15
ref|XP_002866269.1| hypothetical protein ARALYDRAFT_495966 [Arab... 89 3e-15
ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medica... 88 5e-15
ref|XP_006575424.1| PREDICTED: transcription initiation factor T... 88 7e-15
>ref|XP_006350862.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
isoform X2 [Solanum tuberosum]
gi|565368460|ref|XP_006350863.1| PREDICTED: transcription
initiation factor TFIID subunit 15b-like isoform X3
[Solanum tuberosum]
Length = 450
Score = 115 bits (287), Expect = 4e-23
Identities = 61/92 (66%), Positives = 62/92 (67%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKI+VAMAEKSAPKP PAF
Sbjct: 363 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKITVAMAEKSAPKPPPAF----GSGRGGR 418
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDRQ HGGNRSRPY
Sbjct: 419 GGYGGGRRDNYRDGGGSGPDRQSHGGNRSRPY 450
>ref|XP_006350861.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
isoform X1 [Solanum tuberosum]
Length = 461
Score = 115 bits (287), Expect = 4e-23
Identities = 61/92 (66%), Positives = 62/92 (67%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKI+VAMAEKSAPKP PAF
Sbjct: 374 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKITVAMAEKSAPKPPPAF----GSGRGGR 429
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDRQ HGGNRSRPY
Sbjct: 430 GGYGGGRRDNYRDGGGSGPDRQSHGGNRSRPY 461
>gb|EPS58304.1| hypothetical protein M569_16511 [Genlisea aurea]
Length = 371
Score = 100 bits (248), Expect = 1e-18
Identities = 53/93 (56%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Frame = -3
Query: 1112 NKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAF--XXXXXXXXXX 939
NKGDAVLSYEDPSAAHSAGGFFN H+ RG+KI V+MAEKSAPK AP++
Sbjct: 279 NKGDAVLSYEDPSAAHSAGGFFNGHEMRGHKIKVSMAEKSAPKAAPSYGSGGGGGGRGNY 338
Query: 938 XXXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR FHGGNRSRPY
Sbjct: 339 GGGDRRRDNYRGGGGGSSGPDRNFHGGNRSRPY 371
>emb|CBI28434.3| unnamed protein product [Vitis vinifera]
Length = 873
Score = 100 bits (248), Expect = 1e-18
Identities = 53/92 (57%), Positives = 58/92 (63%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDA LSYEDPSAAHSAGGF+NN++ RGYKI+VAMAEKSAP+ PAF
Sbjct: 784 NNKGDACLSYEDPSAAHSAGGFYNNYEMRGYKINVAMAEKSAPRAPPAF--GHGGGGRGG 841
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR HGGNRSRPY
Sbjct: 842 YGGGDRRRDNYRDNAGSGPDRHHHGGNRSRPY 873
>ref|XP_002269146.1| PREDICTED: uncharacterized protein LOC100261263 [Vitis vinifera]
Length = 462
Score = 100 bits (248), Expect = 1e-18
Identities = 53/92 (57%), Positives = 58/92 (63%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDA LSYEDPSAAHSAGGF+NN++ RGYKI+VAMAEKSAP+ PAF
Sbjct: 373 NNKGDACLSYEDPSAAHSAGGFYNNYEMRGYKINVAMAEKSAPRAPPAF--GHGGGGRGG 430
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR HGGNRSRPY
Sbjct: 431 YGGGDRRRDNYRDNAGSGPDRHHHGGNRSRPY 462
>ref|XP_002521188.1| RNA binding protein, putative [Ricinus communis]
gi|223539602|gb|EEF41188.1| RNA binding protein, putative
[Ricinus communis]
Length = 437
Score = 97.4 bits (241), Expect = 9e-18
Identities = 52/92 (56%), Positives = 60/92 (65%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDAVLSYEDPSAAHSAGGF+NN+D RGYKI+VAMAEK+AP+ P++
Sbjct: 351 NNKGDAVLSYEDPSAAHSAGGFYNNYDMRGYKINVAMAEKTAPR-QPSY----DHGGGRG 405
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR +HGGNRSRPY
Sbjct: 406 GYGGGDRRRENNRDGGSGPDRHYHGGNRSRPY 437
>ref|XP_006602073.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
isoform X1 [Glycine max]
Length = 508
Score = 96.7 bits (239), Expect = 2e-17
Identities = 52/92 (56%), Positives = 58/92 (63%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDA L+YEDPSAAHSAGGF+NN+D RGYKISVAMAEKSAP+ PA+
Sbjct: 420 NNKGDACLAYEDPSAAHSAGGFYNNYDLRGYKISVAMAEKSAPRAPPAY---NQGGNRGG 476
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR+ H GNRSRPY
Sbjct: 477 YGGDRRRDNYRDGGGGSGPDRRDHYGNRSRPY 508
>gb|ESW18818.1| hypothetical protein PHAVU_006G072900g [Phaseolus vulgaris]
Length = 517
Score = 96.7 bits (239), Expect = 2e-17
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDA L+YEDPSAAHSAGGF+NN+D RGYKISVAMAEKSAP+ PA+
Sbjct: 430 NNKGDACLAYEDPSAAHSAGGFYNNYDLRGYKISVAMAEKSAPRAPPAYNQGGNRGGYGG 489
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
PDR+ H GNRSRPY
Sbjct: 490 DRRRENYRDGGGSG----PDRRDHYGNRSRPY 517
>ref|XP_004145234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101203985
[Cucumis sativus]
Length = 465
Score = 96.7 bits (239), Expect = 2e-17
Identities = 51/92 (55%), Positives = 57/92 (61%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDA +SYEDPSAAHSAGGF+NN+D RGY I+VAMAEKSAP+ PA+
Sbjct: 376 NNKGDACVSYEDPSAAHSAGGFYNNYDLRGYSINVAMAEKSAPRAPPAY--NHGGGGRGG 433
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR HGGNRSRPY
Sbjct: 434 YGGGGDRRRDSYRDGGSGPDRHQHGGNRSRPY 465
>ref|XP_006369676.1| hypothetical protein POPTR_0001s288101g, partial [Populus
trichocarpa] gi|550348413|gb|ERP66245.1| hypothetical
protein POPTR_0001s288101g, partial [Populus trichocarpa]
Length = 275
Score = 95.1 bits (235), Expect = 4e-17
Identities = 52/92 (56%), Positives = 57/92 (61%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDA L+YEDPSAAHSAGGF+NN+DFRGYKI+VAMAEKSAP+ PA
Sbjct: 188 NNKGDACLAYEDPSAAHSAGGFYNNYDFRGYKINVAMAEKSAPRQ-PAHDHGGGRGGYGG 246
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
PDR HGGNRSRPY
Sbjct: 247 GGRRRDNYRDGGNSG---PDRHQHGGNRSRPY 275
>ref|XP_002298497.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 95.1 bits (235), Expect = 4e-17
Identities = 52/92 (56%), Positives = 57/92 (61%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDA L+YEDPSAAHSAGGF+NN+DFRGYKI+VAMAEKSAP+ PA
Sbjct: 312 NNKGDACLAYEDPSAAHSAGGFYNNYDFRGYKINVAMAEKSAPRQ-PAHDHGGGRGGYGG 370
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
PDR HGGNRSRPY
Sbjct: 371 GGRRRDNYRDGGNSG---PDRHQHGGNRSRPY 399
>ref|NP_851215.1| TBP-associated factor 15B [Arabidopsis thaliana]
gi|30697077|ref|NP_568879.3| TBP-associated factor 15B
[Arabidopsis thaliana]
gi|75332298|sp|Q94KD0.1|TA15B_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 15b;
AltName: Full=TBP-associated factor 15b; Short=AtTAF15b
gi|14194175|gb|AAK56282.1|AF367294_1 AT5g58470/mqj2_60
[Arabidopsis thaliana] gi|18700145|gb|AAL77684.1|
AT5g58470/mqj2_60 [Arabidopsis thaliana]
gi|222423096|dbj|BAH19528.1| AT5G58470 [Arabidopsis
thaliana] gi|332009673|gb|AED97056.1| TBP-associated
factor 15B [Arabidopsis thaliana]
gi|332009674|gb|AED97057.1| TBP-associated factor 15B
[Arabidopsis thaliana]
Length = 422
Score = 93.6 bits (231), Expect = 1e-16
Identities = 51/92 (55%), Positives = 55/92 (59%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
N KGDA L+YEDPSAAHSAGGFFNN++ RG KISV MAEKSAP+ AP F
Sbjct: 332 NYKGDACLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAEKSAPR-APTFDQRGGGRGGGG 390
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR HGGNRSRPY
Sbjct: 391 GGYGGGGGDRRRDNYSSGPDRNHHGGNRSRPY 422
>ref|XP_006379127.1| hypothetical protein POPTR_0009s08040g [Populus trichocarpa]
gi|550331275|gb|ERP56924.1| hypothetical protein
POPTR_0009s08040g [Populus trichocarpa]
Length = 443
Score = 92.8 bits (229), Expect = 2e-16
Identities = 52/92 (56%), Positives = 57/92 (61%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDA L+YEDPSAAHSAGGF+NN+D RGYKI+VAMAEKSAP+ PA
Sbjct: 358 NNKGDACLAYEDPSAAHSAGGFYNNYDMRGYKINVAMAEKSAPR-QPA-----HDHGGGR 411
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR HGGNRSRPY
Sbjct: 412 GGYGGGDRRNYRDAGNSGPDRHQHGGNRSRPY 443
>ref|XP_002313969.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 92.8 bits (229), Expect = 2e-16
Identities = 52/92 (56%), Positives = 57/92 (61%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGDA L+YEDPSAAHSAGGF+NN+D RGYKI+VAMAEKSAP+ PA
Sbjct: 137 NNKGDACLAYEDPSAAHSAGGFYNNYDMRGYKINVAMAEKSAPR-QPA-----HDHGGGR 190
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR HGGNRSRPY
Sbjct: 191 GGYGGGDRRNYRDAGNSGPDRHQHGGNRSRPY 222
>ref|XP_006401076.1| hypothetical protein EUTSA_v10012621mg [Eutrema salsugineum]
gi|557102166|gb|ESQ42529.1| hypothetical protein
EUTSA_v10012621mg [Eutrema salsugineum]
Length = 904
Score = 90.5 bits (223), Expect = 1e-15
Identities = 50/93 (53%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = -3
Query: 1112 NKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXXX 933
NKGDA L+YEDPSAAHSAGGFFNN++ RG+KI V+MA KSAP+ APAF
Sbjct: 813 NKGDACLTYEDPSAAHSAGGFFNNYEMRGHKIGVSMAAKSAPR-APAFDQRGGGGRGGGG 871
Query: 932 XXXXXXXXXXXXXXXXG--PDRQFHGGNRSRPY 840
G PDR +HGGNRSRPY
Sbjct: 872 GGGGGYGGGDRRRDNYGSGPDRNYHGGNRSRPY 904
>ref|XP_006281876.1| hypothetical protein CARUB_v10028073mg, partial [Capsella rubella]
gi|482550580|gb|EOA14774.1| hypothetical protein
CARUB_v10028073mg, partial [Capsella rubella]
Length = 918
Score = 90.5 bits (223), Expect = 1e-15
Identities = 51/92 (55%), Positives = 56/92 (60%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
N+KGDA L+YEDPSAAHSAGGFFNN++ RG KISV MAEKSAP+ AP F
Sbjct: 829 NHKGDACLAYEDPSAAHSAGGFFNNYEMRGSKISVTMAEKSAPR-APTF-DQRGGGRGGG 886
Query: 935 XXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR HGGNRSRPY
Sbjct: 887 GGYGGGGGDRRRDNYGSGPDRNHHGGNRSRPY 918
>gb|EXC45494.1| RNA-binding protein EWS [Morus notabilis]
Length = 588
Score = 89.7 bits (221), Expect = 2e-15
Identities = 41/49 (83%), Positives = 46/49 (93%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAF 969
NNKGDAVLSYEDPSAAHSAGGF+N++D RGYKI+VAMAEKSAPK PA+
Sbjct: 374 NNKGDAVLSYEDPSAAHSAGGFYNDYDLRGYKINVAMAEKSAPKAPPAY 422
>ref|XP_002866269.1| hypothetical protein ARALYDRAFT_495966 [Arabidopsis lyrata subsp.
lyrata] gi|297312104|gb|EFH42528.1| hypothetical protein
ARALYDRAFT_495966 [Arabidopsis lyrata subsp. lyrata]
Length = 428
Score = 89.0 bits (219), Expect = 3e-15
Identities = 51/95 (53%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAF---XXXXXXXX 945
NNKGDA L+YEDPSAAHSAGGFFNN++ RG KISV MA KSAP+ AP F
Sbjct: 335 NNKGDACLAYEDPSAAHSAGGFFNNYEMRGNKISVTMAAKSAPR-APTFDQRGGGRGGGG 393
Query: 944 XXXXXXXXXXXXXXXXXXXXGPDRQFHGGNRSRPY 840
GPDR HGGNRSRPY
Sbjct: 394 GGGGGYGGGGGDRRRDNYGSGPDRNHHGGNRSRPY 428
>ref|XP_003599332.1| HIV Tat-specific factor-like protein [Medicago truncatula]
gi|355488380|gb|AES69583.1| HIV Tat-specific factor-like
protein [Medicago truncatula]
Length = 473
Score = 88.2 bits (217), Expect = 5e-15
Identities = 50/92 (54%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = -3
Query: 1112 NKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXXX 933
NKGDA L+YEDPSAAHSAGGF+N++D RGYKI VAMAEKSAP+ PA
Sbjct: 392 NKGDACLAYEDPSAAHSAGGFYNDYDLRGYKIGVAMAEKSAPRAPPA----------NNH 441
Query: 932 XXXXXXXXXXXXXXXXGPDRQFH-GGNRSRPY 840
GPDR+ H GGNRSRPY
Sbjct: 442 GGNRGGYGGDRRRDNSGPDRRDHYGGNRSRPY 473
>ref|XP_006575424.1| PREDICTED: transcription initiation factor TFIID subunit 15b-like
isoform X2 [Glycine max]
Length = 390
Score = 87.8 bits (216), Expect = 7e-15
Identities = 50/93 (53%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Frame = -3
Query: 1115 NNKGDAVLSYEDPSAAHSAGGFFNNHDFRGYKISVAMAEKSAPKPAPAFXXXXXXXXXXX 936
NNKGD L YEDPSAAHSAG F+NN+D RGYKI VAMAEKSAPK PA+
Sbjct: 302 NNKGDGCLVYEDPSAAHSAGSFYNNYDLRGYKIGVAMAEKSAPKAPPAY----NHGGNRS 357
Query: 935 XXXXXXXXXXXXXXXXXGPDRQ-FHGGNRSRPY 840
GPDR+ +GGNRSRPY
Sbjct: 358 GYGGDRRRDNYRDGGSSGPDRRDNYGGNRSRPY 390