BLASTX nr result
ID: Atropa21_contig00029164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00029164
(928 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004250855.1| PREDICTED: ribosomal protein S12, mitochondr... 136 1e-29
ref|YP_173380.1| ribosomal protein S12 [Nicotiana tabacum] 135 2e-29
gb|AAD03039.1| ribosomal protein S12 [Solanum tuberosum] 135 2e-29
sp|Q95869.1|RT12_NICSY RecName: Full=Ribosomal protein S12, mito... 133 1e-28
ref|YP_006666121.1| ribosomal protein S12 (mitochondrion) [Malus... 133 1e-28
dbj|BAO50919.1| ribosomal protein S12 (mitochondrion) [Hevea bra... 132 2e-28
sp|P68535.1|RT12_PETHY RecName: Full=Ribosomal protein S12, mito... 132 2e-28
gb|AEN56124.1| ribosomal protein S12 [Cucumis melo subsp. melo] 132 2e-28
ref|YP_004849331.1| ribosomal protein S12 [Cucumis sativus] gi|3... 132 2e-28
ref|YP_002608383.1| ribosomal protein S12 [Vitis vinifera] gi|20... 130 5e-28
ref|YP_006291814.1| rps12 gene product (mitochondrion) [Daucus c... 130 9e-28
ref|YP_002608203.1| ribosomal protein S12 [Carica papaya] gi|170... 130 9e-28
ref|YP_003587377.1| ribosomal protein S12 [Cucurbita pepo] gi|25... 129 2e-27
ref|YP_003587241.1| ribosomal protein S12 [Citrullus lanatus] gi... 129 2e-27
gb|AAK92224.2| ribosomal protein S12 [Pisum sativum] 129 2e-27
ref|YP_004237277.1| ribosomal protein S12 (mitochondrion) [Ricin... 128 3e-27
gb|AHA47102.1| ribosomal protein S12 (mitochondrion) [Amborella ... 128 3e-27
sp|P27070.1|RT12_PANGI RecName: Full=Ribosomal protein S12, mito... 128 3e-27
ref|YP_006280933.1| ribosomal protein S12 (mitochondrion) [Spiro... 128 3e-27
ref|YP_004222825.1| ribosomal protein S12 [Vigna radiata] gi|530... 127 5e-27
>ref|XP_004250855.1| PREDICTED: ribosomal protein S12, mitochondrial-like [Solanum
lycopersicum]
Length = 146
Score = 136 bits (342), Expect = 1e-29
Identities = 65/80 (81%), Positives = 73/80 (91%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKDSPGVKFHCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPDEGHNLQEHSMVLIRGGRVKDSPGVKFHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*KL 284
L IPD+RRGRSKY ++ K+
Sbjct: 105 LGIPDRRRGRSKYGAEKHKI 124
>ref|YP_173380.1| ribosomal protein S12 [Nicotiana tabacum]
Length = 125
Score = 135 bits (340), Expect = 2e-29
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKDSPGVKFHCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGVKFHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>gb|AAD03039.1| ribosomal protein S12 [Solanum tuberosum]
Length = 123
Score = 135 bits (340), Expect = 2e-29
Identities = 65/79 (82%), Positives = 72/79 (91%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKDSPGVKFHCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGVKFHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>sp|Q95869.1|RT12_NICSY RecName: Full=Ribosomal protein S12, mitochondrial
gi|1563736|emb|CAA65515.1| ribosomal protein S12
[Nicotiana sylvestris]
Length = 125
Score = 133 bits (334), Expect = 1e-28
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHN QE+SMVLIRGGRVKDSPGVKFHCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSMVLIRGGRVKDSPGVKFHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>ref|YP_006666121.1| ribosomal protein S12 (mitochondrion) [Malus domestica]
gi|404481701|ref|YP_006666133.1| ribosomal protein S12
(mitochondrion) [Malus domestica]
gi|384080912|dbj|BAM11118.1| ribosomal protein S12
(mitochondrion) [Malus domestica]
gi|384080914|dbj|BAM11119.1| ribosomal protein S12
(mitochondrion) [Malus domestica]
gi|401661925|emb|CBX33380.1| rps12 (mitochondrion)
[Malus domestica] gi|401661936|emb|CBX33395.1| rps12
(mitochondrion) [Malus domestica]
Length = 125
Score = 133 bits (334), Expect = 1e-28
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKD PGVKFHCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>dbj|BAO50919.1| ribosomal protein S12 (mitochondrion) [Hevea brasiliensis]
Length = 125
Score = 132 bits (332), Expect = 2e-28
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKDSPGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>sp|P68535.1|RT12_PETHY RecName: Full=Ribosomal protein S12, mitochondrial
gi|55977315|sp|P68536.1|RT12_PETPA RecName:
Full=Ribosomal protein S12, mitochondrial
gi|7440357|pir||JC6098 ribosomal protein S12 - petunia
mitochondrion gi|1046293|gb|AAA80309.1| ribosomal
protein S12 [Petunia axillaris subsp. parodii]
gi|1046303|gb|AAB82732.1| ribosomal protein S12 [Petunia
x hybrida] gi|1256948|gb|AAA96604.1| ribosomal protein
S12 [Petunia axillaris subsp. parodii]
gi|1589661|prf||2211395A ribosomal protein S12
Length = 125
Score = 132 bits (332), Expect = 2e-28
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKDSPGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>gb|AEN56124.1| ribosomal protein S12 [Cucumis melo subsp. melo]
Length = 125
Score = 132 bits (332), Expect = 2e-28
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKDSPGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>ref|YP_004849331.1| ribosomal protein S12 [Cucumis sativus] gi|325305589|gb|ADZ10758.1|
ribosomal protein S12 [Cucumis sativus]
Length = 125
Score = 132 bits (332), Expect = 2e-28
Identities = 64/79 (81%), Positives = 71/79 (89%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKDSPGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>ref|YP_002608383.1| ribosomal protein S12 [Vitis vinifera] gi|209954180|emb|CAQ77632.1|
ribosomal protein S12 [Vitis vinifera]
gi|239764733|gb|ACS15204.1| ribosomal protein S12 [Vitis
vinifera]
Length = 125
Score = 130 bits (328), Expect = 5e-28
Identities = 63/79 (79%), Positives = 70/79 (88%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHN QE+SMVLIRGGRVKD PGVKFHCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSMVLIRGGRVKDLPGVKFHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>ref|YP_006291814.1| rps12 gene product (mitochondrion) [Daucus carota subsp. sativus]
gi|386799257|ref|YP_006291849.1| rps12 gene product
(mitochondrion) [Daucus carota subsp. sativus]
gi|386799263|ref|YP_006291863.1| rps12 gene product
(mitochondrion) [Daucus carota subsp. sativus]
gi|374081941|gb|AEY81133.1| ribosomal protein S12
(mitochondrion) [Daucus carota subsp. sativus]
gi|374081960|gb|AEY81152.1| ribosomal protein S12
(mitochondrion) [Daucus carota subsp. sativus]
gi|374081966|gb|AEY81158.1| ribosomal protein S12
(mitochondrion) [Daucus carota subsp. sativus]
Length = 125
Score = 130 bits (326), Expect = 9e-28
Identities = 63/79 (79%), Positives = 70/79 (88%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKDSPGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+R GRSKY ++ K
Sbjct: 105 LGIPDRRSGRSKYGAEKPK 123
>ref|YP_002608203.1| ribosomal protein S12 [Carica papaya] gi|170522382|gb|ACB20492.1|
ribosomal protein S12 (mitochondrion) [Carica papaya]
Length = 125
Score = 130 bits (326), Expect = 9e-28
Identities = 63/79 (79%), Positives = 70/79 (88%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHN QE+SMVLIRGGRVKDSPGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSMVLIRGGRVKDSPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>ref|YP_003587377.1| ribosomal protein S12 [Cucurbita pepo] gi|259156830|gb|ACV96691.1|
ribosomal protein S12 [Cucurbita pepo]
Length = 125
Score = 129 bits (324), Expect = 2e-27
Identities = 63/79 (79%), Positives = 70/79 (88%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SA RKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKD PGVKFHCIRGVKDL
Sbjct: 45 PNSALRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>ref|YP_003587241.1| ribosomal protein S12 [Citrullus lanatus]
gi|259156786|gb|ACV96648.1| ribosomal protein S12
[Citrullus lanatus]
Length = 123
Score = 129 bits (324), Expect = 2e-27
Identities = 63/79 (79%), Positives = 70/79 (88%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SA RKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKD PGVKFHCIRGVKDL
Sbjct: 45 PNSALRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>gb|AAK92224.2| ribosomal protein S12 [Pisum sativum]
Length = 125
Score = 129 bits (323), Expect = 2e-27
Identities = 63/79 (79%), Positives = 69/79 (87%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHN QE+SMVLIRGGRVKD PGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSMVLIRGGRVKDLPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY +R K
Sbjct: 105 LGIPDRRRGRSKYGAERPK 123
>ref|YP_004237277.1| ribosomal protein S12 (mitochondrion) [Ricinus communis]
gi|322394284|gb|ADW96041.1| ribosomal protein S12
(mitochondrion) [Ricinus communis]
Length = 125
Score = 128 bits (322), Expect = 3e-27
Identities = 63/79 (79%), Positives = 70/79 (88%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SA RKIAKVRLSNRH+IF H+ EGHNLQE+SMVLIRGGRVKDSPGVK HCIRGVKDL
Sbjct: 45 PNSALRKIAKVRLSNRHDIFAHIPGEGHNLQEHSMVLIRGGRVKDSPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>gb|AHA47102.1| ribosomal protein S12 (mitochondrion) [Amborella trichopoda]
gi|567767319|gb|AHC94307.1| ribosomal protein S12
(mitochondrion) [Amborella trichopoda]
Length = 125
Score = 128 bits (321), Expect = 3e-27
Identities = 63/79 (79%), Positives = 70/79 (88%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SA RKIAKVRLSNRH+IF ++ EGHNLQE+SMVLIRGGRVKD PGVKFHCIRGVKDL
Sbjct: 45 PNSALRKIAKVRLSNRHDIFAYIPGEGHNLQEHSMVLIRGGRVKDLPGVKFHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY +R K
Sbjct: 105 LGIPDRRRGRSKYGAERPK 123
>sp|P27070.1|RT12_PANGI RecName: Full=Ribosomal protein S12, mitochondrial
gi|1352870|gb|AAB01589.1| ribosomal protein S12 [Panax
ginseng]
Length = 125
Score = 128 bits (321), Expect = 3e-27
Identities = 62/79 (78%), Positives = 70/79 (88%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRL+NRH+IF H+ EGHN QE+SMVLIRGGRVKDSPGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLANRHDIFPHIPGEGHNSQEHSMVLIRGGRVKDSPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123
>ref|YP_006280933.1| ribosomal protein S12 (mitochondrion) [Spirodela polyrhiza]
gi|385252634|gb|AFI54942.1| ribosomal protein S12
(mitochondrion) [Spirodela polyrhiza]
Length = 125
Score = 128 bits (321), Expect = 3e-27
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHN QE+ +VLIRGGRVKDSPGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHPLVLIRGGRVKDSPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY +R K
Sbjct: 105 LGIPDRRRGRSKYGAERPK 123
>ref|YP_004222825.1| ribosomal protein S12 [Vigna radiata]
gi|5305368|gb|AAD41618.1|AF071550_3 rps12 [Vigna
radiata] gi|308206761|gb|ADO19898.1| ribosomal protein
S12 [Vigna radiata]
Length = 125
Score = 127 bits (320), Expect = 5e-27
Identities = 62/79 (78%), Positives = 69/79 (87%)
Frame = -1
Query: 523 PDSAPRKIAKVRLSNRHNIFVHVSCEGHNLQEYSMVLIRGGRVKDSPGVKFHCIRGVKDL 344
P+SAPRKIAKVRLSNRH+IF H+ EGHN QE+SMVLIRGGRVKD PGVK HCIRGVKDL
Sbjct: 45 PNSAPRKIAKVRLSNRHDIFAHIPGEGHNSQEHSMVLIRGGRVKDLPGVKSHCIRGVKDL 104
Query: 343 LKIPDQRRGRSKYDWQR*K 287
L IPD+RRGRSKY ++ K
Sbjct: 105 LGIPDRRRGRSKYGAEKPK 123