BLASTX nr result

ID: Atropa21_contig00029094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00029094
         (462 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006347831.1| PREDICTED: pentatricopeptide repeat-containi...   194   8e-48
ref|XP_004231252.1| PREDICTED: pentatricopeptide repeat-containi...   179   4e-43
gb|EPS58257.1| hypothetical protein M569_16559 [Genlisea aurea]        60   4e-07
ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containi...    60   4e-07
ref|XP_002528626.1| pentatricopeptide repeat-containing protein,...    58   1e-06
emb|CBI30210.3| unnamed protein product [Vitis vinifera]               57   3e-06
gb|EXB75955.1| hypothetical protein L484_022634 [Morus notabilis]      56   6e-06
ref|XP_006481930.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06
ref|XP_006430347.1| hypothetical protein CICLE_v10011036mg [Citr...    55   7e-06
ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containi...    55   7e-06

>ref|XP_006347831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Solanum tuberosum]
          Length = 894

 Score =  194 bits (494), Expect = 8e-48
 Identities = 105/142 (73%), Positives = 115/142 (80%)
 Frame = -1

Query: 426 MAAXXXXXXXXXXXSLLSIQPFNIHSLFIPTSSLVTTKKTKYKHRPSLFLQNPSKKTSFI 247
           MAA           SLL  +PFN+HSLF  TSSL TTKKTK KH+PSLFLQNPSK    +
Sbjct: 1   MAAVFYSPNNAIPLSLLPPRPFNLHSLFTCTSSLTTTKKTKCKHKPSLFLQNPSKY-HLV 59

Query: 246 QPLLTPQQFKDSNVSVGSDTNRIDYSNLLRISVRCGDVVLTKIIRSSILKLEEEDVYLKN 67
           QPLLTPQQFKDSNVSV SDTN IDY+NLLRISVRCGDVVLTKII SS++K EEEDVYLKN
Sbjct: 60  QPLLTPQQFKDSNVSVDSDTNCIDYANLLRISVRCGDVVLTKIIHSSLVKFEEEDVYLKN 119

Query: 66  ALVAAYIKLGYLSLVEKVFDSL 1
           AL+AAYIKLG L+L E+VFDSL
Sbjct: 120 ALIAAYIKLGCLNLAERVFDSL 141


>ref|XP_004231252.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Solanum lycopersicum]
          Length = 891

 Score =  179 bits (453), Expect = 4e-43
 Identities = 99/142 (69%), Positives = 111/142 (78%)
 Frame = -1

Query: 426 MAAXXXXXXXXXXXSLLSIQPFNIHSLFIPTSSLVTTKKTKYKHRPSLFLQNPSKKTSFI 247
           MAA           SLL  +PFN+HSLF  TSSL TTKKTK KH+PSLFLQNPSK +  +
Sbjct: 1   MAAVFYSPNNAIPLSLLPPRPFNLHSLFTCTSSLTTTKKTKCKHKPSLFLQNPSK-SHLV 59

Query: 246 QPLLTPQQFKDSNVSVGSDTNRIDYSNLLRISVRCGDVVLTKIIRSSILKLEEEDVYLKN 67
           QP   PQQFKDSN SV S+TN IDY+NLLRISVRCGDV LTKII SS++K EEEDVYLKN
Sbjct: 60  QP---PQQFKDSNGSVDSETNCIDYANLLRISVRCGDVELTKIIHSSLVKFEEEDVYLKN 116

Query: 66  ALVAAYIKLGYLSLVEKVFDSL 1
           AL+AAYIKLG L+L E+VFDSL
Sbjct: 117 ALIAAYIKLGCLNLAERVFDSL 138


>gb|EPS58257.1| hypothetical protein M569_16559 [Genlisea aurea]
          Length = 846

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/59 (47%), Positives = 43/59 (72%)
 Frame = -1

Query: 177 DYSNLLRISVRCGDVVLTKIIRSSILKLEEEDVYLKNALVAAYIKLGYLSLVEKVFDSL 1
           D S LL++S+  GDV   K + +SIL+ EE+D+ L+N+LV AY++LG ++  E VFDS+
Sbjct: 39  DLSRLLKLSIEYGDVNFCKAVHASILRGEEDDIRLQNSLVTAYLRLGRVNDAESVFDSI 97


>ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/97 (36%), Positives = 53/97 (54%)
 Frame = -1

Query: 291 PSLFLQNPSKKTSFIQPLLTPQQFKDSNVSVGSDTNRIDYSNLLRISVRCGDVVLTKIIR 112
           P+ F  +P    S  +PL   +    S  ++ S  +      LLR+S R GD  L + + 
Sbjct: 67  PTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFD------LLRLSTRYGDPDLARAVH 120

Query: 111 SSILKLEEEDVYLKNALVAAYIKLGYLSLVEKVFDSL 1
           +  LKLEE D++L NAL++AY+KLG +   +KVF  L
Sbjct: 121 AQFLKLEE-DIFLGNALISAYLKLGLVRDADKVFSGL 156


>ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/97 (36%), Positives = 53/97 (54%)
 Frame = -1

Query: 291 PSLFLQNPSKKTSFIQPLLTPQQFKDSNVSVGSDTNRIDYSNLLRISVRCGDVVLTKIIR 112
           P+ F  +P    S  +PL   +    S  ++ S  +      LLR+S R GD  L + + 
Sbjct: 67  PTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFD------LLRLSTRYGDPDLARAVH 120

Query: 111 SSILKLEEEDVYLKNALVAAYIKLGYLSLVEKVFDSL 1
           +  LKLEE D++L NAL++AY+KLG +   +KVF  L
Sbjct: 121 AQFLKLEE-DIFLGNALISAYLKLGLVRDADKVFSGL 156


>ref|XP_002528626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531915|gb|EEF33729.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 537

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 45/125 (36%), Positives = 64/125 (51%), Gaps = 9/125 (7%)
 Frame = -1

Query: 348 LFIPTSSLVTTKKTKYKHRP--------SLFLQNPSKKTSF-IQPLLTPQQFKDSNVSVG 196
           L +P  + +   K ++ H+P        SL   NP+  +   I+PL       D+ + +G
Sbjct: 25  LIVPLHTCLFKPKQQHHHQPRFSVSTAQSLLSSNPTLSSHRNIEPLFGLHSKYDTFIDIG 84

Query: 195 SDTNRIDYSNLLRISVRCGDVVLTKIIRSSILKLEEEDVYLKNALVAAYIKLGYLSLVEK 16
            D       NLLRISVR  D  L + + +SILKL  ED +L NALV AY+KLG +    +
Sbjct: 85  ID----HLLNLLRISVRYTDFDLARALHASILKL-GEDTHLGNALVVAYLKLGLVLDAYE 139

Query: 15  VFDSL 1
           VF  L
Sbjct: 140 VFKGL 144


>emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 55/159 (34%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
 Frame = -1

Query: 450 YAWRLSSFMAAXXXXXXXXXXXSLLSIQ------PFNIHSLFIPTSSLVTTKKTKYKHRP 289
           Y WRLS+                LLS+       PF +    +P+ SL +   +K     
Sbjct: 12  YVWRLSNMA--------------LLSVYFPQTPFPFCLSRPTLPSQSLYSLSLSK----- 52

Query: 288 SLFLQNPSKKTSFI--QPLLTPQQFKDSNV-SVGSDTNRIDYSNLLRISVRCGDVVLTKI 118
           + F  + SK  + +   P L+ Q    SN  SV +DT   D+  LL +SVR  DV L K 
Sbjct: 53  TSFSSSRSKPYALLTSHPPLSNQPALLSNFPSVSNDTVN-DHYYLLDLSVRYDDVELIKA 111

Query: 117 IRSSILKLEEEDVYLKNALVAAYIKLGYLSLVEKVFDSL 1
           + +SI KL E D++L NAL+ AY+KLG +    KVF  L
Sbjct: 112 VHASIFKLAE-DIHLANALIVAYLKLGMVPNAYKVFVGL 149


>gb|EXB75955.1| hypothetical protein L484_022634 [Morus notabilis]
          Length = 911

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 42/131 (32%), Positives = 72/131 (54%), Gaps = 22/131 (16%)
 Frame = -1

Query: 336 TSSLVTTKKTKYKHRPS------LFLQNPSKKTSFIQPLLTPQQFK---------DSNV- 205
           +SSL +   +  KHRP        F  + ++  + ++P    QQ +         DS + 
Sbjct: 27  SSSLSSFSLSPLKHRPRHSHNHVFFSASQTQSLACLEPFSIKQQRQQQQQQKPLFDSELF 86

Query: 204 -SVGSDTNRIDYS-----NLLRISVRCGDVVLTKIIRSSILKLEEEDVYLKNALVAAYIK 43
            +  S +N +++      +LL++SVR  DV L K + +S++KL E DVYL N+L++AY+K
Sbjct: 87  ENCSSLSNFVEFDVDGLLHLLQLSVRYNDVELAKAVHASVVKLGE-DVYLGNSLISAYLK 145

Query: 42  LGYLSLVEKVF 10
           LG++S   +VF
Sbjct: 146 LGFVSEAYEVF 156


>ref|XP_006481930.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Citrus sinensis]
          Length = 893

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
 Frame = -1

Query: 207 VSVGSDTNRID-----YSNLLRISVRCGDVVLTKIIRSSILK-LEEEDVYLKNALVAAYI 46
           VS  S+T  ID     + N LR+SV+CG+V L K I +S++K L E+D    N L++AY+
Sbjct: 66  VSPSSNTKVIDVDVDSFFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYL 125

Query: 45  KLGYLSLVEKVFDSL 1
           KLG++S   K+F  L
Sbjct: 126 KLGHVSDAYKIFYGL 140


>ref|XP_006430347.1| hypothetical protein CICLE_v10011036mg [Citrus clementina]
           gi|557532404|gb|ESR43587.1| hypothetical protein
           CICLE_v10011036mg [Citrus clementina]
          Length = 893

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 6/75 (8%)
 Frame = -1

Query: 207 VSVGSDTNRID-----YSNLLRISVRCGDVVLTKIIRSSILK-LEEEDVYLKNALVAAYI 46
           VS  S+T  ID     + N LR+SV+CG+V L K I +S++K L E+D    N L++AY+
Sbjct: 66  VSPSSNTKVIDVDVDSFFNSLRLSVQCGEVSLAKAIHASLIKLLLEQDTRFGNPLISAYL 125

Query: 45  KLGYLSLVEKVFDSL 1
           KLG++S   K+F  L
Sbjct: 126 KLGHVSDAYKIFYGL 140


>ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
 Frame = -1

Query: 366 PFNIHSLFIPTSSLVTTKKTKYKHRPSLFLQNPSKKTSFI--QPLLTPQQFKDSNV-SVG 196
           PF +    +P+ SL +   +K     + F  + SK  + +   P L+ Q    SN  SV 
Sbjct: 14  PFCLSRPTLPSQSLYSLSLSK-----TSFSSSRSKPYALLTSHPPLSNQPALLSNFPSVS 68

Query: 195 SDTNRIDYSNLLRISVRCGDVVLTKIIRSSILKLEEEDVYLKNALVAAYIKLGYLSLVEK 16
           +DT   D+  LL +SVR  DV L K + +SI KL E D++L NAL+ AY+KLG +    K
Sbjct: 69  NDTVN-DHYYLLDLSVRYDDVELIKAVHASIFKLAE-DIHLANALIVAYLKLGMVPNAYK 126

Query: 15  VFDSL 1
           VF  L
Sbjct: 127 VFVGL 131


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