BLASTX nr result

ID: Atropa21_contig00029052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00029052
         (501 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB63581.1| SWI/SNF complex subunit SWI3D [Morus notabilis]         57   3e-06
ref|XP_004167350.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    57   3e-06
ref|XP_004150410.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    57   3e-06
ref|XP_004299098.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    56   4e-06
ref|XP_006487157.1| PREDICTED: SWI/SNF complex subunit SWI3D-lik...    55   7e-06
ref|XP_006423245.1| hypothetical protein CICLE_v10027804mg [Citr...    55   7e-06

>gb|EXB63581.1| SWI/SNF complex subunit SWI3D [Morus notabilis]
          Length = 1006

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 24/37 (64%), Positives = 27/37 (72%)
 Frame = -2

Query: 155 NSCLVDCSSRRYHSQKQEAFNLCLVCFNNGKFDFEIS 45
           NSC  DCS +RYH QKQ  F+LC  CFNNGKFD  +S
Sbjct: 317 NSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMS 353


>ref|XP_004167350.1| PREDICTED: SWI/SNF complex subunit SWI3D-like, partial [Cucumis
           sativus]
          Length = 835

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 155 NSCLVDCSSRRYHSQKQEAFNLCLVCFNNGKFDFEIS 45
           NSC  DCS +RYH QK+  F+LC  CFNNGKFD ++S
Sbjct: 310 NSCSADCSRKRYHCQKRADFDLCSECFNNGKFDSDMS 346


>ref|XP_004150410.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Cucumis sativus]
          Length = 1024

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 155 NSCLVDCSSRRYHSQKQEAFNLCLVCFNNGKFDFEIS 45
           NSC  DCS +RYH QK+  F+LC  CFNNGKFD ++S
Sbjct: 310 NSCSADCSRKRYHCQKRADFDLCSECFNNGKFDSDMS 346


>ref|XP_004299098.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Fragaria vesca
           subsp. vesca]
          Length = 1002

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/37 (64%), Positives = 27/37 (72%)
 Frame = -2

Query: 155 NSCLVDCSSRRYHSQKQEAFNLCLVCFNNGKFDFEIS 45
           NSC  DCS +RYH QKQ  F+LC  CFNNGKFD  +S
Sbjct: 301 NSCSADCSRKRYHCQKQADFDLCSDCFNNGKFDSGMS 337


>ref|XP_006487157.1| PREDICTED: SWI/SNF complex subunit SWI3D-like [Citrus sinensis]
          Length = 1038

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -2

Query: 155 NSCLVDCSSRRYHSQKQEAFNLCLVCFNNGKFDFEIS 45
           NSC  DCS +RYH QKQ  F+LC  CFNNGKF  ++S
Sbjct: 323 NSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMS 359


>ref|XP_006423245.1| hypothetical protein CICLE_v10027804mg [Citrus clementina]
           gi|557525179|gb|ESR36485.1| hypothetical protein
           CICLE_v10027804mg [Citrus clementina]
          Length = 851

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -2

Query: 155 NSCLVDCSSRRYHSQKQEAFNLCLVCFNNGKFDFEIS 45
           NSC  DCS +RYH QKQ  F+LC  CFNNGKF  ++S
Sbjct: 136 NSCSADCSRKRYHCQKQADFDLCTDCFNNGKFGSDMS 172


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