BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028947
         (1068 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366...   137   2e-60
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   161   1e-55
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]         146   1e-52
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   151   2e-50
emb|CCH50954.1| T1.2 [Malus x robusta]                                154   3e-50
emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-dir...   120   7e-48
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...   120   5e-47
ref|XP_005753988.1| PREDICTED: RNA-directed DNA polymerase from ...   118   5e-47
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   114   2e-46
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...   114   2e-46
emb|CDJ81301.1| unnamed protein product [Haemonchus contortus]        111   3e-45
gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]       119   1e-44
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc...   144   2e-44
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]     143   2e-44
emb|CCH50976.1| T4.15 [Malus x robusta]                               181   4e-43
emb|CDJ93833.1| RNA-directed DNA polymerase (reverse transcripta...   104   8e-42
emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcripta...   109   3e-40
emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcripta...   117   1e-39
emb|CDJ90126.1| RNA-directed DNA polymerase (reverse transcripta...   101   1e-36
gb|ETN72940.1| reverse transcriptase, partial [Necator americanus]     97   1e-36

>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
           chalumnae]
          Length = 1500

 Score =  137 bits (345), Expect(4) = 2e-60
 Identities = 69/145 (47%), Positives = 100/145 (68%), Gaps = 6/145 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------ 458
           ++KM+  +AT  +E+ ++ +K  ++ G   LTRL+  I+   +M  EWR S++       
Sbjct: 370 MKKMKNRKATGPDEVPIETFKEMKEMGLVVLTRLYRAIWEEGKMPTEWRESTLVPVFKRK 429

Query: 457 GIV*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
           G V + NNYRGI L+SH MK+WERI+E R+RK V ISEN FGF  GRST +AI  ++ L+
Sbjct: 430 GDVQDCNNYRGIALMSHAMKLWERIIEKRLRKLVQISENQFGFCQGRSTIDAIFALKILM 489

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIP 203
           E+Y +K +DLHMVF+ LEKAYD++P
Sbjct: 490 EKYKEKRKDLHMVFVDLEKAYDRVP 514



 Score = 70.9 bits (172), Expect(4) = 2e-60
 Identities = 28/63 (44%), Positives = 46/63 (73%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEEG 714
           ++ + G++ +YR+A+ RERK RD +QVK IKD  G+V++++  ++ RW+ YF KLLNEE 
Sbjct: 283 LDSREGEKMVYRIARARERKKRDFDQVKVIKDSEGQVILDENKVKERWREYFEKLLNEEN 342

Query: 713 DND 705
             +
Sbjct: 343 PRE 345



 Score = 65.1 bits (157), Expect(4) = 2e-60
 Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 17/84 (20%)
 Frame = -1

Query: 201 GRSWRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSPL---- 34
           G  W C+  RG+   YIR +KDMY+G K  +R+  G +  FP+ +G+ QGS LSP     
Sbjct: 516 GLIWWCMRKRGIPEVYIRLVKDMYQGSKIWVRSACGTTTSFPVKVGVRQGSALSPFLFIL 575

Query: 33  -------------P*CMLFADDIV 1
                        P CMLFADDI+
Sbjct: 576 VLDTLTKDIQKEPPWCMLFADDIM 599



 Score = 29.3 bits (64), Expect(4) = 2e-60
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -3

Query: 1060 WWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAKITTF 896
            WWN +VQE  + KK  +    ++     ++++ + Y   K++ K  V  AK+  +
Sbjct: 226  WWNEDVQEVTKDKKIKFKRWQKT----RQKEDLDEYVIVKRQTKRVVAKAKVMAY 276


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
            domestica]
          Length = 622

 Score =  161 bits (407), Expect(2) = 1e-55
 Identities = 114/317 (35%), Positives = 166/317 (52%), Gaps = 25/317 (7%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAKITTFE*ST 884
            WWWN EV+ K E  K  Y    +  DE     N ERY+  K++AK AV  AK+  ++   
Sbjct: 27   WWWNEEVKAKKECCKALYK---DRTDE-----NGERYRKAKQEAKKAVREAKLAAYDDMY 78

Query: 883  KVGIESCIGSPR*ERGSLVT*IK*STSRMRMAKC**KMHTLDGDGRRTSISS*MK---KG 713
            K  +++  G    +   L    +  T  +   +C       D DG+  +  + +K   +G
Sbjct: 79   K-RLDTKEGEL--DIYKLARAREKKTRDLNQVRC-----IKDEDGKVLATENAVKDKWRG 130

Query: 712  IMISCWGVRAFRES*RLWVL*VHKGCRG*GTIRKMRK------------GRATRTNEILV 569
               + +       S  L  L   + CR     R++RK             +A   ++I +
Sbjct: 131  YFHNLFN-EGHERSASLGELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAVGPDDIPI 189

Query: 568  DFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------GIV*NYNNYRGINLLSH 407
            + WK   + G T L  LFN I +T +M  EWR S +       G V N  NYRGI L+SH
Sbjct: 190  EVWKVLGETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMSH 249

Query: 406  TMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLVEQYMDKTRDLHMVFISL 227
            TMK+WER++E R+R++  +S+N FGF+PGRST EAI+L+RRL+E+Y D  +DLHMVFI L
Sbjct: 250  TMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDL 309

Query: 226  EKAYDKIP----WEVLE 188
            EKAYD++     W +LE
Sbjct: 310  EKAYDRVSRDIIWRILE 326



 Score = 83.6 bits (205), Expect(2) = 1e-55
 Identities = 43/81 (53%), Positives = 52/81 (64%), Gaps = 17/81 (20%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP-------- 37
           WR LE +G+ V+YI+AIKDMYEG KT +RT  G +E FPI +GLHQGS+LSP        
Sbjct: 322 WRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQGSSLSPYLFALVMD 381

Query: 36  ---------LP*CMLFADDIV 1
                    +P CMLFA DIV
Sbjct: 382 ELTGHIQDDIPWCMLFAYDIV 402


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score =  146 bits (369), Expect(3) = 1e-52
 Identities = 74/158 (46%), Positives = 105/158 (66%), Gaps = 10/158 (6%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMAGIV*NY 440
           + +M+  RA   + I ++ WK+  +     LT+LFN I R+ +M  EWR S++  I  N 
Sbjct: 63  LNQMKNDRAVGPDNIPIEVWKDLGEKDINWLTKLFNEILRSKKMPGEWRKSTLVPIYKNK 122

Query: 439 N------NYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
                  NYRGI L++HTMK+WER++E  +RK+  ++EN FGF+ GRS TEAI+L+RR++
Sbjct: 123 GDIQSCENYRGIKLMTHTMKLWERVIERGLRKETQVTENQFGFMSGRSITEAIYLLRRMM 182

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIP----WEVLEMFRV 176
           E+Y    RDLHMVFI LEKAYD++P    W+VLE  RV
Sbjct: 183 ERYRSNKRDLHMVFIDLEKAYDRVPREVLWKVLEKMRV 220



 Score = 73.2 bits (178), Expect(3) = 1e-52
 Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 17/81 (20%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLS--------- 40
           W+ LE   + ++YIRAIKDMY+G  T ++T  G +E FPI +GLHQGS+LS         
Sbjct: 212 WKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEFPIGIGLHQGSSLSPYLFTIVLE 271

Query: 39  --------PLP*CMLFADDIV 1
                   P+P C+LFADDIV
Sbjct: 272 VLTEHIQEPVPWCILFADDIV 292



 Score = 35.8 bits (81), Expect(3) = 1e-52
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = -2

Query: 800 DENGEVLIEDAHIRRRWQTYFHKLLNE 720
           D++GEVL ++  I  RW++YF++L NE
Sbjct: 2   DKDGEVLAQEEKINERWKSYFYELFNE 28


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 517

 Score =  151 bits (382), Expect(2) = 2e-50
 Identities = 102/309 (33%), Positives = 157/309 (50%), Gaps = 13/309 (4%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNE---RYKATKKKAKLAVITAKITTFE 893
            WWWN  VQ KV  K+D +        +  + KN E   +YK  +K+AK  V  A+   FE
Sbjct: 31   WWWNDNVQSKVRIKRDCFK-------DWSRCKNVETWDKYKIARKEAKKVVSEARTQAFE 83

Query: 892  *STKVGIESCIGSPR*ERGSLVT*IK*STSRMRMAKC**KMHTLDGDGRRTSISS*MKKG 713
                 G+   +G+   E+       K S  R R  +   ++  +  +  R  +    ++G
Sbjct: 84   -----GLYQSLGTKEGEKSIY----KLSKGRERKTRDLDQVKCIKDEEGRVLVRH--RRG 132

Query: 712  IMISCWGVRAFRES*RLWVL*VHKGCRG*GTIRKMRKGRATRTNEILVDFWKNARKAGTT 533
                 +  R      R               +++M    A   + I ++ WK+    GT 
Sbjct: 133  GPNYNYYRRIQEHEVR-------------EALKRMGSDEAVGPDNIPIEVWKSLGDRGTV 179

Query: 532  *LTRLFNIIFRTSRMREEWR*SSMA------GIV*NYNNYRGINLLSHTMKVWERIVEIR 371
             L  LFN I RT +M +EWR S++       G + N  NYRGI L+SHTMK+WER+++ R
Sbjct: 180  WLANLFNEIIRTKKMSDEWRRSTLIPIDKNKGDIQNCANYRGIKLMSHTMKLWERVIKRR 239

Query: 370  MRKDVSISEN*FGFIPGRSTTEAIHLVRRLVEQYMDKTRDLHMVFISLEKAYDKIP---- 203
            +RK+  +++N FGF+ GRST EAI+L++R++E+Y    +DLH+VF  LEK YD++P    
Sbjct: 240  LRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERYRTDKKDLHLVFFDLEKGYDRVPREIL 299

Query: 202  WEVLEMFRV 176
            W+ LE  RV
Sbjct: 300  WKALEKKRV 308



 Score = 75.5 bits (184), Expect(2) = 2e-50
 Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 17/81 (20%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP-------- 37
           W+ LE + + ++YIRAIKDMYE   T ++T  G +E FPI +GLHQGSTL+P        
Sbjct: 300 WKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPITIGLHQGSTLTPYLFTLVLD 359

Query: 36  ---------LP*CMLFADDIV 1
                     P CMLFADD+V
Sbjct: 360 VLTEHIQELAPRCMLFADDVV 380


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score =  154 bits (390), Expect(2) = 3e-50
 Identities = 106/304 (34%), Positives = 157/304 (51%), Gaps = 12/304 (3%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAKITTFE*ST 884
            WWWN EVQ KV+AKK+   AL + + +    +N ERY+  K++AK A+   K+       
Sbjct: 64   WWWNEEVQTKVKAKKECCKALYKDMTD----ENGERYRRAKQEAKKALDIYKLAKVR-EK 118

Query: 883  KVGIESCIGSPR*ERGSLVT*IK*STSRMRMAKC**KMHTLDGDGRR--TSISS*MKKGI 710
            K    + +   + E G ++        R+R        H L  +G    TS+        
Sbjct: 119  KTRDLNQVRCIKDEDGKVLATENAVKDRLRDY-----FHNLFNEGHEWSTSLGELSNSEE 173

Query: 709  MISCWGVRAFRES*RLWVL*VHKGCRG*GTIRKMRKGRATRTNEILVDFWKNARKAGTT* 530
              + +  R  R+   +  L            +KM+  +A   N+I +  WK   + G T 
Sbjct: 174  YRNYFFYRRIRKEEVVVAL------------KKMKHIKAVGPNDIPIKVWKVLGETGITW 221

Query: 529  LTRLFNIIFRTSRMREEWR*SSMA------GIV*NYNNYRGINLLSHTMKVWERIVEIRM 368
            LT LFN I +  +M  EWR S++       G + N  NYRGI L+SHTMK+  R++E R+
Sbjct: 222  LTDLFNRILKMKKMSNEWRNSTLVPIYKNKGDIQNCMNYRGIKLMSHTMKLLARVIEHRL 281

Query: 367  RKDVSISEN*FGFIPGRSTTEAIHLVRRLVEQYMDKTRDLHMVFISLEKAYDKIP----W 200
            R+   +S+N F F+PG ST EAI+L+R+L+E+Y D   DLHMVFI LEK YD++P    W
Sbjct: 282  RQKTRVSDNQFKFMPGCSTMEAIYLLRKLMEKYRDGKNDLHMVFIDLEKVYDRVPRDILW 341

Query: 199  EVLE 188
             +LE
Sbjct: 342  RILE 345



 Score = 72.0 bits (175), Expect(2) = 3e-50
 Identities = 32/52 (61%), Positives = 40/52 (76%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP 37
           WR LE +G+ V+YI+AIKDMY+G KT +RT  G  E FPI + LHQGS+LSP
Sbjct: 341 WRILEKKGVRVAYIQAIKDMYDGAKTAVRTYEGQIESFPITVRLHQGSSLSP 392


>emb|CDJ80644.1| Endonuclease exonuclease phosphatase and RNA-directed DNA
           polymerase (reverse transcriptase) domain containing
           protein [Haemonchus contortus]
          Length = 816

 Score =  120 bits (300), Expect(4) = 7e-48
 Identities = 62/149 (41%), Positives = 97/149 (65%), Gaps = 6/149 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------ 458
           I KM+ G+AT  + + ++ WK   + G   LTR  N +    R+ + WR S++       
Sbjct: 477 IGKMKVGKATGPDGVPIEAWKALGEHGIKWLTRFLNTVTAEGRIPDAWRRSTIVPIFKQK 536

Query: 457 GIV*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
           G   + +NYRGI L +HTMK++ER+V+ R+R+ V ISE  FGF+P RSTT+AI + R+++
Sbjct: 537 GDAMDCSNYRGIRLTAHTMKLYERLVDSRLRELVPISEGQFGFMPERSTTDAIFIARQIM 596

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIPWEVL 191
           E+Y +K R  ++ F+ LEKA+D++P EVL
Sbjct: 597 EKYREKRRPCYLAFLDLEKAFDRLPREVL 625



 Score = 57.0 bits (136), Expect(4) = 7e-48
 Identities = 23/59 (38%), Positives = 41/59 (69%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           ++ + G++ ++RLAK R R ++D+  VK +++  G +L +   +RRRW+ YF +LLNEE
Sbjct: 391 LDSREGEKFVFRLAKARHRATQDIRVVKAVRNSEGAILRKPGEVRRRWKEYFDRLLNEE 449



 Score = 48.9 bits (115), Expect(4) = 7e-48
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP 37
           W  L  R +    I  +KDMY+G  T IRT  G +    + +G+HQGS LSP
Sbjct: 626 WSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGQTGAIDVTVGVHQGSALSP 677



 Score = 33.9 bits (76), Expect(4) = 7e-48
 Identities = 20/52 (38%), Positives = 27/52 (51%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAK 908
            W+WN EVQ  V  KK AY    ++       ++   YK +K+ AK AV  AK
Sbjct: 333  WFWNDEVQRVVREKKLAYKRWQKT----RALEDLAAYKTSKRLAKAAVAKAK 380


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score =  120 bits (301), Expect(4) = 5e-47
 Identities = 58/145 (40%), Positives = 95/145 (65%), Gaps = 6/145 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------ 458
           +R+M+ G+A   ++I ++ WK+    G   LT LFN I  T +M  +WR S +       
Sbjct: 512 LRRMKNGKAVGPDDIPIEAWKSLGSLGVLMLTDLFNHILNTGKMPHQWRLSFITPIYKGR 571

Query: 457 GIV*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
           G V +  +YRGI L+SHTMK++ER++++R+R++ ++SE+ +GF PG  T +AI  +R L+
Sbjct: 572 GSVQDCGSYRGIKLMSHTMKLFERMIDLRLRRECTVSESQYGFQPGSGTMDAIFALRTLM 631

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIP 203
           E Y +K R LH+ F+ L+KA+D +P
Sbjct: 632 EAYREKRRALHVAFLDLQKAFDCVP 656



 Score = 55.8 bits (133), Expect(4) = 5e-47
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 17/80 (21%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSPL------- 34
           W  L S+G+  +YI  I+ MY    + +RT  GD+  FPI +G+HQGS LSP        
Sbjct: 661 WWALRSKGIPEAYIEIIRGMYHDSASMVRTAVGDTRPFPITVGVHQGSALSPFLFNVVLD 720

Query: 33  ----------P*CMLFADDI 4
                     P  M++ADDI
Sbjct: 721 TVSAHIQDQPPWLMMYADDI 740



 Score = 44.7 bits (104), Expect(4) = 5e-47
 Identities = 16/54 (29%), Positives = 35/54 (64%)
 Frame = -2

Query: 878 GDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           G + +Y+LA+ R++ ++D+ +   ++D  G +L     ++ RW++YF +LLN +
Sbjct: 431 GQKLIYKLARSRDKVTQDIAKCLCVRDSQGTLLCNHDSVKERWRSYFQELLNTQ 484



 Score = 36.2 bits (82), Expect(4) = 5e-47
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAK 908
            WWWN EVQE    KK A+    ES       ++   Y   K+ +K AV  A+
Sbjct: 368  WWWNDEVQEVTREKKAAFKKWQES----NSPEDRLEYTVAKRASKRAVARAR 415


>ref|XP_005753988.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Pundamilia nyererei]
          Length = 569

 Score =  118 bits (295), Expect(4) = 5e-47
 Identities = 61/149 (40%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------ 458
           ++ M+ G+AT  ++I  + WK   + G   L  LFN I R   +   W  S         
Sbjct: 193 VKNMKNGKATGPDDIPAEVWKLLGRQGALVLASLFNSIIRDGTVPAAWSTSITVPIWKGK 252

Query: 457 GIV*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
           G V   +NYR I LLSHTMKV+ERI++ RMR+ V+++ N  GFI GR TT+AIH  R L+
Sbjct: 253 GDVAECSNYRPIRLLSHTMKVFERIIDARMREIVNLTPNQCGFIRGRGTTDAIHAARLLL 312

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIPWEVL 191
           E++ +K++ +HM F+ LEKA+D++P +++
Sbjct: 313 EKHREKSKTIHMAFLDLEKAFDRVPHDLI 341



 Score = 53.5 bits (127), Expect(4) = 5e-47
 Identities = 25/55 (45%), Positives = 33/55 (60%)
 Frame = -2

Query: 881 GGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           GG  K+YRLA  R R ++D+ QVK+IKD N + L +   I  RW  YF  + N E
Sbjct: 111 GGANKIYRLASSRHRATQDIGQVKHIKDANHQTLRDPPAILNRWSEYFSDICNVE 165



 Score = 46.2 bits (108), Expect(4) = 5e-47
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 17/80 (21%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSPL------- 34
           W  L+S G+  +Y++  K +Y  V + +R+  G S  F I +G+HQGS LSPL       
Sbjct: 342 WHSLQSHGVPEAYVKWTKLLYRQVTSVVRSPVGTSPPFNINVGIHQGSALSPLLFILCVD 401

Query: 33  ----------P*CMLFADDI 4
                     P  +L+ADD+
Sbjct: 402 TATADLQSPHPWTLLYADDV 421



 Score = 39.3 bits (90), Expect(4) = 5e-47
 Identities = 18/57 (31%), Positives = 32/57 (56%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAKITTFE 893
            WWWN  VQ+ ++ KK A    ++S  +     + ++Y+A +  AK AV  AK + ++
Sbjct: 49   WWWNDSVQQTIKEKKSALKVWLKSRSD----GDYQQYRALRSAAKKAVAAAKASHYD 101


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score =  114 bits (284), Expect(4) = 2e-46
 Identities = 54/145 (37%), Positives = 92/145 (63%), Gaps = 6/145 (4%)
 Frame = -3

Query: 619  IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------ 458
            +R+M+  +A   ++I ++ WK+    G   LT LFN +  T  M  +WR S +       
Sbjct: 779  LRRMKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGR 838

Query: 457  GIV*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
            G V +  +YRG+ ++SHTMK++ER++++R+R++ ++SE  +GF PG  T +AI  +R L+
Sbjct: 839  GSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLM 898

Query: 277  EQYMDKTRDLHMVFISLEKAYDKIP 203
            E Y +K R LH+ F+ L+KA+D +P
Sbjct: 899  EAYREKRRALHVAFLDLQKAFDCVP 923



 Score = 55.8 bits (133), Expect(4) = 2e-46
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 17/80 (21%)
 Frame = -1

Query: 192  WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSPL------- 34
            W  L  +G+  +YI  I+DMY    + +RT  GD++ FPI +GLHQGS LSP        
Sbjct: 928  WWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFNVVLD 987

Query: 33   ----------P*CMLFADDI 4
                      P  M++ADDI
Sbjct: 988  TVSANIQDQPPWLMMYADDI 1007



 Score = 48.1 bits (113), Expect(4) = 2e-46
 Identities = 19/59 (32%), Positives = 37/59 (62%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           +E   G + +Y+LA+ R++ ++D+ +   +KD  G +L   A ++ RW+ YF +LLN +
Sbjct: 693 LETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFKELLNTQ 751



 Score = 37.4 bits (85), Expect(4) = 2e-46
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAK 908
            WWWN EVQE +  KK A+    +S       ++   Y A K+ +K AV  A+
Sbjct: 635  WWWNDEVQEVIREKKTAFKKWQQS----NSPEDRLEYIAAKRASKRAVARAR 682


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score =  114 bits (284), Expect(4) = 2e-46
 Identities = 54/145 (37%), Positives = 92/145 (63%), Gaps = 6/145 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------ 458
           +R+M+  +A   ++I ++ WK+    G   LT LFN +  T  M  +WR S +       
Sbjct: 511 LRRMKNRKAVGPDDIPIEAWKSLGSLGVLILTDLFNRVLNTGTMPHQWRYSYITPIYKGR 570

Query: 457 GIV*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
           G V +  +YRG+ ++SHTMK++ER++++R+R++ ++SE  +GF PG  T +AI  +R L+
Sbjct: 571 GSVQDCGSYRGVKIMSHTMKLFERMIDLRLRRECTVSECQYGFQPGSGTLDAIFAIRTLM 630

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIP 203
           E Y +K R LH+ F+ L+KA+D +P
Sbjct: 631 EAYREKRRALHVAFLDLQKAFDCVP 655



 Score = 55.8 bits (133), Expect(4) = 2e-46
 Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 17/80 (21%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSPL------- 34
           W  L  +G+  +YI  I+DMY    + +RT  GD++ FPI +GLHQGS LSP        
Sbjct: 660 WWALRFKGIPEAYIDIIRDMYRDSVSMVRTAVGDTKPFPISVGLHQGSALSPFLFNVVLD 719

Query: 33  ----------P*CMLFADDI 4
                     P  M++ADDI
Sbjct: 720 TVSANIQDQPPWLMMYADDI 739



 Score = 48.1 bits (113), Expect(4) = 2e-46
 Identities = 19/59 (32%), Positives = 37/59 (62%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           +E   G + +Y+LA+ R++ ++D+ +   +KD  G +L   A ++ RW+ YF +LLN +
Sbjct: 425 LETAEGQKLIYKLARARDKATQDIAKCLSVKDSQGTLLCNHASVKERWRCYFKELLNTQ 483



 Score = 37.4 bits (85), Expect(4) = 2e-46
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAK 908
            WWWN EVQE +  KK A+    +S       ++   Y A K+ +K AV  A+
Sbjct: 367  WWWNDEVQEVIREKKTAFKKWQQS----NSPEDRLEYIAAKRASKRAVARAR 414


>emb|CDJ81301.1| unnamed protein product [Haemonchus contortus]
          Length = 499

 Score =  111 bits (277), Expect(4) = 3e-45
 Identities = 59/149 (39%), Positives = 93/149 (62%), Gaps = 6/149 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMAGIV*-- 446
           I KM+ G+AT    + ++ WK   + G   LT+  N +    R+ + WR S++  I    
Sbjct: 267 IGKMKVGKATGPGGVPIEAWKALGEHGIKWLTKFLNTVTAEGRIPDAWRRSTIVPIFKRK 326

Query: 445 ----NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
               + +NYRGI L +HTMK++ER+V+ R+R  V ISE  FGF+P RSTT+AI + R+++
Sbjct: 327 GDPMDCSNYRGIRLTAHTMKLYERMVDSRLRGLVPISEKLFGFMPERSTTDAIFIARQIM 386

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIPWEVL 191
            +Y +  R  ++ F+ LEKA+D++P EVL
Sbjct: 387 GKYREMRRPCYLAFLDLEKAFDRLPREVL 415



 Score = 56.6 bits (135), Expect(4) = 3e-45
 Identities = 23/59 (38%), Positives = 40/59 (67%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           ++ + G++ ++RLAK R R ++D+  VK +++  G +L +   +RRRW+ YF K LNEE
Sbjct: 176 LDSREGEKFVFRLAKARHRATQDIGVVKSVRNSEGAILRKPGEVRRRWKEYFDKFLNEE 234



 Score = 48.5 bits (114), Expect(4) = 3e-45
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP 37
           W  L  R +    I  +KDMY+G  T IRT  G +    + +G+HQGS LSP
Sbjct: 416 WSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGHTGAIDVTVGVHQGSALSP 467



 Score = 34.7 bits (78), Expect(4) = 3e-45
 Identities = 21/52 (40%), Positives = 27/52 (51%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAK 908
            W+WN EVQ  V  KK AY    E   +    ++   YK +K+ AK AV  AK
Sbjct: 118  WFWNDEVQRVVREKKLAY----ERWQKTRALEDLAAYKTSKRLAKAAVAKAK 165


>gb|ADI61822.1| endonuclease-reverse transcriptase [Bombyx mori]
          Length = 996

 Score =  119 bits (297), Expect(4) = 1e-44
 Identities = 58/149 (38%), Positives = 96/149 (64%), Gaps = 6/149 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------ 458
           + KM   +AT  + I V+ WK  R+ G   LT+LFN + R+S+M   WR S++       
Sbjct: 514 LEKMPNKKATGPDGIPVEAWKCLREHGIETLTKLFNCVLRSSKMPAAWRLSTIVPIYKGK 573

Query: 457 GIV*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
           G     +NYRGI LLSHTMK++ER+++ R+R + S+S+N +GF+ G STT+ +  +  + 
Sbjct: 574 GSKYECSNYRGIKLLSHTMKLYERVIDSRLRSECSLSKNHYGFVQGLSTTDPMFALNTIA 633

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIPWEVL 191
           E+Y +K R L++ F+ +EKA+D++P + +
Sbjct: 634 EEYREKLRPLYVAFLDMEKAFDRVPRDTI 662



 Score = 47.4 bits (111), Expect(4) = 1e-44
 Identities = 24/81 (29%), Positives = 45/81 (55%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEEG 714
           +E K G + +++LAK R   +RD  + + +KD NGE+L  D+ +   W  Y+ +LLN   
Sbjct: 428 LETKEGQKCIFKLAKQRCWSTRDPTRCRAVKDPNGELLYGDSDVLSAWHQYYEQLLNP-- 485

Query: 713 DNDIVLGS*SISRVVETLGIV 651
                  +  +++VV  +G++
Sbjct: 486 ----TQAAIQLTKVVRNIGLI 502



 Score = 45.4 bits (106), Expect(4) = 1e-44
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP 37
           W  L  + +   Y+  I DMY   ++ +RTV G ++   +  GLHQGS LSP
Sbjct: 663 WWSLRKKNVPEHYVNVIIDMYRDARSMVRTVVGQTKPIAVAEGLHQGSVLSP 714



 Score = 37.4 bits (85), Expect(4) = 1e-44
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAV 920
            WWW   VQ  ++ KKDA+     +    +  ++ ERYK  KK+ K  V
Sbjct: 370  WWWTEAVQNAIQKKKDAFKTWQST----QTSEDQERYKRIKKETKKIV 413


>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
          Length = 1134

 Score =  144 bits (364), Expect(2) = 2e-44
 Identities = 75/155 (48%), Positives = 105/155 (67%), Gaps = 9/155 (5%)
 Frame = -3

Query: 613 KMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMAGIV*NYN- 437
           +M+ G+A   + I ++ WK         LT+LFN+IFR ++M EEWR S +  I  N   
Sbjct: 324 RMKGGKAMGPDCIPIEVWKGLGDIAIVWLTKLFNLIFRANKMPEEWRRSILVPIFKNKGD 383

Query: 436 -----NYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLVEQ 272
                NYRGI L+SHTMK+WER++E R+R+  S+++N FGF+PGRST EAI LVR+L+ +
Sbjct: 384 VQICTNYRGIKLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMVR 443

Query: 271 YMDKTRDLHMVFISLEKAYDKIP---WEVLEMFRV 176
           Y ++ +DLHMVFI LEKAY+KIP   W  L+  +V
Sbjct: 444 YREQKKDLHMVFIDLEKAYNKIPRNLWWALDKHKV 478



 Score = 62.8 bits (151), Expect(2) = 2e-44
 Identities = 34/81 (41%), Positives = 43/81 (53%), Gaps = 17/81 (20%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP-------- 37
           W  L+   +   YI  IKDMY+   T +RT   D++ FPI +GLHQGS LSP        
Sbjct: 470 WWALDKHKVPAKYITLIKDMYDNAVTSVRTSDIDTDDFPIKIGLHQGSALSPYLFALLMD 529

Query: 36  ---------LP*CMLFADDIV 1
                    +P CMLFADD+V
Sbjct: 530 EVTRDIQGDIPWCMLFADDVV 550


>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
          Length = 605

 Score =  143 bits (360), Expect(2) = 2e-44
 Identities = 71/135 (52%), Positives = 96/135 (71%), Gaps = 6/135 (4%)
 Frame = -3

Query: 577 ILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMAGIV*NYN------NYRGINL 416
           I ++ WK         LT+LFN+IFR ++M EEWR S +  I  N        NYRGI L
Sbjct: 6   IPIEVWKGLGDIAIVWLTKLFNLIFRANKMPEEWRRSILVPIFKNKEDVQGCTNYRGIKL 65

Query: 415 LSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLVEQYMDKTRDLHMVF 236
           +SHTMK+WER++E R+R+  S+++N FGF+PGRST EAI LVR+L+E+Y ++ +DLHMVF
Sbjct: 66  MSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERYREQKKDLHMVF 125

Query: 235 ISLEKAYDKIPWEVL 191
           I LEK+YDKIP  V+
Sbjct: 126 IDLEKSYDKIPRNVM 140



 Score = 64.3 bits (155), Expect(2) = 2e-44
 Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 17/81 (20%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP-------- 37
           W  L+   +   YI  IKDMY+ V T +RT   D++ FPI +GLHQGS LSP        
Sbjct: 141 WWALKKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYLFALVMD 200

Query: 36  ---------LP*CMLFADDIV 1
                    +P CMLFADD+V
Sbjct: 201 EVTRDIQGDIPWCMLFADDVV 221


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  181 bits (459), Expect = 4e-43
 Identities = 119/317 (37%), Positives = 175/317 (55%), Gaps = 25/317 (7%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAKITTFE*ST 884
            WWWN EVQ KV+AKK+   AL +   +    +N ERY+  K++AK AV  AK+  ++   
Sbjct: 419  WWWNEEVQTKVKAKKECCKALYKDRTD----ENGERYRKAKQEAKKAVREAKLAAYDDMY 474

Query: 883  KVGIESCIGSPR*ERGSLVT*IK*STSRMRMAKC**KMHTLDGDGRRTSISS*MK---KG 713
            K  +++  G    +   L    +  T  +   +C       D DG+  +  + +K   +G
Sbjct: 475  K-RLDTKEGEL--DIYKLARAREKKTRDLNQVRC-----IKDEDGKVLATENAVKDRWRG 526

Query: 712  IMISCWGVRAFRES*RLWVL*VHKGCRG*GTIRKMRKG------------RATRTNEILV 569
               + +       S  LW L   + CR     R++RK             +A   ++I +
Sbjct: 527  YFHNLFN-EGHERSASLWELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAIGPDDIPI 585

Query: 568  DFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------GIV*NYNNYRGINLLSH 407
            + WK   + G T LT LFN I +T +M  EWR S++       G V N  NYRGI L+SH
Sbjct: 586  EVWKVLGETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGDVQNCMNYRGIKLMSH 645

Query: 406  TMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLVEQYMDKTRDLHMVFISL 227
            TMK+WER++E R+R++  +S+N FGF+PGRST EAI+L+RRL+E+Y D  +DLHMVFI L
Sbjct: 646  TMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRDGKKDLHMVFIDL 705

Query: 226  EKAYDKIP----WEVLE 188
            EKAYD++P    W +LE
Sbjct: 706  EKAYDRVPRDILWRILE 722


>emb|CDJ93833.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 414

 Score =  104 bits (260), Expect(4) = 8e-42
 Identities = 55/149 (36%), Positives = 89/149 (59%), Gaps = 6/149 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMAGIV*NY 440
           + KM+ G+AT  +++  D WK+        LT  FN +    ++ E W+ S+   I    
Sbjct: 158 LMKMKSGKATGPDDLAADLWKSKGWNPAGWLTEFFNQVVAEKKVPESWQQSTTIPIWKKK 217

Query: 439 NN------YRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
            +      YR I LLSH+MK++ERIV+ R+R  V ++ N  GF+ G ST +AIH  R L+
Sbjct: 218 GSPGDCTCYRPIRLLSHSMKIFERIVDNRIRDIVELTTNQCGFVAGCSTIDAIHATRLLL 277

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIPWEVL 191
           E++ +K R +H+ F+ LEKA+D++P +V+
Sbjct: 278 EKHREKRRPIHLAFLDLEKAFDRVPRDVI 306



 Score = 50.1 bits (118), Expect(4) = 8e-42
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 17/81 (20%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSPL------- 34
           W  L   G+    I  ++ +Y   K+R++T  G S  FPI +G+HQGS LSPL       
Sbjct: 307 WYALRQHGVPEELIEWVRILYTSPKSRVQTAAGTSAEFPISVGVHQGSALSPLLFVVVMD 366

Query: 33  ----------P*CMLFADDIV 1
                     P  +L+ADD++
Sbjct: 367 AITKDLQKPAPWTLLYADDVM 387



 Score = 45.8 bits (107), Expect(4) = 8e-42
 Identities = 20/52 (38%), Positives = 33/52 (63%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYF 738
           +E + G+R +YRLAK R R++ ++ +   I DENG +L +     +RW+ YF
Sbjct: 72  LESREGERYIYRLAKTRNRQTENIEKFFGINDENGYLLTDRRQTLKRWREYF 123



 Score = 38.9 bits (89), Expect(4) = 8e-42
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAY-AALVESVDE*EKRKNNERYKATKKKAKLAVITAKITTF 896
            W W   V++KV  KK  Y A L+E  D+     + +RY+  KK+AK AV + K+  +
Sbjct: 14   WLWTNHVRDKVREKKKQYHAFLIEKTDD-----SWQRYQIAKKEAKKAVASEKVAHY 65


>emb|CDJ85508.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 432

 Score =  109 bits (272), Expect(3) = 3e-40
 Identities = 58/149 (38%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSM------A 458
           I KM+ G+AT  + + ++ W+   + G   LTR  N +    R+ + WR S++       
Sbjct: 94  IGKMKVGKATGPDGVPIEAWEALGEHGIKWLTRFLNTVSAEGRIPDAWRRSAIDPIFKQK 153

Query: 457 GIV*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
           G   + +N RGI L +HT+K++ER+V+ R+R  V ISE+  GF+P RSTT+AI + R+++
Sbjct: 154 GDAMDCSNCRGIRLAAHTIKLYERLVDSRLRDLVPISEDQIGFMPERSTTDAIFIARQIM 213

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIPWEVL 191
           E+Y  K R  ++ F+ LEKA+D++P EVL
Sbjct: 214 EKYRGKRRPCYLAFLDLEKAFDRLPREVL 242



 Score = 56.6 bits (135), Expect(3) = 3e-40
 Identities = 23/59 (38%), Positives = 41/59 (69%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           ++ + G++ ++RLAK R R ++D+  VK +++  G +L +   +RRRW+ YF +LLNEE
Sbjct: 8   LDSREGEKFVFRLAKARHRATQDIGVVKSVRNSEGAILRKPGKVRRRWKEYFDRLLNEE 66



 Score = 48.1 bits (113), Expect(3) = 3e-40
 Identities = 22/52 (42%), Positives = 29/52 (55%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP 37
           W  L  R +    I  +KDMY+G  T IRT  G +    + +G+HQGS LSP
Sbjct: 243 WSALRKRNVPEHLISLVKDMYDGSTTTIRTAHGRTGAIDVTVGVHQGSALSP 294


>emb|CDJ90320.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 1526

 Score =  117 bits (292), Expect(3) = 1e-39
 Identities = 60/147 (40%), Positives = 95/147 (64%), Gaps = 6/147 (4%)
 Frame = -3

Query: 613 KMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------GI 452
           KM+ G+AT  + + +  WK   + G   LTR  N +    R+ + WR S++       G 
Sbjct: 542 KMKVGKATGPDGVPIKAWKALGEHGVKWLTRFLNTVTAKGRIPDAWRRSTIVPIFKQKGD 601

Query: 451 V*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLVEQ 272
             + +NYRGI L +HTMK++ER+V+ R+R+ V ISE  FGF+PGRSTT+AI + R+++ +
Sbjct: 602 AMDCSNYRGIRLAAHTMKLYERLVDSRLRELVPISEKQFGFMPGRSTTDAIFITRQVMGK 661

Query: 271 YMDKTRDLHMVFISLEKAYDKIPWEVL 191
           Y +K R  ++ F+ LEKA+D++P +VL
Sbjct: 662 YREKRRPCYIAFLDLEKAFDRLPRQVL 688



 Score = 49.7 bits (117), Expect(3) = 1e-39
 Identities = 23/52 (44%), Positives = 30/52 (57%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSP 37
           WR L  R +    I  +KDMY+G  T IRT  G +    + +G+HQGS LSP
Sbjct: 689 WRALRKRKVPEHLISLVKDMYDGSTTTIRTPHGQTGAIDVTVGVHQGSALSP 740



 Score = 45.1 bits (105), Expect(3) = 1e-39
 Identities = 20/59 (33%), Positives = 34/59 (57%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           ++ + G++ ++RLAK R   ++D+  VK +K+  G +L         W+ YF  LLNEE
Sbjct: 454 LDSREGEKFVFRLAKARHLATQDIGVVKSVKNSEGAILTXXXXXXXXWEEYFDGLLNEE 512



 Score = 57.4 bits (137), Expect(3) = 8e-11
 Identities = 24/59 (40%), Positives = 40/59 (67%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           ++ + G++ ++RLAK R R +RD+  VK +++  G +L +   +RRRW+ YF  LLNEE
Sbjct: 186 LDSREGEKFVFRLAKARHRATRDIGVVKSVRNSEGAILRKPGEVRRRWEEYFDGLLNEE 244



 Score = 35.4 bits (80), Expect(3) = 8e-11
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAKITTFE 893
            W+WN EVQ  V  KK AY    ++       ++   Y+ +K+ AK AV  AK T  +
Sbjct: 128  WFWNDEVQRVVRQKKSAYKRWQKT----RAPEDLAAYRTSKRLAKAAVAKAKNTEMD 180



 Score = 20.8 bits (42), Expect(3) = 8e-11
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -3

Query: 613 KMRKGRATRTNEILVDFWK 557
           KM+ G+AT  + + ++ WK
Sbjct: 274 KMKVGKATGPDGVPIEAWK 292


>emb|CDJ90126.1| RNA-directed DNA polymerase (reverse transcriptase) domain
           containing protein [Haemonchus contortus]
          Length = 429

 Score =  101 bits (252), Expect(3) = 1e-36
 Identities = 53/149 (35%), Positives = 89/149 (59%), Gaps = 6/149 (4%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMA------ 458
           ++KM+ G+A+  +++  D WK+        LT  FN +    ++ E W+ S+        
Sbjct: 168 LKKMKSGKASGPDDVAADLWKSKGWNPAGWLTEFFNQVVAEKKVPESWQQSTTIPIWKKK 227

Query: 457 GIV*NYNNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLV 278
           G + +   YR I LLSH+MK++ERIV+ R+R  V  + N  GF+   ST +AIH  R L+
Sbjct: 228 GSLGDCTCYRPIRLLSHSMKIFERIVDSRIRDIVEPTTNQCGFVAACSTIDAIHAARLLL 287

Query: 277 EQYMDKTRDLHMVFISLEKAYDKIPWEVL 191
           E++ +K R +H+ F+ LEKA+D++P +V+
Sbjct: 288 EKHREKRRPVHLAFLDLEKAFDRVPRDVI 316



 Score = 50.4 bits (119), Expect(3) = 1e-36
 Identities = 22/59 (37%), Positives = 36/59 (61%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           +E + G+R +YRLAK R R++ D+ +   I DENG +L +   + +RW+ YF  +   E
Sbjct: 82  LESRDGERYVYRLAKTRNRQTEDIEKFFGINDENGRLLTDRRQVLKRWREYFANISTVE 140



 Score = 50.1 bits (118), Expect(3) = 1e-36
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 17/81 (20%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSPL------- 34
           W  L   G+    I  ++ +Y   K+R++T  G S  FPI +G+HQGS LSPL       
Sbjct: 317 WYALRQHGVPEELIEWVRILYTSPKSRVQTAAGTSAEFPISVGVHQGSALSPLLFVVVMD 376

Query: 33  ----------P*CMLFADDIV 1
                     P  +L+ADD++
Sbjct: 377 TITKDLQKPAPWTLLYADDVM 397


>gb|ETN72940.1| reverse transcriptase, partial [Necator americanus]
          Length = 422

 Score = 97.1 bits (240), Expect(4) = 1e-36
 Identities = 56/145 (38%), Positives = 86/145 (59%)
 Frame = -3

Query: 619 IRKMRKGRATRTNEILVDFWKNARKAGTT*LTRLFNIIFRTSRMREEWR*SSMAGIV*NY 440
           + KM+  +AT  ++I VD WK     G T        +++TS     W+         + 
Sbjct: 176 LAKMKSNKATGPDDIPVDIWKLLGDRGRT------PDVWQTSVTVPVWKGKRDIA---DC 226

Query: 439 NNYRGINLLSHTMKVWERIVEIRMRKDVSISEN*FGFIPGRSTTEAIHLVRRLVEQYMDK 260
            +YR I LL HTMKV+ER++E R+RK VSIS +  GF+   ST +AIH VR  +E++ ++
Sbjct: 227 TSYRPIRLLCHTMKVFERVLEARLRKIVSISLHQCGFVKDCSTMDAIHAVRIFLEKHRER 286

Query: 259 TRDLHMVFISLEKAYDKIPWEVLEM 185
            R +H+ F+ LEKA+D++P E+L M
Sbjct: 287 NRSVHLAFLDLEKAFDRVPHELLWM 311



 Score = 48.1 bits (113), Expect(4) = 1e-36
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = -2

Query: 893 VEHKGGDRKLYRLAKIRERKSRDLNQVKYIKDENGEVLIEDAHIRRRWQTYFHKLLNEE 717
           ++ + G+R +YRL + R R + D+   K +K  +G VL     I  RW+ Y++   NEE
Sbjct: 90  LDTREGERAVYRLVRARHRSTSDMEHTKIVKGADGAVLRRSGQILERWREYYNHFCNEE 148



 Score = 44.3 bits (103), Expect(4) = 1e-36
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 17/81 (20%)
 Frame = -1

Query: 192 WRCLESRGLLVSYIRAIKDMYEGVKTRIRTVRGDSEHFPIVMGLHQGSTLSPL------- 34
           W  + S  +   Y+R  K +Y    + +R   G S  FP+ +G+HQGS+LSPL       
Sbjct: 310 WMSMRSHRVPEEYVRWTKLLYAKPTSVVRCAVGTSRPFPVRVGVHQGSSLSPLLFILCMD 369

Query: 33  ----------P*CMLFADDIV 1
                     P  +LFADD++
Sbjct: 370 TITKEIQKQHPWTLLFADDVM 390



 Score = 32.3 bits (72), Expect(4) = 1e-36
 Identities = 18/52 (34%), Positives = 26/52 (50%)
 Frame = -3

Query: 1063 WWWNGEVQEKVEAKKDAYAALVESVDE*EKRKNNERYKATKKKAKLAVITAK 908
            W+WN EVQ  +  KK  Y     +     + ++   Y A K++AK AV  AK
Sbjct: 32   WFWNEEVQAAIREKKSKYKLWWRT----RQPEDRGAYLAAKREAKKAVSKAK 79