BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028787
         (682 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595...    78   3e-18
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    65   1e-12
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A...    59   3e-07
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    58   2e-06
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A...    58   2e-06
gb|ABI34321.1| RNase H family protein [Solanum demissum]               50   3e-06

>ref|XP_006357717.1| PREDICTED: uncharacterized protein LOC102595469 [Solanum tuberosum]
          Length = 1079

 Score = 77.8 bits (190), Expect(2) = 3e-18
 Identities = 34/88 (38%), Positives = 51/88 (57%)
 Frame = +2

Query: 296  PWNIIQITNWIQRLMNTHQIQTRHCLREANQIADKLAQLSHNHIDQMTYNEFQQLPKIIK 475
            PW I++  N ++  M T      HC REANQ AD LA  S +    + Y  F++LP  +K
Sbjct: 992  PWRILEEVNELKNHMETTGFILNHCYREANQAADALASTSFSSPGNILYEYFEELPAKVK 1051

Query: 476  GIFNLDRWGLPTIRSRSQNSSNFIFDPP 559
            G+  +DRWG+ + R+R +   + I+DPP
Sbjct: 1052 GLMTMDRWGVTSFRTRQKKKQDLIWDPP 1079



 Score = 40.4 bits (93), Expect(2) = 3e-18
 Identities = 22/73 (30%), Positives = 35/73 (47%)
 Frame = +3

Query: 33   VKWHFPPPNFIKLNXXXXXXXXXXXXXEVI*TNEDRFI*D*NINLGKSTSNWVEARTLQE 212
            VKW  P  +F+K+N              VI  +    +   ++NLG+ TSNW EA+ L  
Sbjct: 900  VKWLKPSISFVKINSDGSCKDGYCGGGGVIRDHSGSLVFAYSLNLGQGTSNWAEAKALLY 959

Query: 213  EIERCINNDFHHI 251
             ++ CI++    I
Sbjct: 960  GVQWCISSGHEFI 972


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 65.5 bits (158), Expect(2) = 1e-12
 Identities = 31/74 (41%), Positives = 42/74 (56%)
 Frame = +2

Query: 296  PWNIIQITNWIQRLMNTHQIQTRHCLREANQIADKLAQLSHNHIDQMTYNEFQQLPKIIK 475
            PW +      IQ+++  H     HCLREANQ ADKLA +S +      +  +  LP ++K
Sbjct: 1082 PWRMYIPVKKIQKMVEEHGFIINHCLREANQPADKLASISLSTDVNHVFKSYANLPSLVK 1141

Query: 476  GIFNLDRWGLPTIR 517
            G+ NLDR  LPT R
Sbjct: 1142 GLVNLDRMNLPTFR 1155



 Score = 33.5 bits (75), Expect(2) = 1e-12
 Identities = 22/82 (26%), Positives = 35/82 (42%)
 Frame = +3

Query: 6    MEHRRSIKIVKWHFPPPNFIKLNXXXXXXXXXXXXXEVI*TNEDRFI*D*NINLGKSTSN 185
            + H+  I+ V W  PP  F KLN              ++     + I    I LG+ TS+
Sbjct: 982  INHKNVIR-VNWIKPPTMFAKLNTDGSCVNGRCGGGGILRNALGQVIMAFTIKLGEGTSS 1040

Query: 186  WVEARTLQEEIERCINNDFHHI 251
            W EA ++   ++ CI    + I
Sbjct: 1041 WAEAMSMLHGMQLCIQRGVNMI 1062


>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 198

 Score = 58.5 bits (140), Expect(2) = 3e-07
 Identities = 26/81 (32%), Positives = 53/81 (65%)
 Frame = +2

Query: 287 FKAPWNIIQITNWIQRLMNTHQIQTRHCLREANQIADKLAQLSHNHIDQMTYNEFQQLPK 466
           +K  W I +  + +++ M   +++T+H  RE N++AD LA L+ N  ++ T++ FQQLP 
Sbjct: 108 WKVLWVIAEEFDELKQEMTKIEVKTQHIYREGNKLADYLANLAINSTEKKTFSSFQQLPS 167

Query: 467 IIKGIFNLDRWGLPTIRSRSQ 529
           + + I N+++  +P++R R++
Sbjct: 168 LGRKIINMEKAQIPSLRCRTK 188



 Score = 22.7 bits (47), Expect(2) = 3e-07
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 162 NLGKSTSNWVEARTLQEEIERCINNDFHHI 251
           N+G +T+   E R + E I  C+N     I
Sbjct: 62  NIGITTNVEAEMRAILEAIRYCVNKKMRKI 91


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/81 (37%), Positives = 46/81 (56%)
 Frame = +2

Query: 287 FKAPWNIIQITNWIQRLMNTHQIQTRHCLREANQIADKLAQLSHNHIDQMTYNEFQQLPK 466
           ++ PW+I+ I   I  L     +Q +H  RE N +AD LA L+  + + + YN F +LP 
Sbjct: 248 WEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLANLAFFNPNIIVYNSFAELPS 307

Query: 467 IIKGIFNLDRWGLPTIRSRSQ 529
             K I NLD+  LP I+ R++
Sbjct: 308 QAKKIVNLDKQQLPNIKIRTR 328


>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 213

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
 Frame = +2

Query: 284 KFKAPWNIIQITNWIQRL----MNTHQIQTRHCLREANQIADKLAQLSHNHIDQMTYNEF 451
           K   PWN+   TN ++RL    + T   +  H  REAN +AD L++ SHN+     Y   
Sbjct: 124 KIAPPWNL---TNQLERLQQIIIQTQNFRCSHIFREANWVADALSKHSHNNTAPQVYVHS 180

Query: 452 QQLPKIIKGIFNLDRWGLPTIRSRSQNSSNFIFDPP 559
            QLPK     + +D   +P+ R   +  +  IFDPP
Sbjct: 181 NQLPKEAHAYYQMDLMDMPSFR---RKKTKMIFDPP 213


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 50.4 bits (119), Expect(2) = 3e-06
 Identities = 23/63 (36%), Positives = 39/63 (61%)
 Frame = +2

Query: 356  QTRHCLREANQIADKLAQLSHNHIDQMTYNEFQQLPKIIKGIFNLDRWGLPTIRSRSQNS 535
            +  HC REANQ+AD LA+ +    +   Y++++ +PK+  G + LD+  +P+IR R   S
Sbjct: 857  EVNHCYREANQVADALAKHAVISNEAHMYHDWRDIPKLAVGSYQLDKMQMPSIRIRYDKS 916

Query: 536  SNF 544
            + F
Sbjct: 917  NFF 919



 Score = 27.3 bits (59), Expect(2) = 3e-06
 Identities = 19/74 (25%), Positives = 31/74 (41%)
 Frame = +3

Query: 27  KIVKWHFPPPNFIKLNXXXXXXXXXXXXXEVI*TNEDRFI*D*NINLGKSTSNWVEARTL 206
           KIV W+ P  N +K+N              ++  +  R I   +I    S++N  EA   
Sbjct: 743 KIVHWNTPNINCVKINTDGSFSSGNAGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALAA 802

Query: 207 QEEIERCINNDFHH 248
           +  I  C+   FH+
Sbjct: 803 RFGILWCLQQGFHN 816