BLASTX nr result
ID: Atropa21_contig00028372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028372
(564 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356802.1| PREDICTED: KH domain-containing protein At4g... 122 6e-26
ref|XP_004238048.1| PREDICTED: KH domain-containing protein At4g... 120 2e-25
emb|CBI19333.3| unnamed protein product [Vitis vinifera] 100 2e-19
ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g... 100 2e-19
gb|EXC01140.1| KH domain-containing protein [Morus notabilis] 99 7e-19
gb|EOY15601.1| RNA-binding KH domain-containing protein, putativ... 99 7e-19
ref|XP_002302373.1| hypothetical protein POPTR_0002s11290g [Popu... 98 1e-18
ref|XP_006472368.1| PREDICTED: KH domain-containing protein At4g... 97 2e-18
ref|XP_006433702.1| hypothetical protein CICLE_v10000476mg [Citr... 97 2e-18
ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus ... 96 5e-18
ref|XP_004501077.1| PREDICTED: KH domain-containing protein At4g... 95 1e-17
gb|EMJ26871.1| hypothetical protein PRUPE_ppa002274mg [Prunus pe... 92 7e-17
ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g... 92 7e-17
ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g... 91 2e-16
ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatul... 90 4e-16
gb|ESW09268.1| hypothetical protein PHAVU_009G113700g [Phaseolus... 89 7e-16
gb|AFK42809.1| unknown [Lotus japonicus] 87 4e-15
ref|XP_004299847.1| PREDICTED: KH domain-containing protein At4g... 86 6e-15
ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g... 86 6e-15
gb|ADE75808.1| unknown [Picea sitchensis] 81 2e-13
>ref|XP_006356802.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
tuberosum]
Length = 675
Score = 122 bits (306), Expect = 6e-26
Identities = 60/62 (96%), Positives = 61/62 (98%)
Frame = -2
Query: 515 AIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETE 336
AIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSL+QAFVMVETE
Sbjct: 614 AIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLIQAFVMVETE 673
Query: 335 AA 330
A
Sbjct: 674 GA 675
>ref|XP_004238048.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 671
Score = 120 bits (302), Expect = 2e-25
Identities = 59/62 (95%), Positives = 61/62 (98%)
Frame = -2
Query: 515 AIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETE 336
AIYGEGGGCLRQICEISDAKVTINDPKPGATE+VIIISGTPEQTNAAQSL+QAFVMVETE
Sbjct: 610 AIYGEGGGCLRQICEISDAKVTINDPKPGATESVIIISGTPEQTNAAQSLIQAFVMVETE 669
Query: 335 AA 330
A
Sbjct: 670 GA 671
>emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 100 bits (249), Expect = 2e-19
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = -2
Query: 515 AIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETE 336
+IYGE GGCLRQI +ISDAK+TI +PKPGA+ETVIIISGTPEQT+AAQSL+QAFV+ ETE
Sbjct: 611 SIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETE 670
Query: 335 A 333
+
Sbjct: 671 S 671
>ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 100 bits (249), Expect = 2e-19
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = -2
Query: 515 AIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETE 336
+IYGE GGCLRQI +ISDAK+TI +PKPGA+ETVIIISGTPEQT+AAQSL+QAFV+ ETE
Sbjct: 640 SIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIISGTPEQTHAAQSLIQAFVLSETE 699
Query: 335 A 333
+
Sbjct: 700 S 700
>gb|EXC01140.1| KH domain-containing protein [Morus notabilis]
Length = 675
Score = 99.0 bits (245), Expect = 7e-19
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = -2
Query: 515 AIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETE 336
AIYGE G CL+QI +ISDAK+TI +PKPGA ETVIII+GTPEQTNAAQSL+QAFVM ETE
Sbjct: 614 AIYGEDGECLKQIRQISDAKITITEPKPGAVETVIIIAGTPEQTNAAQSLIQAFVMSETE 673
Query: 335 A 333
+
Sbjct: 674 S 674
>gb|EOY15601.1| RNA-binding KH domain-containing protein, putative isoform 1
[Theobroma cacao] gi|508723705|gb|EOY15602.1|
RNA-binding KH domain-containing protein, putative
isoform 1 [Theobroma cacao]
Length = 674
Score = 99.0 bits (245), Expect = 7e-19
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
IYGE G CL+QI +ISDAK+TI DPKP ATETVIIISGTPEQT+AAQSL+QAFVM ETE+
Sbjct: 614 IYGEDGACLKQIRQISDAKITITDPKPAATETVIIISGTPEQTHAAQSLIQAFVMSETES 673
Query: 332 A 330
+
Sbjct: 674 S 674
>ref|XP_002302373.1| hypothetical protein POPTR_0002s11290g [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| hypothetical protein
POPTR_0002s11290g [Populus trichocarpa]
Length = 680
Score = 98.2 bits (243), Expect = 1e-18
Identities = 47/61 (77%), Positives = 56/61 (91%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
IYGE G CL+QI +ISDAK+TIN+PKPGA+ETVIIISGTPEQT+AAQSL+QAFVM E E+
Sbjct: 620 IYGEDGACLKQIRQISDAKITINEPKPGASETVIIISGTPEQTHAAQSLIQAFVMSERES 679
Query: 332 A 330
+
Sbjct: 680 S 680
>ref|XP_006472368.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Citrus sinensis] gi|568836690|ref|XP_006472369.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Citrus sinensis]
gi|568836692|ref|XP_006472370.1| PREDICTED: KH
domain-containing protein At4g18375-like isoform X3
[Citrus sinensis]
Length = 696
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETE 336
I GE G CL+QI +ISDAK+TI DPKPGATETVIIISGTPEQT+AAQSL+QAFVM ETE
Sbjct: 636 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 694
>ref|XP_006433702.1| hypothetical protein CICLE_v10000476mg [Citrus clementina]
gi|567882289|ref|XP_006433703.1| hypothetical protein
CICLE_v10000476mg [Citrus clementina]
gi|567882291|ref|XP_006433704.1| hypothetical protein
CICLE_v10000476mg [Citrus clementina]
gi|567882293|ref|XP_006433705.1| hypothetical protein
CICLE_v10000476mg [Citrus clementina]
gi|557535824|gb|ESR46942.1| hypothetical protein
CICLE_v10000476mg [Citrus clementina]
gi|557535825|gb|ESR46943.1| hypothetical protein
CICLE_v10000476mg [Citrus clementina]
gi|557535826|gb|ESR46944.1| hypothetical protein
CICLE_v10000476mg [Citrus clementina]
gi|557535827|gb|ESR46945.1| hypothetical protein
CICLE_v10000476mg [Citrus clementina]
Length = 693
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETE 336
I GE G CL+QI +ISDAK+TI DPKPGATETVIIISGTPEQT+AAQSL+QAFVM ETE
Sbjct: 633 IQGEDGACLKQIRQISDAKITITDPKPGATETVIIISGTPEQTHAAQSLIQAFVMSETE 691
>ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 679
Score = 96.3 bits (238), Expect = 5e-18
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
IYGE G CL+QI +ISDAK+T+ +PKPGA ETVIIISGTPEQT+AAQSL+QAFVM E E+
Sbjct: 619 IYGEDGACLKQIRQISDAKITVTEPKPGAAETVIIISGTPEQTHAAQSLIQAFVMSERES 678
Query: 332 A 330
A
Sbjct: 679 A 679
>ref|XP_004501077.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Cicer arietinum] gi|502131718|ref|XP_004501078.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Cicer arietinum]
gi|502131720|ref|XP_004501079.1| PREDICTED: KH
domain-containing protein At4g18375-like isoform X3
[Cicer arietinum]
Length = 668
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
IYGE G CL+QI +ISDA VTI DPKPGA ET IIISGTPEQTNAAQSL+QAFVM E E+
Sbjct: 608 IYGEDGECLKQILQISDANVTITDPKPGAVETKIIISGTPEQTNAAQSLIQAFVMSERES 667
>gb|EMJ26871.1| hypothetical protein PRUPE_ppa002274mg [Prunus persica]
Length = 693
Score = 92.4 bits (228), Expect = 7e-17
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
I GE G CL+QI +ISDAKVTI +PKPGA ETVIIISGTPEQT+AAQSL+QAFVM ET++
Sbjct: 633 INGEDGECLKQIRQISDAKVTITEPKPGALETVIIISGTPEQTHAAQSLIQAFVMSETDS 692
Query: 332 A 330
+
Sbjct: 693 S 693
>ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Glycine max]
Length = 678
Score = 92.4 bits (228), Expect = 7e-17
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
IYGE G CL+QI +ISDA +TI DPKPGA ET IIISGTPEQT+AAQSL+QAFVM E E+
Sbjct: 618 IYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSERES 677
>ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Glycine max] gi|571459642|ref|XP_006581471.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Glycine max]
Length = 676
Score = 90.9 bits (224), Expect = 2e-16
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
IYGE G CL+QI +ISDA +TI DPKPG ET IIISGTPEQT+AAQSL+QAFVM E E+
Sbjct: 616 IYGEDGECLKQILQISDANITITDPKPGTVETKIIISGTPEQTHAAQSLIQAFVMSERES 675
>ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein
[Medicago truncatula]
Length = 662
Score = 89.7 bits (221), Expect = 4e-16
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
IYGE G CL+QI +ISDA V I DP PGA ET IIISGTPEQTNAAQSL+QAFVM E E+
Sbjct: 602 IYGENGECLKQILQISDANVIITDPIPGAVETKIIISGTPEQTNAAQSLIQAFVMSERES 661
>gb|ESW09268.1| hypothetical protein PHAVU_009G113700g [Phaseolus vulgaris]
Length = 673
Score = 89.0 bits (219), Expect = 7e-16
Identities = 44/60 (73%), Positives = 50/60 (83%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
I GE G CL+QI +ISDA +TI DPKPGA ET IIISGTPEQT+AAQSL+QAFVM E E+
Sbjct: 613 ICGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVMSERES 672
>gb|AFK42809.1| unknown [Lotus japonicus]
Length = 134
Score = 86.7 bits (213), Expect = 4e-15
Identities = 42/60 (70%), Positives = 48/60 (80%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
IYGE G CLRQI +I DAK+ I DPKPGA ET IIISGTPEQT+ AQS +QAFVM E ++
Sbjct: 74 IYGEDGECLRQILQIFDAKIMITDPKPGAVETKIIISGTPEQTHTAQSFIQAFVMSERDS 133
>ref|XP_004299847.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
vesca subsp. vesca]
Length = 633
Score = 85.9 bits (211), Expect = 6e-15
Identities = 42/61 (68%), Positives = 52/61 (85%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
I GE G CL+QI +ISDAK+TI +P P A ET+IIISGTPEQT+AAQSL+QAFVM ET++
Sbjct: 573 INGEDGECLKQIRQISDAKITITEPLPAAKETLIIISGTPEQTHAAQSLIQAFVMSETDS 632
Query: 332 A 330
+
Sbjct: 633 S 633
>ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus] gi|449522219|ref|XP_004168125.1| PREDICTED: KH
domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 85.9 bits (211), Expect = 6e-15
Identities = 42/61 (68%), Positives = 52/61 (85%)
Frame = -2
Query: 512 IYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVMVETEA 333
I GE G CL+QI +ISDAK+TI +PK G ET+IIISGTPEQT+AAQSL+QAFV+ ETE+
Sbjct: 633 ICGENGECLKQIRQISDAKITITEPKQGDVETMIIISGTPEQTHAAQSLIQAFVISETES 692
Query: 332 A 330
+
Sbjct: 693 S 693
>gb|ADE75808.1| unknown [Picea sitchensis]
Length = 131
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/56 (69%), Positives = 48/56 (85%)
Frame = -2
Query: 515 AIYGEGGGCLRQICEISDAKVTINDPKPGATETVIIISGTPEQTNAAQSLLQAFVM 348
+IYGE G L QI +IS AKV I+DP+PGATE +++ISGTPEQT+AAQSLLQAF+M
Sbjct: 70 SIYGENGNNLTQIRQISGAKVIIHDPRPGATEGLVVISGTPEQTHAAQSLLQAFIM 125