BLASTX nr result
ID: Atropa21_contig00028342
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028342
(657 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFS89534.1| putative RF2 protein, partial (chloroplast) [Frag... 56 8e-06
ref|YP_006883306.1| hypothetical chloroplast RF2 (chloroplast) [... 56 8e-06
gb|AFQ39524.1| putative chloroplast RF2 [Fragaria moupinensis] 56 8e-06
gb|AFQ39515.1| putative chloroplast RF2 [Fragaria chinensis] 56 8e-06
gb|AFQ39506.1| putative chloroplast RF2 [Fragaria nilgerrensis] 56 8e-06
gb|AFQ39497.1| putative chloroplast RF2 [Fragaria viridis] 56 8e-06
gb|AFQ39488.1| putative chloroplast RF2 [Fragaria orientalis] 56 8e-06
gb|AFQ39470.1| putative chloroplast RF2 [Fragaria virginiana] 56 8e-06
gb|AFQ39461.1| putative chloroplast RF2 [Fragaria x ananassa sub... 56 8e-06
ref|YP_004286145.1| hypothetical chloroplast RF2 [Fragaria vesca... 56 8e-06
gb|ABG76913.1| putative RF2 [Fragaria x ananassa] 56 8e-06
>gb|AFS89534.1| putative RF2 protein, partial (chloroplast) [Fragaria chiloensis]
Length = 1209
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 202 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 233
>ref|YP_006883306.1| hypothetical chloroplast RF2 (chloroplast) [Fragaria vesca subsp.
bracteata] gi|408830362|ref|YP_006883379.1| hypothetical
chloroplast RF2 [Fragaria mandshurica]
gi|428697243|ref|YP_007025426.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria chiloensis]
gi|428697261|ref|YP_007025444.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria chiloensis]
gi|428697329|ref|YP_007025511.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria virginiana]
gi|428697347|ref|YP_007025529.1| hypothetical chloroplast
RF2 (chloroplast) [Fragaria virginiana]
gi|357198782|gb|AET62698.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria chiloensis]
gi|357198800|gb|AET62716.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria chiloensis]
gi|357198868|gb|AET62783.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria virginiana]
gi|357198886|gb|AET62801.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria virginiana]
gi|378554750|gb|AFC17685.1| hypothetical chloroplast RF2
(chloroplast) [Fragaria vesca subsp. bracteata]
gi|378554824|gb|AFC17758.1| hypothetical chloroplast RF2
[Fragaria mandshurica]
Length = 2275
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1268 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1299
>gb|AFQ39524.1| putative chloroplast RF2 [Fragaria moupinensis]
Length = 2273
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1266 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1297
>gb|AFQ39515.1| putative chloroplast RF2 [Fragaria chinensis]
Length = 2273
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1266 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1297
>gb|AFQ39506.1| putative chloroplast RF2 [Fragaria nilgerrensis]
Length = 2273
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1266 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1297
>gb|AFQ39497.1| putative chloroplast RF2 [Fragaria viridis]
Length = 2273
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1266 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1297
>gb|AFQ39488.1| putative chloroplast RF2 [Fragaria orientalis]
Length = 2273
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1266 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1297
>gb|AFQ39470.1| putative chloroplast RF2 [Fragaria virginiana]
Length = 2273
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1266 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1297
>gb|AFQ39461.1| putative chloroplast RF2 [Fragaria x ananassa subsp. cuneifolia]
gi|402239285|gb|AFQ39533.1| putative chloroplast RF2
[Fragaria tibetica]
Length = 2273
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1266 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1297
>ref|YP_004286145.1| hypothetical chloroplast RF2 [Fragaria vesca subsp. vesca]
gi|325126927|ref|YP_004286163.1| hypothetical chloroplast
RF2 [Fragaria vesca subsp. vesca]
gi|324022820|gb|ADY15394.1| hypothetical chloroplast RF2
[Fragaria vesca subsp. vesca] gi|324022839|gb|ADY15413.1|
hypothetical chloroplast RF2 [Fragaria vesca subsp.
vesca] gi|402239225|gb|AFQ39479.1| putative chloroplast
RF2 [Fragaria bucharica] gi|402239295|gb|AFQ39542.1|
putative chloroplast RF2 [Fragaria corymbosa]
gi|402239305|gb|AFQ39551.1| putative chloroplast RF2
[Fragaria gracilis]
Length = 2273
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1266 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1297
>gb|ABG76913.1| putative RF2 [Fragaria x ananassa]
Length = 2275
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -2
Query: 449 FLSIFHDIIHNSGVSCRICQKRLCLSQWNLIS 354
FLSIFHDI+H SG+S RI QK+LCL QWN+IS
Sbjct: 1268 FLSIFHDIMHGSGISWRILQKKLCLPQWNMIS 1299