BLASTX nr result
ID: Atropa21_contig00028266
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028266
(538 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotei... 315 1e-88
gb|EMJ09609.1| hypothetical protein PRUPE_ppa000042mg [Prunus pe... 313 5e-88
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420... 314 5e-88
gb|EXB36921.1| U5 small nuclear ribonucleoprotein 200 kDa helica... 312 1e-87
ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotei... 311 1e-87
ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotei... 311 2e-87
gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, puta... 311 4e-87
gb|EOY19725.1| U5 small nuclear ribonucleoprotein helicase, puta... 311 4e-87
ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotei... 310 6e-87
ref|XP_004300244.1| PREDICTED: U5 small nuclear ribonucleoprotei... 307 3e-86
gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus... 306 5e-86
ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa h... 303 5e-85
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ... 301 3e-84
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei... 299 2e-83
ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuc... 297 8e-83
ref|XP_004304804.1| PREDICTED: U5 small nuclear ribonucleoprotei... 296 1e-82
ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata] g... 291 6e-81
ref|XP_006306573.1| hypothetical protein CARUB_v10008066mg [Caps... 290 7e-81
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei... 304 7e-81
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera] 304 7e-81
>ref|XP_006350847.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum tuberosum]
Length = 2174
Score = 315 bits (808), Expect(2) = 1e-88
Identities = 146/160 (91%), Positives = 154/160 (96%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITRS+L+VELTITPDFQWEDKVHGYVEPFWIIVEDNDG +ILH
Sbjct: 1205 KFIHQFPKLNLAAHVQPITRSVLRVELTITPDFQWEDKVHGYVEPFWIIVEDNDGEFILH 1264
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYFMLKKQYIDED+TLNFTVPIYEPLPPQYFI VVSD+WLGSQTVLP+SFRHLILPEK+
Sbjct: 1265 HEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKY 1324
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN AYEALY+DFKHFNPVQTQ F
Sbjct: 1325 PPPTELLDLQPLPVTALRNPAYEALYQDFKHFNPVQTQVF 1364
Score = 37.4 bits (85), Expect(2) = 1e-88
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYNSD N LVAAPTGSGK
Sbjct: 1364 FTVLYNSDDNVLVAAPTGSGK 1384
>gb|EMJ09609.1| hypothetical protein PRUPE_ppa000042mg [Prunus persica]
Length = 2180
Score = 313 bits (802), Expect(2) = 5e-88
Identities = 143/160 (89%), Positives = 153/160 (95%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITR++L+VELTITPDFQWEDKVHGYVEPFW+IVEDNDG Y+LH
Sbjct: 1207 KFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLH 1266
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYF+LKKQYIDED+TLNFTVPIYEPLPPQYFI VVSDRWLGSQTVLP+SFRHLILPEK+
Sbjct: 1267 HEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKY 1326
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN YEALY+DFKHFNPVQTQ F
Sbjct: 1327 PPPTELLDLQPLPVTALRNPLYEALYQDFKHFNPVQTQVF 1366
Score = 37.4 bits (85), Expect(2) = 5e-88
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYNSD N LVAAPTGSGK
Sbjct: 1366 FTVLYNSDDNVLVAAPTGSGK 1386
>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
putative [Ricinus communis]
Length = 1809
Score = 314 bits (805), Expect(2) = 5e-88
Identities = 144/160 (90%), Positives = 154/160 (96%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITR++L+VELTITPDFQWEDKVHGYVEPFW+IVEDNDG YILH
Sbjct: 840 KFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILH 899
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYFMLKKQYIDED+TLNFTVPIYEPLPPQYFI VVSD+WLGSQTVLP+SFRHLILPEK+
Sbjct: 900 HEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKY 959
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN +YEALY+DFKHFNPVQTQ F
Sbjct: 960 PPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 999
Score = 36.2 bits (82), Expect(2) = 5e-88
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYN+D N LVAAPTGSGK
Sbjct: 999 FTVLYNTDDNVLVAAPTGSGK 1019
>gb|EXB36921.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Morus notabilis]
Length = 2183
Score = 312 bits (799), Expect(2) = 1e-87
Identities = 143/160 (89%), Positives = 154/160 (96%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK +LA HVQPITR++L+VELTITPDFQWEDKVHGYVEPFW+IVEDNDG YILH
Sbjct: 1213 KFIHQFPKLDLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILH 1272
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYFMLKKQYIDED+TLNFTVPIYEPLPPQYFI VVSDRWLGSQTVLP+SFRHLILPEK+
Sbjct: 1273 HEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKY 1332
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPV+ALRNS+YE LY+DFKHFNPVQTQ F
Sbjct: 1333 PPPTELLDLQPLPVSALRNSSYEDLYKDFKHFNPVQTQVF 1372
Score = 37.4 bits (85), Expect(2) = 1e-87
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYNSD N LVAAPTGSGK
Sbjct: 1372 FTVLYNSDDNVLVAAPTGSGK 1392
>ref|XP_003531516.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Glycine max]
Length = 2183
Score = 311 bits (798), Expect(2) = 1e-87
Identities = 141/160 (88%), Positives = 154/160 (96%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITR++L+VELTITPDF W+D++HGYVEPFW+IVEDNDG YILH
Sbjct: 1212 KFIHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILH 1271
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYFMLKKQYIDED+TLNFTVPIYEPLPPQYFI VVSDRWLGSQTVLP+SFRHLILPEK+
Sbjct: 1272 HEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKY 1331
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRNS+YE+LY+DFKHFNPVQTQ F
Sbjct: 1332 PPPTELLDLQPLPVTALRNSSYESLYKDFKHFNPVQTQVF 1371
Score = 37.4 bits (85), Expect(2) = 1e-87
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYNSD N LVAAPTGSGK
Sbjct: 1371 FTVLYNSDDNVLVAAPTGSGK 1391
>ref|XP_004242515.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Solanum lycopersicum]
Length = 2174
Score = 311 bits (797), Expect(2) = 2e-87
Identities = 145/160 (90%), Positives = 152/160 (95%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITRS+L+VELTITPDFQWEDKVHGYVE FWIIVEDNDG YILH
Sbjct: 1205 KFIHQFPKLNLAAHVQPITRSVLRVELTITPDFQWEDKVHGYVESFWIIVEDNDGEYILH 1264
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYFMLKKQYIDED+TLNFTVPIYEPLPPQYFI VVSD+WLGS TVLP+SFRHLILPEK+
Sbjct: 1265 HEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSLTVLPVSFRHLILPEKY 1324
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN AYEALY+DFKHFNPVQTQ F
Sbjct: 1325 PPPTELLDLQPLPVTALRNPAYEALYQDFKHFNPVQTQVF 1364
Score = 37.4 bits (85), Expect(2) = 2e-87
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYNSD N LVAAPTGSGK
Sbjct: 1364 FTVLYNSDDNVLVAAPTGSGK 1384
>gb|EOY19724.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
[Theobroma cacao]
Length = 2176
Score = 311 bits (797), Expect(2) = 4e-87
Identities = 140/160 (87%), Positives = 154/160 (96%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
+FIHQFPK NLA HVQPITR++L+VELTITPDFQWEDKVHGYVEPFW+IVEDNDG Y+LH
Sbjct: 1204 RFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLH 1263
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYF+LKKQYIDED+TLNFTVPIYEPLPPQYFI VVSD+WLGSQT+LP+SFRHLILPEK+
Sbjct: 1264 HEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKY 1323
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN +YEALY+DFKHFNPVQTQ F
Sbjct: 1324 PPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1363
Score = 36.2 bits (82), Expect(2) = 4e-87
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYN+D N LVAAPTGSGK
Sbjct: 1363 FTVLYNTDDNVLVAAPTGSGK 1383
>gb|EOY19725.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
[Theobroma cacao]
Length = 2062
Score = 311 bits (797), Expect(2) = 4e-87
Identities = 140/160 (87%), Positives = 154/160 (96%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
+FIHQFPK NLA HVQPITR++L+VELTITPDFQWEDKVHGYVEPFW+IVEDNDG Y+LH
Sbjct: 1090 RFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLH 1149
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYF+LKKQYIDED+TLNFTVPIYEPLPPQYFI VVSD+WLGSQT+LP+SFRHLILPEK+
Sbjct: 1150 HEYFLLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKY 1209
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN +YEALY+DFKHFNPVQTQ F
Sbjct: 1210 PPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1249
Score = 36.2 bits (82), Expect(2) = 4e-87
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYN+D N LVAAPTGSGK
Sbjct: 1249 FTVLYNTDDNVLVAAPTGSGK 1269
>ref|XP_006598183.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
isoform X1 [Glycine max]
Length = 2183
Score = 310 bits (793), Expect(2) = 6e-87
Identities = 140/160 (87%), Positives = 153/160 (95%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITR++L+VELTITPDF W+D++HGYVEPFW+IVEDNDG YILH
Sbjct: 1212 KFIHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILH 1271
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYFMLKKQYIDED+TLNFTVPIYEPLPPQYFI VVSDRWLGSQTVLP+SFRHLILPEK+
Sbjct: 1272 HEYFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKY 1331
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN +YE+LY+DFKHFNPVQTQ F
Sbjct: 1332 PPPTELLDLQPLPVTALRNPSYESLYKDFKHFNPVQTQVF 1371
Score = 37.4 bits (85), Expect(2) = 6e-87
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYNSD N LVAAPTGSGK
Sbjct: 1371 FTVLYNSDDNVLVAAPTGSGK 1391
>ref|XP_004300244.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Fragaria vesca subsp. vesca]
Length = 2173
Score = 307 bits (787), Expect(2) = 3e-86
Identities = 144/160 (90%), Positives = 152/160 (95%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITR++L+VELTITPDFQWEDKVHGYVEPFW+IVEDNDG YILH
Sbjct: 1210 KFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILH 1269
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYF+LKKQYIDED+TLNFTV IYEPLPPQYFI VVSDRWLGSQTVLP+SFRHLILPEK+
Sbjct: 1270 HEYFLLKKQYIDEDHTLNFTVQIYEPLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKY 1329
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRNS YEALY DFKHFNPVQTQ F
Sbjct: 1330 PPPTELLDLQPLPVTALRNSMYEALY-DFKHFNPVQTQVF 1368
Score = 37.4 bits (85), Expect(2) = 3e-86
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYNSD N LVAAPTGSGK
Sbjct: 1368 FTVLYNSDDNVLVAAPTGSGK 1388
>gb|ESW21254.1| hypothetical protein PHAVU_005G055300g [Phaseolus vulgaris]
gi|561022525|gb|ESW21255.1| hypothetical protein
PHAVU_005G055300g [Phaseolus vulgaris]
Length = 2184
Score = 306 bits (785), Expect(2) = 5e-86
Identities = 138/160 (86%), Positives = 153/160 (95%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
+FIHQFPK NLA HVQPITR++L+VELTITPDF W+D++HGYVEPFW+IVEDNDG YILH
Sbjct: 1212 RFIHQFPKLNLAAHVQPITRTVLRVELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILH 1271
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HE+FMLKKQYIDED+TLNFTVPIYEPLPPQYFI VVSD+WLGSQTVLP+SFRHLILPEK+
Sbjct: 1272 HEFFMLKKQYIDEDHTLNFTVPIYEPLPPQYFIHVVSDKWLGSQTVLPVSFRHLILPEKY 1331
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN +YEALY+DFKHFNPVQTQ F
Sbjct: 1332 PPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1371
Score = 37.4 bits (85), Expect(2) = 5e-86
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYNSD N LVAAPTGSGK
Sbjct: 1371 FTVLYNSDDNVLVAAPTGSGK 1391
>ref|XP_003595992.1| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
truncatula] gi|355485040|gb|AES66243.1| U5 small nuclear
ribonucleoprotein 200 kDa helicase [Medicago truncatula]
Length = 2223
Score = 303 bits (776), Expect(2) = 5e-85
Identities = 137/160 (85%), Positives = 152/160 (95%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
+FIHQFPK NLA HVQPITR++L VELTITPDF W+D++HGYVEPFW+IVEDNDG YILH
Sbjct: 1257 RFIHQFPKLNLAAHVQPITRTVLGVELTITPDFAWDDRMHGYVEPFWVIVEDNDGEYILH 1316
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYF+LKKQYI+ED+TLNFTVPIYEPLPPQYFI VVSD+WLGSQTVLP+SFRHLILPEK+
Sbjct: 1317 HEYFLLKKQYIEEDHTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKY 1376
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN +YEALY+DFKHFNPVQTQ F
Sbjct: 1377 PPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1416
Score = 37.4 bits (85), Expect(2) = 5e-85
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYNSD N LVAAPTGSGK
Sbjct: 1416 FTVLYNSDDNVLVAAPTGSGK 1436
>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
gi|222869248|gb|EEF06379.1| U5 small nuclear
ribonucleoprotein helicase [Populus trichocarpa]
Length = 2157
Score = 301 bits (772), Expect(2) = 3e-84
Identities = 141/164 (85%), Positives = 151/164 (92%), Gaps = 4/164 (2%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITR++L+VELTIT DFQWED VHGYVEPFW+IVEDNDG YILH
Sbjct: 1180 KFIHQFPKLNLAAHVQPITRTVLRVELTITADFQWEDNVHGYVEPFWVIVEDNDGDYILH 1239
Query: 358 HEYFMLKKQYIDE----DYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLIL 191
HEYFMLKKQY+DE D TLNFTVPIYEPLPPQYFI VVSD+WLGSQTVLP+SFRHLIL
Sbjct: 1240 HEYFMLKKQYVDEHQVVDLTLNFTVPIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLIL 1299
Query: 190 PEKHPPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PEK+PPPTELLDLQPLPVTALRN +YEALY+DFKHFNPVQTQ F
Sbjct: 1300 PEKYPPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1343
Score = 36.2 bits (82), Expect(2) = 3e-84
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYN+D N LVAAPTGSGK
Sbjct: 1343 FTVLYNTDDNVLVAAPTGSGK 1363
>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Cucumis sativus]
Length = 2175
Score = 299 bits (766), Expect(2) = 2e-83
Identities = 137/160 (85%), Positives = 150/160 (93%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITR++L+VELTITPDFQWEDKVHGYVE FW++VEDNDG +I H
Sbjct: 1205 KFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVESFWVLVEDNDGEFIHH 1264
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HE+F+LKKQYIDED+TLNFTVPI EPLPPQYFI VVSDRWLGSQT+LP+SFRHLILPEK
Sbjct: 1265 HEHFLLKKQYIDEDHTLNFTVPICEPLPPQYFIRVVSDRWLGSQTILPVSFRHLILPEKF 1324
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN +YEALY+DFKHFNPVQTQ F
Sbjct: 1325 PPPTELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1364
Score = 36.2 bits (82), Expect(2) = 2e-83
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYN+D N LVAAPTGSGK
Sbjct: 1364 FTVLYNTDDNVLVAAPTGSGK 1384
>ref|XP_004165711.1| PREDICTED: LOW QUALITY PROTEIN: U5 small nuclear ribonucleoprotein
200 kDa helicase-like [Cucumis sativus]
Length = 2175
Score = 297 bits (760), Expect(2) = 8e-83
Identities = 136/160 (85%), Positives = 149/160 (93%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITR++L+VELTITPDFQWEDKVHGYVE FW++VEDNDG +I H
Sbjct: 1205 KFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVESFWVLVEDNDGEFIHH 1264
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HE+F+LKKQYIDED+TLNFTVPI EPLPPQYFI VVSDRWLGSQT+LP+SFRHLILPEK
Sbjct: 1265 HEHFLLKKQYIDEDHTLNFTVPICEPLPPQYFIRVVSDRWLGSQTILPVSFRHLILPEKF 1324
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPP ELLDLQPLPVTALRN +YEALY+DFKHFNPVQTQ F
Sbjct: 1325 PPPMELLDLQPLPVTALRNPSYEALYQDFKHFNPVQTQVF 1364
Score = 36.2 bits (82), Expect(2) = 8e-83
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
FTVLYN+D N LVAAPTGSGK
Sbjct: 1364 FTVLYNTDDNVLVAAPTGSGK 1384
>ref|XP_004304804.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
[Fragaria vesca subsp. vesca]
Length = 2174
Score = 296 bits (757), Expect(2) = 1e-82
Identities = 136/160 (85%), Positives = 149/160 (93%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK NLA HVQPITR++L+VELTITPDFQWEDKVHGYVEPFW++VEDNDG +ILH
Sbjct: 1194 KFIHQFPKLNLAAHVQPITRTVLRVELTITPDFQWEDKVHGYVEPFWVLVEDNDGEHILH 1253
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYF+LKKQ IDED+TLNFTV IYEPLPP YFI VVSDRWLGSQTVLP+SFR+LILPEK+
Sbjct: 1254 HEYFLLKKQCIDEDHTLNFTVQIYEPLPPHYFIRVVSDRWLGSQTVLPVSFRYLILPEKY 1313
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN YE+LY+DFK FNPVQTQ F
Sbjct: 1314 PPPTELLDLQPLPVTALRNPLYESLYQDFKQFNPVQTQVF 1353
Score = 37.0 bits (84), Expect(2) = 1e-82
Identities = 19/21 (90%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNSD-NALVAAPTGSGK 1
F VLYNSD NALVAAPTGSGK
Sbjct: 1353 FNVLYNSDDNALVAAPTGSGK 1373
>ref|XP_002893142.1| EMB1507 [Arabidopsis lyrata subsp. lyrata]
gi|297338984|gb|EFH69401.1| EMB1507 [Arabidopsis lyrata
subsp. lyrata]
Length = 2171
Score = 291 bits (744), Expect(2) = 6e-81
Identities = 131/160 (81%), Positives = 148/160 (92%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK L+ HVQPITR++LKVELT+TPDF W++K+H YVEPFWIIVEDNDG ILH
Sbjct: 1200 KFIHQFPKLTLSAHVQPITRTVLKVELTVTPDFLWDEKIHKYVEPFWIIVEDNDGEKILH 1259
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYF+LK+QYIDED+TLNFTVPI+EPLPPQYF+ VVSD+WLGS+TVLP+SFRHLILPEK+
Sbjct: 1260 HEYFLLKQQYIDEDHTLNFTVPIFEPLPPQYFVRVVSDKWLGSETVLPVSFRHLILPEKY 1319
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN YE LY+DFKHFNPVQTQ F
Sbjct: 1320 PPPTELLDLQPLPVTALRNPNYEILYQDFKHFNPVQTQVF 1359
Score = 36.2 bits (82), Expect(2) = 6e-81
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNS-DNALVAAPTGSGK 1
FTVLYN+ DN LVAAPTGSGK
Sbjct: 1359 FTVLYNTNDNVLVAAPTGSGK 1379
>ref|XP_006306573.1| hypothetical protein CARUB_v10008066mg [Capsella rubella]
gi|482575284|gb|EOA39471.1| hypothetical protein
CARUB_v10008066mg [Capsella rubella]
Length = 2170
Score = 290 bits (743), Expect(2) = 7e-81
Identities = 132/160 (82%), Positives = 147/160 (91%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK L+ HVQPITR++LKVELT+TPDF W+DK+H YVEPFWIIVEDNDG ILH
Sbjct: 1200 KFIHQFPKLTLSAHVQPITRTVLKVELTVTPDFLWDDKIHKYVEPFWIIVEDNDGEKILH 1259
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYF+LKKQYI ED+TL+FTVPI+EPLPPQYF+ VVSD+WLGSQTVLP+SFRHLILPEK+
Sbjct: 1260 HEYFLLKKQYIHEDHTLSFTVPIFEPLPPQYFVRVVSDKWLGSQTVLPVSFRHLILPEKY 1319
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN YE LY+DFKHFNPVQTQ F
Sbjct: 1320 PPPTELLDLQPLPVTALRNPNYERLYQDFKHFNPVQTQVF 1359
Score = 36.2 bits (82), Expect(2) = 7e-81
Identities = 18/21 (85%), Positives = 19/21 (90%), Gaps = 1/21 (4%)
Frame = -2
Query: 60 FTVLYNS-DNALVAAPTGSGK 1
FTVLYN+ DN LVAAPTGSGK
Sbjct: 1359 FTVLYNTNDNVLVAAPTGSGK 1379
>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
vinifera]
Length = 2177
Score = 304 bits (779), Expect = 7e-81
Identities = 138/160 (86%), Positives = 153/160 (95%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK +LA HVQPITR++L+VELTITPDFQWEDKVHG+VEPFW+IVEDNDG YILH
Sbjct: 1207 KFIHQFPKLDLAAHVQPITRTVLRVELTITPDFQWEDKVHGFVEPFWVIVEDNDGEYILH 1266
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYFM+KKQYIDE +TLNFTVPIYEPLPPQYFI VVSDRWLGSQ+VLP+SFRHLILPEK+
Sbjct: 1267 HEYFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQSVLPVSFRHLILPEKY 1326
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN +YEALY++FKHFNP+QTQ F
Sbjct: 1327 PPPTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVF 1366
>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
Length = 2144
Score = 304 bits (779), Expect = 7e-81
Identities = 138/160 (86%), Positives = 153/160 (95%)
Frame = -1
Query: 538 KFIHQFPKFNLATHVQPITRSILKVELTITPDFQWEDKVHGYVEPFWIIVEDNDGVYILH 359
KFIHQFPK +LA HVQPITR++L+VELTITPDFQWEDKVHG+VEPFW+IVEDNDG YILH
Sbjct: 1174 KFIHQFPKLDLAAHVQPITRTVLRVELTITPDFQWEDKVHGFVEPFWVIVEDNDGEYILH 1233
Query: 358 HEYFMLKKQYIDEDYTLNFTVPIYEPLPPQYFICVVSDRWLGSQTVLPISFRHLILPEKH 179
HEYFM+KKQYIDE +TLNFTVPIYEPLPPQYFI VVSDRWLGSQ+VLP+SFRHLILPEK+
Sbjct: 1234 HEYFMMKKQYIDEVHTLNFTVPIYEPLPPQYFIRVVSDRWLGSQSVLPVSFRHLILPEKY 1293
Query: 178 PPPTELLDLQPLPVTALRNSAYEALYRDFKHFNPVQTQFF 59
PPPTELLDLQPLPVTALRN +YEALY++FKHFNP+QTQ F
Sbjct: 1294 PPPTELLDLQPLPVTALRNPSYEALYQEFKHFNPIQTQVF 1333