BLASTX nr result
ID: Atropa21_contig00028256
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028256
(1026 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356284.1| PREDICTED: zinc finger CCCH domain-containin... 533 e-149
ref|XP_004237735.1| PREDICTED: zinc finger CCCH domain-containin... 452 e-124
ref|XP_004237737.1| PREDICTED: zinc finger CCCH domain-containin... 346 1e-92
emb|CBI19970.3| unnamed protein product [Vitis vinifera] 189 2e-45
ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267... 189 2e-45
emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera] 189 2e-45
gb|EOX92488.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 109 2e-21
gb|EOX92487.1| Zinc finger C-x8-C-x5-C-x3-H type family protein,... 109 2e-21
gb|EMJ09602.1| hypothetical protein PRUPE_ppa001169mg [Prunus pe... 108 3e-21
ref|XP_002307020.2| hypothetical protein POPTR_0005s06240g [Popu... 103 1e-19
gb|EXB40990.1| Zinc finger CCCH domain-containing protein 38 [Mo... 102 2e-19
ref|XP_002527649.1| hypothetical protein RCOM_1278130 [Ricinus c... 100 1e-18
ref|XP_002310510.2| hypothetical protein POPTR_0007s03970g [Popu... 98 5e-18
ref|XP_003528041.1| PREDICTED: zinc finger CCCH domain-containin... 97 8e-18
gb|ESW09702.1| hypothetical protein PHAVU_009G149100g [Phaseolus... 97 1e-17
ref|NP_001060944.1| Os08g0135800 [Oryza sativa Japonica Group] g... 93 2e-16
gb|EAZ41439.1| hypothetical protein OsJ_25961 [Oryza sativa Japo... 93 2e-16
ref|XP_006578794.1| PREDICTED: zinc finger CCCH domain-containin... 92 4e-16
ref|XP_006578792.1| PREDICTED: zinc finger CCCH domain-containin... 92 4e-16
ref|XP_006659097.1| PREDICTED: zinc finger CCCH domain-containin... 91 6e-16
>ref|XP_006356284.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like isoform
X1 [Solanum tuberosum] gi|565379758|ref|XP_006356285.1|
PREDICTED: zinc finger CCCH domain-containing protein
55-like isoform X2 [Solanum tuberosum]
Length = 853
Score = 533 bits (1374), Expect = e-149
Identities = 253/303 (83%), Positives = 273/303 (90%), Gaps = 2/303 (0%)
Frame = -3
Query: 904 VQNRSRSPLHNSKRDPYASGDRGTGPRMS--VCRDFAAGNCRRGSDCRFFHPDAANHRDG 731
VQNRSRSP H+SKRDPYASGDR TG +S VCR+FAAGNCRRGSDCRF HPDAA+HRDG
Sbjct: 144 VQNRSRSPPHSSKRDPYASGDRRTGLHISSQVCRNFAAGNCRRGSDCRFVHPDAASHRDG 203
Query: 730 GHSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRD 551
GHSEDNL+ERLGSRPERGH+SRY D EGPGYQSRDRLPDMHHLEDELHRNRSRGTITCR+
Sbjct: 204 GHSEDNLSERLGSRPERGHVSRYNDSEGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRN 263
Query: 550 FVKGNCRWGASCRFSHDGASGDNYDKGTRSASFNHGQDNQASRTGVSLCKYFTATKCYKV 371
FVKGNCRWGASCRFSHDGASGD YDKGTRS SF+HGQDNQA+RTG SLC+YF A KCYK
Sbjct: 264 FVKGNCRWGASCRFSHDGASGDTYDKGTRSTSFDHGQDNQATRTGKSLCEYFAAGKCYKD 323
Query: 370 DCKFSHDDTSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSDLVKVSGWDENVVR 191
+CKFSHD TSRNHE RP DIGG RFDDKNN WL+GPKWD+E RPSDLVK SGWDE+VVR
Sbjct: 324 NCKFSHDATSRNHEIRPSDDIGGHRFDDKNN-WLDGPKWDNEARPSDLVKASGWDESVVR 382
Query: 190 KDTAVTVLPDRTNEKPGHSFENEKRAWGSTEPLFMSSDREIGVSPHRGSAGNLNSLNISE 11
KDTAVTVL DRT E+PGH+FENE RAWG TEP FM+SD E GVSPHRGSAG++N+LNISE
Sbjct: 383 KDTAVTVLTDRTTERPGHNFENENRAWG-TEPQFMNSDTERGVSPHRGSAGHVNALNISE 441
Query: 10 SSV 2
SSV
Sbjct: 442 SSV 444
>ref|XP_004237735.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Solanum lycopersicum]
Length = 837
Score = 452 bits (1163), Expect = e-124
Identities = 220/303 (72%), Positives = 248/303 (81%), Gaps = 2/303 (0%)
Frame = -3
Query: 904 VQNRSRSPLHNSKRDPYASGDRGTGPRM--SVCRDFAAGNCRRGSDCRFFHPDAANHRDG 731
VQNRSRSP HNSKRDPYAS DR TG M VCR+FA GNCRRGS C FFHPDAA HRDG
Sbjct: 131 VQNRSRSP-HNSKRDPYASADRRTGLHMYSKVCRNFAVGNCRRGSQCWFFHPDAAIHRDG 189
Query: 730 GHSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRD 551
G+ EDNL+ERLGSRPERGHISRY D EG GYQSRD+LP +H+LEDELHRN+SRG ITCR+
Sbjct: 190 GNLEDNLSERLGSRPERGHISRYNDSEGLGYQSRDKLPYLHNLEDELHRNQSRGRITCRN 249
Query: 550 FVKGNCRWGASCRFSHDGASGDNYDKGTRSASFNHGQDNQASRTGVSLCKYFTATKCYKV 371
FVKG+CRWGASCRFSHD SGDNY+KGT+S SFN+ Q NQA+RTG LC+YF A KCYK
Sbjct: 250 FVKGDCRWGASCRFSHDSPSGDNYEKGTQSESFNYVQGNQATRTGKLLCEYFAAGKCYKD 309
Query: 370 DCKFSHDDTSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSDLVKVSGWDENVVR 191
+CKFSHD TSRNHE RP D G RFD N WL+GPKWD+E RPS+LVK SGWDE+VVR
Sbjct: 310 NCKFSHDATSRNHEIRPSNDNSGHRFDG-TNIWLDGPKWDNETRPSELVKASGWDESVVR 368
Query: 190 KDTAVTVLPDRTNEKPGHSFENEKRAWGSTEPLFMSSDREIGVSPHRGSAGNLNSLNISE 11
DT++ VL D TNEKP H FEN+ +AW EP F++SD E GVSPHRGSA +LN+LNI+E
Sbjct: 369 TDTSIIVLTDGTNEKPDHHFENKNKAW-EIEPQFINSDTERGVSPHRGSASHLNALNITE 427
Query: 10 SSV 2
SSV
Sbjct: 428 SSV 430
>ref|XP_004237737.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
[Solanum lycopersicum]
Length = 600
Score = 346 bits (887), Expect = 1e-92
Identities = 165/204 (80%), Positives = 177/204 (86%), Gaps = 2/204 (0%)
Frame = -3
Query: 904 VQNRSRSPLHNSKRDPYASGDRGTGPRMS--VCRDFAAGNCRRGSDCRFFHPDAANHRDG 731
VQNRSRSP HN+KRDPYASGDR +S VCR+FAAGNCRRGSDCRF H D+A+HRD
Sbjct: 146 VQNRSRSP-HNTKRDPYASGDRRASLHISSQVCRNFAAGNCRRGSDCRFIHLDSASHRDE 204
Query: 730 GHSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRD 551
GHSEDNL+ERLGSRPERGHISRY D EGPGYQSRD LPDMHHLEDEL+RNRSRGTITCR+
Sbjct: 205 GHSEDNLSERLGSRPERGHISRYNDSEGPGYQSRDMLPDMHHLEDELNRNRSRGTITCRN 264
Query: 550 FVKGNCRWGASCRFSHDGASGDNYDKGTRSASFNHGQDNQASRTGVSLCKYFTATKCYKV 371
FVK NCRWGASCRFSHDGASGD YDKGTRS SF HGQDNQA+RTG SLC+YF A KCYK
Sbjct: 265 FVKSNCRWGASCRFSHDGASGDYYDKGTRSTSFEHGQDNQATRTGKSLCEYFAAGKCYKD 324
Query: 370 DCKFSHDDTSRNHESRPPGDIGGQ 299
+C+FSHD TSRNHE RP DIG Q
Sbjct: 325 NCEFSHDATSRNHEIRPLDDIGEQ 348
>emb|CBI19970.3| unnamed protein product [Vitis vinifera]
Length = 994
Score = 189 bits (480), Expect = 2e-45
Identities = 118/307 (38%), Positives = 153/307 (49%), Gaps = 13/307 (4%)
Frame = -3
Query: 892 SRSPLHNSKRDPYASGDR---GTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGGHS 722
SRSP + KRD Y +R G+G CRDF AG C RGS CRF H D N+RDGG S
Sbjct: 286 SRSPHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLNYRDGGRS 345
Query: 721 EDNLAERLGSRPERGHISRYADREGPGYQSRDRLP------DMHHLEDELHRNRSRGTIT 560
E + AE SR E SRYAD EGP RD++ +D RN SR +
Sbjct: 346 EIDQAESWESRQEHRRASRYADAEGPIDYPRDKVARGGYGNQYDGEKDVPVRNNSRSNVR 405
Query: 559 CRDFVKGNCRWGASCRFSHDGASGDNYDKGTRSASFNHGQDNQASRTGVSLCKYFTATKC 380
C DF+KG C G+SC+FSH GASGD YD+ R +H + + R G LCKYF KC
Sbjct: 406 CNDFLKGKCHRGSSCKFSHHGASGDRYDRHDR----DHERKREPHRVGGILCKYFAMGKC 461
Query: 379 YKVD-CKFSHDD-TSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSDLVKVSGW- 209
+ D C+FSHDD + E RP G DD+N W KW+ D+ K S W
Sbjct: 462 FNGDRCRFSHDDPPCDSPEGRPRDGKWGHNLDDENKPW-EDTKWNG-AAALDIAKSSEWG 519
Query: 208 -DENVVRKDTAVTVLPDRTNEKPGHSFENEKRAWGSTEPLFMSSDREIGVSPHRGSAGNL 32
++N + T V G S +NE + W ++ +S+ + S H + N+
Sbjct: 520 SNDNGNKNFTDSMVADKSIGNSWGQSLDNENKPWATSASKDKASEGDSWGSSHWRARSNI 579
Query: 31 NSLNISE 11
+ I E
Sbjct: 580 ANTGIPE 586
>ref|XP_002278177.1| PREDICTED: uncharacterized protein LOC100267803 [Vitis vinifera]
Length = 913
Score = 189 bits (480), Expect = 2e-45
Identities = 118/307 (38%), Positives = 153/307 (49%), Gaps = 13/307 (4%)
Frame = -3
Query: 892 SRSPLHNSKRDPYASGDR---GTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGGHS 722
SRSP + KRD Y +R G+G CRDF AG C RGS CRF H D N+RDGG S
Sbjct: 161 SRSPHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLNYRDGGRS 220
Query: 721 EDNLAERLGSRPERGHISRYADREGPGYQSRDRLP------DMHHLEDELHRNRSRGTIT 560
E + AE SR E SRYAD EGP RD++ +D RN SR +
Sbjct: 221 EIDQAESWESRQEHRRASRYADAEGPIDYPRDKVARGGYGNQYDGEKDVPVRNNSRSNVR 280
Query: 559 CRDFVKGNCRWGASCRFSHDGASGDNYDKGTRSASFNHGQDNQASRTGVSLCKYFTATKC 380
C DF+KG C G+SC+FSH GASGD YD+ R +H + + R G LCKYF KC
Sbjct: 281 CNDFLKGKCHRGSSCKFSHHGASGDRYDRHDR----DHERKREPHRVGGILCKYFAMGKC 336
Query: 379 YKVD-CKFSHDD-TSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSDLVKVSGW- 209
+ D C+FSHDD + E RP G DD+N W KW+ D+ K S W
Sbjct: 337 FNGDRCRFSHDDPPCDSPEGRPRDGKWGHNLDDENKPW-EDTKWNG-AAALDIAKSSEWG 394
Query: 208 -DENVVRKDTAVTVLPDRTNEKPGHSFENEKRAWGSTEPLFMSSDREIGVSPHRGSAGNL 32
++N + T V G S +NE + W ++ +S+ + S H + N+
Sbjct: 395 SNDNGNKNFTDSMVADKSIGNSWGQSLDNENKPWATSASKDKASEGDSWGSSHWRARSNI 454
Query: 31 NSLNISE 11
+ I E
Sbjct: 455 ANTGIPE 461
>emb|CAN61511.1| hypothetical protein VITISV_013331 [Vitis vinifera]
Length = 913
Score = 189 bits (480), Expect = 2e-45
Identities = 118/307 (38%), Positives = 153/307 (49%), Gaps = 13/307 (4%)
Frame = -3
Query: 892 SRSPLHNSKRDPYASGDR---GTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGGHS 722
SRSP + KRD Y +R G+G CRDF AG C RGS CRF H D N+RDGG S
Sbjct: 161 SRSPHVDFKRDSYGFSERSRNGSGVSSQRCRDFVAGRCSRGSQCRFLHQDNLNYRDGGRS 220
Query: 721 EDNLAERLGSRPERGHISRYADREGPGYQSRDRLP------DMHHLEDELHRNRSRGTIT 560
E + AE SR E SRYAD EGP RD++ +D RN SR +
Sbjct: 221 EIDQAESWESRQEHRRASRYADAEGPIDYPRDKVARGGYGNQYDGEKDVPVRNNSRSNVR 280
Query: 559 CRDFVKGNCRWGASCRFSHDGASGDNYDKGTRSASFNHGQDNQASRTGVSLCKYFTATKC 380
C DF+KG C G+SC+FSH GASGD YD+ R +H + + R G LCKYF KC
Sbjct: 281 CNDFLKGKCHRGSSCKFSHHGASGDRYDRHDR----DHERKREPHRVGGILCKYFAMGKC 336
Query: 379 YKVD-CKFSHDD-TSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSDLVKVSGW- 209
+ D C+FSHDD + E RP G DD+N W KW+ D+ K S W
Sbjct: 337 FNGDRCRFSHDDPPCDSPEGRPRDGKWGHNLDDENKPW-EDTKWNG-AAALDIAKSSEWG 394
Query: 208 -DENVVRKDTAVTVLPDRTNEKPGHSFENEKRAWGSTEPLFMSSDREIGVSPHRGSAGNL 32
++N + T V G S +NE + W ++ +S+ + S H + N+
Sbjct: 395 SNDNGNKNFTDSMVADKSIGNSWGQSLDNENKPWATSASKDKASEGDSWGSSHWRARSNI 454
Query: 31 NSLNISE 11
+ I E
Sbjct: 455 ANTGIPE 461
>gb|EOX92488.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
2 [Theobroma cacao]
Length = 967
Score = 109 bits (272), Expect = 2e-21
Identities = 80/263 (30%), Positives = 114/263 (43%), Gaps = 36/263 (13%)
Frame = -3
Query: 901 QNRSRSPLHNSKRDP--YASGDRGTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGG 728
++RSRSP+ +R + +G +C++F AG CRRGS C+F H D +H DG
Sbjct: 156 RSRSRSPVRGIRRQSGFHERTRSRSGVSTQICKEFMAGRCRRGSQCQFLHQDIQSHEDGW 215
Query: 727 HSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRDF 548
DN ++ G + +G Y + R T C D+
Sbjct: 216 ---DNRQKKAGGS------KYFTPNDGKEYLIKS----------------GRSTDCCNDY 250
Query: 547 VKGNCRWGASCRFSHDGASGDNYDKGT--------------RSASFNHGQDNQASRTGVS 410
+KGNCR GASCRF+HDGAS D + +G+ R A+ + +A R+ V
Sbjct: 251 LKGNCRRGASCRFAHDGAS-DGFSRGSINEVSRERESNKRNRVATPERDGEREARRSDVP 309
Query: 409 LCKYFTATKCYKVD-CKFSHDDTSRNHESRPPGDIG--------------GQRFDDKNNS 275
CKY+ A C C+FSH +R R GD G G +F D + S
Sbjct: 310 -CKYYAAGNCRNGKYCRFSHHGQARASPERSRGDRGGWGQSLVSVDKLRDGAKFRDADAS 368
Query: 274 W-----LNGPKWDDEGRPSDLVK 221
+ NGPKW D ++ K
Sbjct: 369 YNVEKSRNGPKWSDADASNEAEK 391
>gb|EOX92487.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, putative isoform
1 [Theobroma cacao]
Length = 946
Score = 109 bits (272), Expect = 2e-21
Identities = 80/263 (30%), Positives = 114/263 (43%), Gaps = 36/263 (13%)
Frame = -3
Query: 901 QNRSRSPLHNSKRDP--YASGDRGTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGG 728
++RSRSP+ +R + +G +C++F AG CRRGS C+F H D +H DG
Sbjct: 175 RSRSRSPVRGIRRQSGFHERTRSRSGVSTQICKEFMAGRCRRGSQCQFLHQDIQSHEDGW 234
Query: 727 HSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRDF 548
DN ++ G + +G Y + R T C D+
Sbjct: 235 ---DNRQKKAGGS------KYFTPNDGKEYLIKS----------------GRSTDCCNDY 269
Query: 547 VKGNCRWGASCRFSHDGASGDNYDKGT--------------RSASFNHGQDNQASRTGVS 410
+KGNCR GASCRF+HDGAS D + +G+ R A+ + +A R+ V
Sbjct: 270 LKGNCRRGASCRFAHDGAS-DGFSRGSINEVSRERESNKRNRVATPERDGEREARRSDVP 328
Query: 409 LCKYFTATKCYKVD-CKFSHDDTSRNHESRPPGDIG--------------GQRFDDKNNS 275
CKY+ A C C+FSH +R R GD G G +F D + S
Sbjct: 329 -CKYYAAGNCRNGKYCRFSHHGQARASPERSRGDRGGWGQSLVSVDKLRDGAKFRDADAS 387
Query: 274 W-----LNGPKWDDEGRPSDLVK 221
+ NGPKW D ++ K
Sbjct: 388 YNVEKSRNGPKWSDADASNEAEK 410
>gb|EMJ09602.1| hypothetical protein PRUPE_ppa001169mg [Prunus persica]
Length = 890
Score = 108 bits (270), Expect = 3e-21
Identities = 78/242 (32%), Positives = 108/242 (44%), Gaps = 13/242 (5%)
Frame = -3
Query: 901 QNRSRSPLHNSKRDP-YASGDRG-TGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGG 728
Q+ SRSP +R+ + +R +G +C+DF AG CRR SDC+F H ++N+ D
Sbjct: 157 QSWSRSPDRGYRRESVFLDRNRSRSGVSAQLCKDFTAGRCRRASDCQFLHEGSSNYDDS- 215
Query: 727 HSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRDF 548
SR +G S+Y+ G + R ++ C DF
Sbjct: 216 ---------WDSRHRKGGASKYSPDTG-----------------DYPLKSGRSSVYCTDF 249
Query: 547 VKGNCRWGASCRFSHDGASGDNYDKGT----------RSASFNHGQDNQASRTGVSLCKY 398
KG CR G+SC+F H AS D Y KG+ R AS G D R+G CK+
Sbjct: 250 AKGKCRRGSSCKFDHHRAS-DGYSKGSMNERENERRKRDASTERGADRVPHRSGDIPCKF 308
Query: 397 FTATKC-YKVDCKFSHDDTSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSDLVK 221
F A C K C+FSH +R R D G D +W +GP+W D SD K
Sbjct: 309 FAAGNCRNKKYCRFSHHIQARASPERKSRD-GRWGLSDAGPAW-DGPRWSDTVALSDAAK 366
Query: 220 VS 215
++
Sbjct: 367 LT 368
>ref|XP_002307020.2| hypothetical protein POPTR_0005s06240g [Populus trichocarpa]
gi|550338234|gb|EEE94016.2| hypothetical protein
POPTR_0005s06240g [Populus trichocarpa]
Length = 858
Score = 103 bits (257), Expect = 1e-19
Identities = 83/283 (29%), Positives = 116/283 (40%), Gaps = 20/283 (7%)
Frame = -3
Query: 901 QNRSRSPLHNSKRDP--YASGDRGTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGG 728
Q+RSRSP++ R+ Y +G +C+DF AG CRRGS C+F H D + D
Sbjct: 134 QSRSRSPVYGFGRESGAYDRTRSRSGVSAQLCKDFVAGRCRRGSHCQFLHQDTETYEDD- 192
Query: 727 HSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRDF 548
RP + S+Y + H + R C +F
Sbjct: 193 ----------WERPRKTAASKY---------------PISHDTKQYPMGSGRSANCCTNF 227
Query: 547 VKGNCRWGASCRFSHDGASG--------------DNYDKGTRSASFNHGQDNQASRTGVS 410
+KGNCR G SCR++H GAS DN D+ R AS + + SR
Sbjct: 228 LKGNCRRGESCRYAHHGASDPSSRGSANEVIRERDN-DRRRRYASPERRAERETSRAADI 286
Query: 409 LCKYFTATKCYKVD-CKFSHDDTSRNHESRPPGDI---GGQRFDDKNNSWLNGPKWDDEG 242
CK+F A C C+FSH D + + D+ Q D+ SW GPKW D
Sbjct: 287 PCKFFAAGNCQNGKYCRFSHHDQTLASPDKRSRDVRWPPSQNSDELEKSW-KGPKWSD-S 344
Query: 241 RPSDLVKVSGWDENVVRKDTAVTVLPDRTNEKPGHSFENEKRA 113
SD K S D+N + + + GH+ + +K A
Sbjct: 345 HTSDSAKFSE-DKNEKLDAPNLRLSARHMEDGWGHNPDEDKTA 386
>gb|EXB40990.1| Zinc finger CCCH domain-containing protein 38 [Morus notabilis]
Length = 954
Score = 102 bits (254), Expect = 2e-19
Identities = 81/265 (30%), Positives = 118/265 (44%), Gaps = 22/265 (8%)
Frame = -3
Query: 901 QNRSRSPLHNSKRD---PYASGDRGTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDG 731
+ RSRSP+ + +R+ P S R +G +C+DF AG CRRG+ C F H +G
Sbjct: 161 RGRSRSPVRSLRRESGFPDRSRSR-SGVSSQLCKDFIAGRCRRGNHCMFLH-------EG 212
Query: 730 GHSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRD 551
D+ + SR +G S+Y++ + Y R P ++ C D
Sbjct: 213 NEDYDDYWD---SRHRKGTSSKYSNLDTRDYPLRSGRP----------------SVPCND 253
Query: 550 FVKGNCRWGASCRFSHDGASGDNYDKG--------------TRSASFNHGQDNQASRTGV 413
FVKG CR GASCRF H G S D + KG R S G +++ RT
Sbjct: 254 FVKGRCRRGASCRFEHHGVS-DGFSKGYSNEVSRDKENDRMKRDNSAERGVEHEFRRTSD 312
Query: 412 SLCKYFTATKCYK-VDCKFSHDDTSRNHESRPPGD--IGGQRFDDKNNSW-LNGPKWDDE 245
CK+F A C C+FSH R D G++ DD N + +G KW+D
Sbjct: 313 IPCKFFAAGNCRNGRHCRFSHHSQPYESPDRKSQDRWASGRKPDDVNRVFDGHGSKWNDT 372
Query: 244 GRPSDLVKVS-GWDENVVRKDTAVT 173
D K++ + N+ +D++ T
Sbjct: 373 VIVPDAAKLNEDINRNICTRDSSST 397
>ref|XP_002527649.1| hypothetical protein RCOM_1278130 [Ricinus communis]
gi|223532954|gb|EEF34720.1| hypothetical protein
RCOM_1278130 [Ricinus communis]
Length = 886
Score = 100 bits (248), Expect = 1e-18
Identities = 83/282 (29%), Positives = 114/282 (40%), Gaps = 21/282 (7%)
Frame = -3
Query: 901 QNRSRSPLHNSKRDP--YASGDRGTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGG 728
++RSRSP R+P Y + +C+DFAAG CRRG+ C+F H + D
Sbjct: 135 RSRSRSPDRGFGREPGLYDRSRSRSAVSSQICKDFAAGRCRRGNHCQFLHQGTQTYEDDW 194
Query: 727 HSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRDF 548
R + S+Y + H E R T +C DF
Sbjct: 195 E-----------RHRKTATSQYP---------------IPHDSREYPTGSGRSTDSCSDF 228
Query: 547 VKGNCRWGASCRFSHDGAS-------------GDNYDKGTRSASFNHGQDNQASRTGVSL 407
+KGNCR GASCRF+H GA+ N D+ R AS D + R
Sbjct: 229 LKGNCRRGASCRFAHHGATHAAGKGSSNEVTRERNSDRRHRDASPERHGDREIRRPADVP 288
Query: 406 CKYFTATKCYKVD-CKFSHD-----DTSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDE 245
CK+F A C C+FSH R+ + R D Q DD W NGPKW
Sbjct: 289 CKFFAAGNCRNGKYCRFSHQGQALLSPERSRDGRFSHD---QNADDIEKVW-NGPKWSST 344
Query: 244 GRPSDLVKVSGWDENVVRKDTAVTVLPDRTNEKPGHSFENEK 119
+D VK++ D+N + +++ GH E +K
Sbjct: 345 S-TTDAVKLNE-DKNGTVGELDHRATARSVDDRWGHCLEEDK 384
>ref|XP_002310510.2| hypothetical protein POPTR_0007s03970g [Populus trichocarpa]
gi|566179504|ref|XP_006380374.1| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
gi|566179506|ref|XP_006380375.1| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
gi|550334088|gb|EEE90960.2| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
gi|550334089|gb|ERP58171.1| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
gi|550334090|gb|ERP58172.1| hypothetical protein
POPTR_0007s03970g [Populus trichocarpa]
Length = 860
Score = 98.2 bits (243), Expect = 5e-18
Identities = 99/362 (27%), Positives = 137/362 (37%), Gaps = 63/362 (17%)
Frame = -3
Query: 901 QNRSRSPLHNSKRDPYASGDRGTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGGHS 722
++RSRSP+H + S + +C+DF AG CRRGS C F H D D
Sbjct: 140 RSRSRSPVHGFGHERTRSISSVSA---QLCKDFVAGRCRRGSHCPFLHQDTQTCEDDWE- 195
Query: 721 EDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRDFVK 542
RP + S+Y + H + R C +F+K
Sbjct: 196 ---------RRPRKASASKY---------------PISHDSKQYPMGSGRSADCCNEFLK 231
Query: 541 GNCRWGASCRFSHDGASG--------------DNYDKGTRSASFNHGQDNQASRTGVSLC 404
G+CR G SCR++H GAS DN D+ R AS + + R C
Sbjct: 232 GSCRRGESCRYAHHGASDPSSRGSANDGIRERDN-DRRHRYASPERRAERETRRAADIPC 290
Query: 403 KYFTATKCYKVD-CKFSHDDTSRNHESR------PPGDIGGQRFDDKNNSWLNGPKWDDE 245
K+F A C C+FSH+D + + + R PP Q DD SW N PKW E
Sbjct: 291 KFFAAGNCRNGKYCRFSHNDQTPSPDKRSRDGRWPP----SQNSDDVEKSW-NDPKW-SE 344
Query: 244 GRPSDLVKVS---------------------GWDENVVRKDT-------------AVTVL 167
SD K+S GW N+V T L
Sbjct: 345 SHTSDAAKLSENKNEKLDAPELRLSVRCMEDGWGHNLVENKTHNNPPTNEVVEIDKKEAL 404
Query: 166 PDRTNEKPGHSFENEKRA---W-GSTEPLFMSSDREIGVSP----HRGSAGNLNSLNISE 11
P +T +S +E+RA W G E MS D + P ++G +L+S + +
Sbjct: 405 PLKTENAGDNSNVSEQRAPENWLGDME---MSPDWNYRLQPSNHINKGEHASLSSCELQD 461
Query: 10 SS 5
S
Sbjct: 462 GS 463
>ref|XP_003528041.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like isoform
X1 [Glycine max] gi|571460649|ref|XP_006581758.1|
PREDICTED: zinc finger CCCH domain-containing protein
38-like isoform X2 [Glycine max]
gi|571460651|ref|XP_006581759.1| PREDICTED: zinc finger
CCCH domain-containing protein 38-like isoform X3
[Glycine max] gi|571460654|ref|XP_006581760.1| PREDICTED:
zinc finger CCCH domain-containing protein 38-like
isoform X4 [Glycine max]
Length = 828
Score = 97.4 bits (241), Expect = 8e-18
Identities = 107/343 (31%), Positives = 137/343 (39%), Gaps = 53/343 (15%)
Frame = -3
Query: 898 NRSRSPLHNSKRDPYASGDRG---TGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGG 728
+RSRSP H + D + DR G CRDFAAG CRRGS C F H D NH DG
Sbjct: 106 SRSRSPPHGFRWDSGVN-DRSRMRAGGSTQPCRDFAAGKCRRGSHCHFLH-DNQNHEDGW 163
Query: 727 HSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRDF 548
ED E R A REG Y + R C +F
Sbjct: 164 --EDKYREDGAPRYS-------APREGRDYSLKS----------------GRSDEACINF 198
Query: 547 VKGNCRWGASCRFSH------------DGASGD-NYDKGTRSASFNHGQDNQASRTGVSL 407
KG CR GASC+F H DG + + D+ R +SF G + +R G +L
Sbjct: 199 PKGRCRMGASCKFVHHNNSDGHSKVSVDGLTREREIDRRHRDSSFEQGSGHGPNR-GDTL 257
Query: 406 CKYFTATKCYKVD-CKFSHD-DTSRNHE---------SRPPGD---IGGQRFDD--KNNS 275
CK+F C C+FSHD R+H S P GD + + D N
Sbjct: 258 CKFFANESCRNGKYCRFSHDRQACRSHNRRLRDDRWASNPGGDYHMLDRPKLSDSVSPNR 317
Query: 274 WLNGPKWDDEGRPSDLVKVSGWD---------------------ENVVRKDTAVTVLPDR 158
G +W +G +D KV WD ENVV + T L R
Sbjct: 318 RPRGDRWGSDGNKADADKV--WDSPERNDTVAVSDTAKLVEDKSENVVAAEQGFTPLAMR 375
Query: 157 TNEKPGHSFENEKRAWGSTEPLFMSSDREIGVSPHRGSAGNLN 29
+ GHS +K S +P SSD++ S G+A N++
Sbjct: 376 --DGWGHSL--DKSRVHSKQP--FSSDKKEADSWIAGNAANMH 412
>gb|ESW09702.1| hypothetical protein PHAVU_009G149100g [Phaseolus vulgaris]
Length = 858
Score = 96.7 bits (239), Expect = 1e-17
Identities = 83/280 (29%), Positives = 112/280 (40%), Gaps = 35/280 (12%)
Frame = -3
Query: 904 VQNRSRSPLHNSKRDPYASGDRG---TGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRD 734
V++RSRSP H+ + D + DR +G CRDFAAG CRRGS C F H D+ NH D
Sbjct: 125 VRSRSRSPPHSFRWDSGVN-DRNRMRSGGSTQPCRDFAAGKCRRGSHCHFLH-DSQNHED 182
Query: 733 GGHSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCR 554
++ E G EG Y + R C
Sbjct: 183 SWENKSR---------EDGAPRYSVPHEGRDYSLKS----------------GRSNEACT 217
Query: 553 DFVKGNCRWGASCRFSHDGASGDN-------------YDKGTRSASFNHGQDNQASRTGV 413
+F KG CR GASC+F H S + D+ R +SF G + +R+
Sbjct: 218 NFAKGRCRMGASCKFVHHDISDGHVKVSVDELTREREIDRRHRDSSFEQGGGHGPNRSSD 277
Query: 412 SLCKYFTATKCYKVD-CKFSHD------DTSRNHESRPPGDIGG--QRFD-------DKN 281
+LCK+F C C+FSHD R + R + GG R D D
Sbjct: 278 TLCKFFANGNCRNGKYCRFSHDRQACRSPNRRLRDDRWASNPGGDHHRLDRPKLSDSDSP 337
Query: 280 NSWLNGPKWDDEGRPSDLVKV---SGWDENVVRKDTAVTV 170
N +W +G +D KV W++ V D+A V
Sbjct: 338 NRRPRDDRWGSDGNKADADKVWDSPKWNDTVAVSDSAKLV 377
>ref|NP_001060944.1| Os08g0135800 [Oryza sativa Japonica Group]
gi|75225153|sp|Q6YYC0.1|C3H55_ORYSJ RecName: Full=Zinc
finger CCCH domain-containing protein 55; Short=OsC3H55
gi|38636820|dbj|BAD03060.1| unknown protein [Oryza
sativa Japonica Group] gi|46390802|dbj|BAD16308.1|
unknown protein [Oryza sativa Japonica Group]
gi|113622913|dbj|BAF22858.1| Os08g0135800 [Oryza sativa
Japonica Group]
Length = 958
Score = 92.8 bits (229), Expect = 2e-16
Identities = 78/280 (27%), Positives = 116/280 (41%), Gaps = 18/280 (6%)
Frame = -3
Query: 901 QNRSRSPLHNSKRDPY-ASGDRGTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGGH 725
++RSRSP + + + R +G CRDF AG CRRGS+CRF H D + H
Sbjct: 205 RSRSRSPYFSDRGSEWRVERSRSSGGPALPCRDFVAGRCRRGSNCRFPHEDGVRRQFDEH 264
Query: 724 SEDNLAERLGSRPERGHISR-YADREGPGYQSRDRLPDMHHLED-----ELHRNRSRGTI 563
+ SR + GH +R + D R+R P H ++ R R T+
Sbjct: 265 YP------VDSREKYGHQNRDFMDPREQDDYLRNRPPRGGHYDEGTWERSEPRREYRSTM 318
Query: 562 TCRDFVKGNCRWGASCRFSHDGAS--GDNYDK------GTRSASFNHGQDNQASRTGVSL 407
C DFVKG C GA+CR+ HD ++ G D+ G ++G + RT +
Sbjct: 319 PCHDFVKGRCSRGANCRYVHDDSTPHGGWRDEVRDNAIGRSGPDSSYGNRTEHRRTNKNP 378
Query: 406 CKYFTATKCYK-VDCKFSHDDTSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSD 230
CK+F C + +C + H++ S++ D G G P+
Sbjct: 379 CKFFANGGCRRGQNCPYLHEEASQSQMGLGAPDEPGY-----------------TGGPTT 421
Query: 229 LVKVSGWDE--NVVRKDTAVTVLPDRTNEKPGHSFENEKR 116
W E N V+ + V DR N P + N+ R
Sbjct: 422 RGDYLSWSEQNNSVQASSHVLSRDDRENPVPQGTGRNDSR 461
>gb|EAZ41439.1| hypothetical protein OsJ_25961 [Oryza sativa Japonica Group]
Length = 940
Score = 92.8 bits (229), Expect = 2e-16
Identities = 78/280 (27%), Positives = 116/280 (41%), Gaps = 18/280 (6%)
Frame = -3
Query: 901 QNRSRSPLHNSKRDPY-ASGDRGTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGGH 725
++RSRSP + + + R +G CRDF AG CRRGS+CRF H D + H
Sbjct: 205 RSRSRSPYFSDRGSEWRVERSRSSGGPALPCRDFVAGRCRRGSNCRFPHEDGVRRQFDEH 264
Query: 724 SEDNLAERLGSRPERGHISR-YADREGPGYQSRDRLPDMHHLED-----ELHRNRSRGTI 563
+ SR + GH +R + D R+R P H ++ R R T+
Sbjct: 265 YP------VDSREKYGHQNRDFMDPREQDDYLRNRPPRGGHYDEGTWERSEPRREYRSTM 318
Query: 562 TCRDFVKGNCRWGASCRFSHDGAS--GDNYDK------GTRSASFNHGQDNQASRTGVSL 407
C DFVKG C GA+CR+ HD ++ G D+ G ++G + RT +
Sbjct: 319 PCHDFVKGRCSRGANCRYVHDDSTPHGGWRDEVRDNAIGRSGPDSSYGNRTEHRRTNKNP 378
Query: 406 CKYFTATKCYK-VDCKFSHDDTSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSD 230
CK+F C + +C + H++ S++ D G G P+
Sbjct: 379 CKFFANGGCRRGQNCPYLHEEASQSQMGLGAPDEPGY-----------------TGGPTT 421
Query: 229 LVKVSGWDE--NVVRKDTAVTVLPDRTNEKPGHSFENEKR 116
W E N V+ + V DR N P + N+ R
Sbjct: 422 RGDYLSWSEQNNSVQASSHVLSRDDRENPVPQGTGRNDSR 461
>ref|XP_006578794.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
isoform X4 [Glycine max]
Length = 833
Score = 91.7 bits (226), Expect = 4e-16
Identities = 80/255 (31%), Positives = 101/255 (39%), Gaps = 17/255 (6%)
Frame = -3
Query: 898 NRSRSPLHNSKRDPYASGDRG---TGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGG 728
+RSRSP H + D + DR G CRDFAAG CRRGS C F H D NH D
Sbjct: 111 SRSRSPPHGFRWDSGVN-DRNRMRAGGSTQPCRDFAAGKCRRGSHCHFLH-DNQNHEDSW 168
Query: 727 HSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRDF 548
ED E R H EG Y + R C +F
Sbjct: 169 --EDKYREDGAPRYSAPH-------EGRDYSLKS----------------GRSNEACINF 203
Query: 547 VKGNCRWGASCRFSH----DG---------ASGDNYDKGTRSASFNHGQDNQASRTGVSL 407
KG CR GASC+F H DG A D+ R +SF G + +R+G +L
Sbjct: 204 PKGRCRMGASCKFVHHNNSDGHSKVSVDELAREREIDRRHRDSSFEQGGGHGPNRSGDTL 263
Query: 406 CKYFTATKCYKVD-CKFSHDDTSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSD 230
CK+F C C+FSHD + +R D + L+ PK D P+
Sbjct: 264 CKFFANGHCRNGKYCRFSHDRQACRSPNRRSRDDRWASNPGGDYHMLDRPKLSDSVSPNR 323
Query: 229 LVKVSGWDENVVRKD 185
+ W + R D
Sbjct: 324 RPRDDRWGSDGNRAD 338
>ref|XP_006578792.1| PREDICTED: zinc finger CCCH domain-containing protein 38-like
isoform X2 [Glycine max]
gi|571451625|ref|XP_006578793.1| PREDICTED: zinc finger
CCCH domain-containing protein 38-like isoform X3
[Glycine max] gi|571451627|ref|XP_003523233.2|
PREDICTED: zinc finger CCCH domain-containing protein
38-like isoform X1 [Glycine max]
Length = 836
Score = 91.7 bits (226), Expect = 4e-16
Identities = 80/255 (31%), Positives = 101/255 (39%), Gaps = 17/255 (6%)
Frame = -3
Query: 898 NRSRSPLHNSKRDPYASGDRG---TGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGG 728
+RSRSP H + D + DR G CRDFAAG CRRGS C F H D NH D
Sbjct: 114 SRSRSPPHGFRWDSGVN-DRNRMRAGGSTQPCRDFAAGKCRRGSHCHFLH-DNQNHEDSW 171
Query: 727 HSEDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLEDELHRNRSRGTITCRDF 548
ED E R H EG Y + R C +F
Sbjct: 172 --EDKYREDGAPRYSAPH-------EGRDYSLKS----------------GRSNEACINF 206
Query: 547 VKGNCRWGASCRFSH----DG---------ASGDNYDKGTRSASFNHGQDNQASRTGVSL 407
KG CR GASC+F H DG A D+ R +SF G + +R+G +L
Sbjct: 207 PKGRCRMGASCKFVHHNNSDGHSKVSVDELAREREIDRRHRDSSFEQGGGHGPNRSGDTL 266
Query: 406 CKYFTATKCYKVD-CKFSHDDTSRNHESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPSD 230
CK+F C C+FSHD + +R D + L+ PK D P+
Sbjct: 267 CKFFANGHCRNGKYCRFSHDRQACRSPNRRSRDDRWASNPGGDYHMLDRPKLSDSVSPNR 326
Query: 229 LVKVSGWDENVVRKD 185
+ W + R D
Sbjct: 327 RPRDDRWGSDGNRAD 341
>ref|XP_006659097.1| PREDICTED: zinc finger CCCH domain-containing protein 55-like
[Oryza brachyantha]
Length = 920
Score = 91.3 bits (225), Expect = 6e-16
Identities = 79/281 (28%), Positives = 112/281 (39%), Gaps = 20/281 (7%)
Frame = -3
Query: 898 NRSRSPLHNSKRDPY-ASGDRGTGPRMSVCRDFAAGNCRRGSDCRFFHPDAANHRDGGHS 722
+RSRSP + + A R G CRDF AG CRRGS+CR H D + H
Sbjct: 174 SRSRSPYFTDRGSEWRAERGRAPGGPALPCRDFVAGRCRRGSNCRLPHEDGVRRQFDEHY 233
Query: 721 EDNLAERLGSRPERGHISRYADREGPGYQSRDRLPDMHHLE-DELHRNRSRGTITCRDFV 545
+ ER G + SR D SR D E E R R T+ C DFV
Sbjct: 234 PVDSRERYGHQNREFMDSREQDDYLRSRPSRGGHYDEGTWERPEPPRRDYRSTMQCHDFV 293
Query: 544 KGNCRWGASCRFSHDGAS----------GDNYDKGTRSASFNHGQDNQASRTGVSLCKYF 395
KG C GA+CR+ HD ++ G +G +S+ G + RT + CK+F
Sbjct: 294 KGRCSRGANCRYIHDDSTSHVGWRDEVRGSAIGRGGPDSSY--GSRTEHRRTNKNPCKFF 351
Query: 394 TATKCYK-VDCKFSHDDTSRNH-----ESRPPGDIGGQRFDDKNNSWLNGPKWDDEGRPS 233
+C + +C + H++ S++ P G GG P+
Sbjct: 352 ADGRCRRGQNCPYLHEEASQSQMGLGAPDEPLGYTGG---------------------PT 390
Query: 232 DLVKVSGWDE--NVVRKDTAVTVLPDRTNEKPGHSFENEKR 116
S W E N V+ + + DR N P + ++ R
Sbjct: 391 TRGNYSNWSEQNNAVQASSHILSRDDRENPVPQSTGRSDSR 431