BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028228
         (787 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356662.1| PREDICTED: DNA polymerase theta-like [Solanu...   166   2e-66
ref|XP_004245418.1| PREDICTED: DNA polymerase theta-like [Solanu...   157   1e-60
gb|EOY29653.1| Helicases,ATP-dependent helicases,nucleic acid bi...    59   7e-13
gb|EMJ27875.1| hypothetical protein PRUPE_ppa020963mg [Prunus pe...    63   6e-12
ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...    65   3e-08
emb|CBI20904.3| unnamed protein product [Vitis vinifera]               65   3e-08
ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform...    64   5e-08
ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, par...    64   5e-08
ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus comm...    51   5e-08
ref|XP_004138885.1| PREDICTED: DNA polymerase theta-like [Cucumi...    54   7e-07
gb|EXC32790.1| DNA polymerase theta [Morus notabilis]                  58   4e-06

>ref|XP_006356662.1| PREDICTED: DNA polymerase theta-like [Solanum tuberosum]
          Length = 2144

 Score =  166 bits (419), Expect(2) = 2e-66
 Identities = 92/138 (66%), Positives = 98/138 (71%)
 Frame = -3

Query: 416 VEAQXXXXXXXXXXXKPVISPDSHVVRNRGHGEDVLVTTQVTGNSELKQFASNFXXXXXX 237
           VEAQ           K  I  DSHVV NRGHG+DVLVTTQV GNSELKQFA+NF      
Sbjct: 95  VEAQSTTTEAKTSKEKSDIPSDSHVVENRGHGKDVLVTTQVNGNSELKQFATNFLSLYCS 154

Query: 236 XXXXXXXXXSAQNEGASKRSGSPSILDVDNKNAKRIRCISSENNSNINRKSNSGSTALNS 57
                    SAQ EG SKRSGSP +L+VDNKNAKRIRCISSEN+SNINR+SNS   ALNS
Sbjct: 155 ELPSSLSLPSAQREGGSKRSGSPPLLEVDNKNAKRIRCISSENDSNINRRSNSECAALNS 214

Query: 56  IEIAEGNTSGETRISLRK 3
           IEI EGNTSGE RISLRK
Sbjct: 215 IEITEGNTSGEARISLRK 232



 Score =  114 bits (284), Expect(2) = 2e-66
 Identities = 57/65 (87%), Positives = 60/65 (92%)
 Frame = -2

Query: 609 KKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDDSKPSHKARGTPVKRNL 430
           KKKRKS+SPSLKP RAKKDVKT+QEGSP  KGSL+G LVTSQDDSKPSH ARGTPVKRNL
Sbjct: 17  KKKRKSLSPSLKPTRAKKDVKTTQEGSPSMKGSLNGYLVTSQDDSKPSHIARGTPVKRNL 76

Query: 429 TLEIG 415
           TLEIG
Sbjct: 77  TLEIG 81


>ref|XP_004245418.1| PREDICTED: DNA polymerase theta-like [Solanum lycopersicum]
          Length = 2168

 Score =  157 bits (396), Expect(2) = 1e-60
 Identities = 82/120 (68%), Positives = 91/120 (75%)
 Frame = -3

Query: 362 ISPDSHVVRNRGHGEDVLVTTQVTGNSELKQFASNFXXXXXXXXXXXXXXXSAQNEGASK 183
           I  DSHVV NRGHG+DVLVTT+V GNSELKQFA+NF               SAQ EG SK
Sbjct: 137 IHSDSHVVENRGHGKDVLVTTKVNGNSELKQFATNFLSLYCSELPSSLSLPSAQREGGSK 196

Query: 182 RSGSPSILDVDNKNAKRIRCISSENNSNINRKSNSGSTALNSIEIAEGNTSGETRISLRK 3
           RSGS  +L+VDNKNAKR+RCISSEN+SN+NR+SNS   ALNSIEI EGNTSGE RI LRK
Sbjct: 197 RSGSSPLLEVDNKNAKRVRCISSENDSNLNRRSNSECAALNSIEITEGNTSGEARIILRK 256



 Score =  103 bits (258), Expect(2) = 1e-60
 Identities = 54/65 (83%), Positives = 56/65 (86%)
 Frame = -2

Query: 609 KKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDDSKPSHKARGTPVKRNL 430
           KKKRKS+SPSLKP RAKKDVKT QE SP TKGSL+G L TSQDDSK SH ARG PVKRNL
Sbjct: 41  KKKRKSLSPSLKPTRAKKDVKTIQEVSPSTKGSLNGYLGTSQDDSKSSHIARGAPVKRNL 100

Query: 429 TLEIG 415
           TLEIG
Sbjct: 101 TLEIG 105


>gb|EOY29653.1| Helicases,ATP-dependent helicases,nucleic acid binding,ATP
           binding,DNA-directed DNA polymerases,DNA binding
           [Theobroma cacao]
          Length = 2146

 Score = 59.3 bits (142), Expect(2) = 7e-13
 Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = -2

Query: 627 ISSLLQKKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDDS--KPSHKAR 454
           I      KKRK+ SP LK  R +K+ KT+ EGSP  KG+LD  L TSQ++   +PS    
Sbjct: 10  IDQFFASKKRKTQSPCLKTGRFEKNAKTTVEGSPSAKGTLDNYLRTSQENEIVQPSCTIL 69

Query: 453 G-TPVKRNLTLEIGRST 406
           G  PVKR+L  EI +S+
Sbjct: 70  GQDPVKRSLASEIDKSS 86



 Score = 41.2 bits (95), Expect(2) = 7e-13
 Identities = 37/120 (30%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
 Frame = -3

Query: 335 NRGHGEDVLVTTQVTGNSELKQFASNFXXXXXXXXXXXXXXXSAQNEGASKRSGSPSILD 156
           N   G+   V  Q   NSELKQFA++F               S       KR GS S+L 
Sbjct: 123 NFDFGDPAEVAAQGRENSELKQFATDFLSLYCSEVQPHVGSPSQLKANDQKRHGSLSMLS 182

Query: 155 VDNKNAKRIRCISSENNSNI--------NRKSNSGSTALN-SIEIAEGNTSGETRISLRK 3
            ++K  K+   IS +  + +        N K+ +G   LN S E+  G+   E + SLRK
Sbjct: 183 EEDKRFKKRYLISHQLQTEVETACSTKKNLKNETGEFILNLSREVNTGSNLIELQASLRK 242


>gb|EMJ27875.1| hypothetical protein PRUPE_ppa020963mg [Prunus persica]
          Length = 2169

 Score = 63.2 bits (152), Expect(2) = 6e-12
 Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
 Frame = -2

Query: 627 ISSLLQKKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDD---SKPSHK- 460
           I+     KKRK +SP LK  R +KDVK   EGSP  KG+LD  L+ SQ++   S+PS+K 
Sbjct: 9   INQFFASKKRKPLSPVLKSGRNEKDVKVKVEGSPSAKGTLDNYLLASQENNIISEPSYKV 68

Query: 459 ----ARGTPVKRNLTLEIGRSTIHNF 394
               A+   V+RNLT EI  S    F
Sbjct: 69  CDSLAQQDQVRRNLTSEIDNSLKDEF 94



 Score = 34.3 bits (77), Expect(2) = 6e-12
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = -3

Query: 302 TQVTGNSELKQFASNFXXXXXXXXXXXXXXXSAQNEGASKRSGSPSILDVDNKNAKRIRC 123
           T+    +ELK FA++F               S       KR  SPS+LD ++K  K+  C
Sbjct: 135 TEGEDRAELKDFAADFLSLYCSDLQPNESSLSEMKVNDHKRQASPSLLDREDKTFKKRHC 194

Query: 122 ISSENNSNINRKSNSGS 72
           I+  N S++  +++  S
Sbjct: 195 IT--NQSHVEHETSYSS 209


>ref|XP_002281624.2| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase theta-like [Vitis
           vinifera]
          Length = 2181

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = -2

Query: 627 ISSLLQKKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDDSKPSH--KAR 454
           I      KKRK +SP LK  R +KD K + +GSP +KG+LD  LVT  DD+  +    A 
Sbjct: 10  IDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTYPDDNSTARGSSAG 69

Query: 453 GTPVKRNLTLEI 418
             PVKRNLTLEI
Sbjct: 70  KGPVKRNLTLEI 81


>emb|CBI20904.3| unnamed protein product [Vitis vinifera]
          Length = 2091

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
 Frame = -2

Query: 627 ISSLLQKKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDDSKPSH--KAR 454
           I      KKRK +SP LK  R +KD K + +GSP +KG+LD  LVT  DD+  +    A 
Sbjct: 10  IDQFFSSKKRKPLSPGLKTGRIEKDSKRAVDGSPSSKGTLDNYLVTYPDDNSTARGSSAG 69

Query: 453 GTPVKRNLTLEI 418
             PVKRNLTLEI
Sbjct: 70  KGPVKRNLTLEI 81


>ref|XP_006476151.1| PREDICTED: DNA polymerase theta-like isoform X1 [Citrus sinensis]
           gi|568844552|ref|XP_006476152.1| PREDICTED: DNA
           polymerase theta-like isoform X2 [Citrus sinensis]
          Length = 2191

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = -2

Query: 627 ISSLLQKKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDD---SKPSHKA 457
           I      KKRKS SPS+K  RA+KD K + E SP  KG+LD  L  SQDD   SK S  +
Sbjct: 10  IDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDGHTSKQSLLS 69

Query: 456 RGTPVKRNLTLEIGR 412
           R   VKRNL+LEI +
Sbjct: 70  RHEVVKRNLSLEIDK 84


>ref|XP_006450613.1| hypothetical protein CICLE_v100072282mg, partial [Citrus
           clementina] gi|557553839|gb|ESR63853.1| hypothetical
           protein CICLE_v100072282mg, partial [Citrus clementina]
          Length = 1810

 Score = 64.3 bits (155), Expect = 5e-08
 Identities = 39/75 (52%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
 Frame = -2

Query: 627 ISSLLQKKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDD---SKPSHKA 457
           I      KKRKS SPS+K  RA+KD K + E SP  KG+LD  L  SQDD   SK S  +
Sbjct: 10  IDQFYASKKRKSRSPSVKSGRAEKDAKITVEVSPSAKGTLDNYLKNSQDDGHTSKQSLLS 69

Query: 456 RGTPVKRNLTLEIGR 412
           R   VKRNL+LEI +
Sbjct: 70  RHEVVKRNLSLEIDK 84


>ref|XP_002516582.1| DNA polymerase theta, putative [Ricinus communis]
           gi|223544402|gb|EEF45923.1| DNA polymerase theta,
           putative [Ricinus communis]
          Length = 2154

 Score = 51.2 bits (121), Expect(2) = 5e-08
 Identities = 33/70 (47%), Positives = 42/70 (60%)
 Frame = -2

Query: 627 ISSLLQKKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDDSKPSHKARGT 448
           I+     KKRK++SP LK    K+   TS +GSP  KG+LD  LV SQD ++    +R  
Sbjct: 10  INQFFASKKRKALSPGLKYGIEKEATITS-DGSPNAKGTLDNYLVNSQDQNR-GLLSRQD 67

Query: 447 PVKRNLTLEI 418
            VKRNL LEI
Sbjct: 68  SVKRNLALEI 77



 Score = 32.7 bits (73), Expect(2) = 5e-08
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = -3

Query: 335 NRGHG--EDVLVTTQVTGNSELKQFASNFXXXXXXXXXXXXXXXSAQNEGASKRSGSPSI 162
           N GH   E   V  Q   +SELKQFA++F               S       KR GSP +
Sbjct: 115 NAGHVAVEGCSVPRQSAESSELKQFANDFLSLYCSELQSTATSPSKPKLNDHKRHGSPLL 174

Query: 161 LDVDNKNAKRIRC 123
           +D  +K +K+  C
Sbjct: 175 VDDRDKTSKKRHC 187


>ref|XP_004138885.1| PREDICTED: DNA polymerase theta-like [Cucumis sativus]
          Length = 2144

 Score = 54.3 bits (129), Expect(2) = 7e-07
 Identities = 36/81 (44%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
 Frame = -2

Query: 627 ISSLLQKKKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQD---DSKPSHKA 457
           I      KKRK ++PSLK     K+ K + EGSP  KG+LD  LV SQD      PSH  
Sbjct: 10  IDQFYASKKRKPLTPSLKSGSYDKNGKKALEGSPGAKGTLDNYLVISQDHGSSDNPSHSV 69

Query: 456 R-----GTPVKRNLTLEIGRS 409
           R        VKRNL L+I  S
Sbjct: 70  RENLSAQNLVKRNLLLKINSS 90



 Score = 25.8 bits (55), Expect(2) = 7e-07
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
 Frame = -3

Query: 302 TQVTGNSELKQFASNFXXXXXXXXXXXXXXXSAQNEGA-SKRSGSPSILDVDNKNAKRIR 126
           T  T   ELKQFA++F                 + +    KR  SPS L+ + K  K++ 
Sbjct: 131 TPCTEKPELKQFAADFLSLYCSNELQTTVSSPVEQKVTFLKRHSSPSHLEGEAKLPKKMH 190

Query: 125 CISSENNSNINRKSNSGSTALNSIEIAEGN 36
            I   +N+     S++         ++EGN
Sbjct: 191 SIVGPSNAESEPDSSNA--------LSEGN 212


>gb|EXC32790.1| DNA polymerase theta [Morus notabilis]
          Length = 1092

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
 Frame = -2

Query: 606 KKRKSVSPSLKPARAKKDVKTSQEGSPCTKGSLDGCLVTSQDDSKPSHK---ARGTPVKR 436
           KKRK+ SP  KP R +K  KT  EGSP  KG+LD  LV SQD+   + +   AR  PVKR
Sbjct: 67  KKRKAKSPCSKPGRNEKGGKTVVEGSPSGKGTLDNYLVASQDEPLCAGRDSLARQDPVKR 126

Query: 435 NLTLEI 418
           +L++EI
Sbjct: 127 SLSVEI 132