BLASTX nr result

ID: Atropa21_contig00028178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028178
         (773 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578...   112   1e-22
ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily membe...    80   5e-15
gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          79   1e-12

>ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578882, partial [Solanum
           tuberosum]
          Length = 606

 Score =  112 bits (281), Expect = 1e-22
 Identities = 59/144 (40%), Positives = 94/144 (65%), Gaps = 6/144 (4%)
 Frame = -1

Query: 746 IVGKFT*GKSNLKEIHKVILSQCNIK*ECTIGLL------IRLSLFEDYVQMISTLEYYL 585
           ++GKF+ G  ++ ++ K+I  QC +K E  IGLL      IR SL EDYV+++S  ++Y+
Sbjct: 44  MIGKFSYGWPDILDLRKLIPKQCELKGEVDIGLLCNRYVLIRASLLEDYVKLLSKPQFYI 103

Query: 584 KAHNDYWQMRPVIWNIWFNS*IETSMAVA*ISFPYLPPNIFSKEVVFSLASTVGKPLTLD 405
             ++  + MR + W+  F+   ET+ A+A ISFP LPPN F KE +FS+A+ VG+PL +D
Sbjct: 104 THNHWSYPMRTLKWDPLFDPEEETTTAIAWISFPSLPPNFFGKETIFSMAAAVGRPLQVD 163

Query: 404 VAIRNQTQLSCAKVKVEVDKDIQK 333
           +A +N+T+ SCA+ + +  K   K
Sbjct: 164 LATQNKTKPSCARTEEKEQKQDNK 187


>ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily member 4-like [Solanum
           tuberosum]
          Length = 1068

 Score = 80.1 bits (196), Expect(2) = 5e-15
 Identities = 40/62 (64%), Positives = 49/62 (79%)
 Frame = -1

Query: 533 FNS*IETSMAVA*ISFPYLPPNIFSKEVVFSLASTVGKPLTLDVAIRNQTQLSCAKVKVE 354
           FN   +T+ A+A ISFP LPPN F +EVVFSLA  VGKPL +D+A RNQT+ SCA++KVE
Sbjct: 2   FNPEEKTTTAIAWISFPALPPNFFGREVVFSLAVAVGKPLQVDMATRNQTRPSCARMKVE 61

Query: 353 VD 348
           VD
Sbjct: 62  VD 63



 Score = 27.7 bits (60), Expect(2) = 5e-15
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = -3

Query: 345 GHSEMECRVMHPEFNVKQQQPN*REETNEIIGTTANNKKVLSSGKVVG 202
           GH E +C V HP   +K++  +      ++     + K V    K +G
Sbjct: 88  GHDEQQCYVEHPNLYLKKENSDQEPRDKKLGALETDEKHVEDENKNIG 135


>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 6/105 (5%)
 Frame = -1

Query: 770 IQQNL*YRIVGKFT*GKSNLKEIHKVILSQCNIK*ECTIG------LLIRLSLFEDYVQM 609
           ++QNL Y +V KF+ G+ +L E+ K I  Q  IK  C IG      +LIRLSL EDY  +
Sbjct: 20  VRQNLQYAVVAKFSYGRPDLYELRKAIPIQLEIKGPCNIGFLEERHILIRLSLLEDYATL 79

Query: 608 ISTLEYYLKAHNDYWQMRPVIWNIWFNS*IETSMAVA*ISFPYLP 474
           +S   + L+  N Y+ +R + W+ WFN   ET++A+A ISFP LP
Sbjct: 80  MSKA-WELRVRNRYFPLRFLKWDPWFNPEEETTIAIAWISFPGLP 123


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