BLASTX nr result
ID: Atropa21_contig00028106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028106
(898 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 135 9e-57
ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 135 9e-57
gb|EOY25088.1| Translation elongation factor EF1B/ribosomal prot... 135 5e-56
ref|XP_002518855.1| structural constituent of ribosome, putative... 129 5e-55
ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 127 8e-54
ref|XP_002886339.1| ribosomal protein S6 family protein [Arabido... 126 5e-53
ref|XP_006300553.1| hypothetical protein CARUB_v10020948mg [Caps... 125 7e-53
ref|XP_006391611.1| hypothetical protein EUTSA_v10023690mg [Eutr... 123 2e-52
ref|XP_002297965.2| hypothetical protein POPTR_0001s10930g [Popu... 122 3e-52
gb|EXC14469.1| 30S ribosomal protein S6 alpha [Morus notabilis] 130 1e-51
gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana] 122 3e-51
ref|NP_176632.1| 30S ribosomal protein S6 alpha [Arabidopsis tha... 122 3e-51
ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin... 125 4e-51
ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 125 4e-51
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin... 124 5e-51
ref|XP_006476347.1| PREDICTED: 30S ribosomal protein S6 alpha, c... 124 8e-51
ref|XP_006439300.1| hypothetical protein CICLE_v10022161mg [Citr... 123 1e-50
sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alp... 117 2e-50
gb|AFK44002.1| unknown [Lotus japonicus] 122 2e-50
gb|ESW32184.1| hypothetical protein PHAVU_002G300600g [Phaseolus... 122 2e-49
>ref|XP_006343825.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum tuberosum]
Length = 196
Score = 135 bits (339), Expect(2) = 9e-57
Identities = 71/104 (68%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Frame = +1
Query: 208 YPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXX--PPIAPGSGITAVEDKEEPQCPPGLR 381
+ K V+ S I+KAQTL PP P SGI+AVEDKEEPQCPPGLR
Sbjct: 32 FTKRVNNSGQILKAQTLEFSGSFFEGGFGGGNADEPPTTPWSGISAVEDKEEPQCPPGLR 91
Query: 382 PYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
PYETM VLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 92 PYETMVVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVI 135
Score = 113 bits (282), Expect(2) = 9e-57
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKP+S+ LEATL TDDDVIRSS+FKIRKRK
Sbjct: 136 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPESIVPLEATLVTDDDVIRSSTFKIRKRK 195
Query: 690 Y 692
Y
Sbjct: 196 Y 196
>ref|XP_004245494.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Solanum lycopersicum]
Length = 196
Score = 135 bits (339), Expect(2) = 9e-57
Identities = 71/104 (68%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Frame = +1
Query: 208 YPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXX--PPIAPGSGITAVEDKEEPQCPPGLR 381
+ K V+ S I+KAQTL PP P SGI+AVEDKEEPQCPPGLR
Sbjct: 32 FTKRVNNSGQILKAQTLEFSGSFFEGGFGGGNADEPPTTPWSGISAVEDKEEPQCPPGLR 91
Query: 382 PYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
PYETM VLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 92 PYETMVVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVI 135
Score = 113 bits (282), Expect(2) = 9e-57
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKP+S+ ALEATL DDDVIRSS+FKIRKRK
Sbjct: 136 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPESIVALEATLVADDDVIRSSTFKIRKRK 195
Query: 690 Y 692
Y
Sbjct: 196 Y 196
>gb|EOY25088.1| Translation elongation factor EF1B/ribosomal protein S6 family
protein [Theobroma cacao]
Length = 337
Score = 135 bits (341), Expect(2) = 5e-56
Identities = 74/122 (60%), Positives = 81/122 (66%), Gaps = 8/122 (6%)
Frame = +1
Query: 172 PFTTFPVASNAVYPKGVSYSSL--------IVKAQTLXXXXXXXXXXXXXXXXPPIAPGS 327
PF +F + + K S +SL VKA+TL PP PGS
Sbjct: 155 PFLSFTHSLKPIPKKSKSLTSLKRGNFTTVTVKARTLDFSGSFFEGGFGSDDDPPSQPGS 214
Query: 328 GITAVEDKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRG 507
GITA+EDKEEPQCPPGLR YETM VLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRG
Sbjct: 215 GITALEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRG 274
Query: 508 VL 513
V+
Sbjct: 275 VV 276
Score = 109 bits (273), Expect(2) = 5e-56
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI++KNKAGETNTYLDGIYLLFTYF KP+SM LE LNTDDDVIRSSSFK+RKRK
Sbjct: 277 PLAYSIKKKNKAGETNTYLDGIYLLFTYFMKPESMATLEVALNTDDDVIRSSSFKVRKRK 336
Query: 690 Y 692
+
Sbjct: 337 F 337
>ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
gi|223541842|gb|EEF43388.1| structural constituent of
ribosome, putative [Ricinus communis]
Length = 205
Score = 129 bits (324), Expect(2) = 5e-55
Identities = 73/115 (63%), Positives = 77/115 (66%), Gaps = 2/115 (1%)
Frame = +1
Query: 175 FTTFPVASNA-VYPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXX-PPIAPGSGITAVED 348
F FP S A K S SL +K+Q L PP GSG+TAVED
Sbjct: 30 FPCFPSLSFAHTIKKRHSVRSLTIKSQALDFSGSFYEGSGFGSEEDPPTLTGSGMTAVED 89
Query: 349 KEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
KE PQCPPGLR YETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 90 KEPPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVI 144
Score = 113 bits (282), Expect(2) = 5e-55
Identities = 53/61 (86%), Positives = 59/61 (96%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI++KNKAGETNTYLDGIYLLFTYFTKP+S+ LEATLNTDDD+IRSSSFKIRKRK
Sbjct: 145 PLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEMLEATLNTDDDIIRSSSFKIRKRK 204
Query: 690 Y 692
+
Sbjct: 205 F 205
>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
vinifera]
Length = 199
Score = 127 bits (318), Expect(2) = 8e-54
Identities = 70/118 (59%), Positives = 77/118 (65%), Gaps = 4/118 (3%)
Frame = +1
Query: 172 PFTTFPVASNA----VYPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGITA 339
P T+F V S +P+ L ++A TL P PG GI A
Sbjct: 23 PITSFTVFSGKQRFIYHPRRAP--GLSIRALTLDFSGSFFEGGFGSDDDPNSPPGPGIAA 80
Query: 340 VEDKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
VEDK+EPQCPPGLR YETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 81 VEDKDEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVI 138
Score = 111 bits (277), Expect(2) = 8e-54
Identities = 53/61 (86%), Positives = 57/61 (93%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI++KNKAGE+NTYLDGIYLLFTYFTKP+SM LEATL DDDVIRSSSFKIRKRK
Sbjct: 139 PLAYSIKKKNKAGESNTYLDGIYLLFTYFTKPESMEVLEATLTADDDVIRSSSFKIRKRK 198
Query: 690 Y 692
Y
Sbjct: 199 Y 199
>ref|XP_002886339.1| ribosomal protein S6 family protein [Arabidopsis lyrata subsp.
lyrata] gi|297332180|gb|EFH62598.1| ribosomal protein S6
family protein [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 126 bits (316), Expect(2) = 5e-53
Identities = 69/118 (58%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Frame = +1
Query: 169 RPFTTF--PVASNAVYPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGI-TA 339
RPF + P+ ++ + S +VK+Q L P PGSG+ TA
Sbjct: 32 RPFISKSKPICASLQQQQKRDGSQFVVKSQALDFSGTFFEGGFGSDDDPTSPPGSGVSTA 91
Query: 340 VEDKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
+EDK EPQCPPGLR YETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 92 LEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVI 149
Score = 109 bits (272), Expect(2) = 5e-53
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSIR+KNKAGETNTYLDGIYLLFTYFTKP+S+T LE L DDD+IRSSSFKI+KRK
Sbjct: 150 PLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLETVLTADDDIIRSSSFKIKKRK 209
Query: 690 Y 692
Y
Sbjct: 210 Y 210
>ref|XP_006300553.1| hypothetical protein CARUB_v10020948mg [Capsella rubella]
gi|482569263|gb|EOA33451.1| hypothetical protein
CARUB_v10020948mg [Capsella rubella]
Length = 211
Score = 125 bits (314), Expect(2) = 7e-53
Identities = 72/118 (61%), Positives = 79/118 (66%), Gaps = 3/118 (2%)
Frame = +1
Query: 169 RPFTTFP--VASNAVYPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGI-TA 339
RPF + VAS P+ S L+VK+Q L P GSG+ TA
Sbjct: 32 RPFISKSKHVASIQQQPQKRDGSQLVVKSQALDFSGTFFEGGFGSDDDPISPSGSGVSTA 91
Query: 340 VEDKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
+EDK EPQCPPGLR YETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 92 LEDKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVI 149
Score = 109 bits (273), Expect(2) = 7e-53
Identities = 51/61 (83%), Positives = 57/61 (93%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSIR+KNKAGETNTYLDGIYLLFTYFT+P+S+T LEA L DDD+IRSSSFKI+KRK
Sbjct: 150 PLAYSIRKKNKAGETNTYLDGIYLLFTYFTRPESITPLEAVLTADDDIIRSSSFKIKKRK 209
Query: 690 Y 692
Y
Sbjct: 210 Y 210
>ref|XP_006391611.1| hypothetical protein EUTSA_v10023690mg [Eutrema salsugineum]
gi|557088117|gb|ESQ28897.1| hypothetical protein
EUTSA_v10023690mg [Eutrema salsugineum]
Length = 209
Score = 123 bits (308), Expect(2) = 2e-52
Identities = 67/116 (57%), Positives = 76/116 (65%), Gaps = 1/116 (0%)
Frame = +1
Query: 169 RPFTTFPVASNAVYPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGI-TAVE 345
RPF + ++ + S +VK+Q L P GSG+ TA+E
Sbjct: 32 RPFISKSKPIASLQQQKRDNSGFVVKSQALDFSGTFFEGGFGSDDDPTSTSGSGVSTALE 91
Query: 346 DKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
DK EPQCPPGLR YETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 92 DKPEPQCPPGLRQYETMAVLRPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVI 147
Score = 110 bits (276), Expect(2) = 2e-52
Identities = 52/61 (85%), Positives = 57/61 (93%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSIR+KNKAGETNTYLDGIYLLFTYFTKP+S+T LEA L DDD+IRSSSFKI+KRK
Sbjct: 148 PLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESITPLEAVLTADDDIIRSSSFKIKKRK 207
Query: 690 Y 692
Y
Sbjct: 208 Y 208
>ref|XP_002297965.2| hypothetical protein POPTR_0001s10930g [Populus trichocarpa]
gi|550346990|gb|EEE82770.2| hypothetical protein
POPTR_0001s10930g [Populus trichocarpa]
Length = 240
Score = 122 bits (305), Expect(2) = 3e-52
Identities = 69/111 (62%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Frame = +1
Query: 184 FPVASNAVYPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSG-ITAVEDKEEP 360
FP S VY + S + VKAQT+ P GSG +TAVE+KE P
Sbjct: 70 FPNTSKLVY-RAHSNPTTAVKAQTVDFAGSFYEGGIGSDDEPDSPIGSGTMTAVEEKETP 128
Query: 361 QCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
CPPGLR YETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 129 PCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVV 179
Score = 110 bits (276), Expect(2) = 3e-52
Identities = 52/61 (85%), Positives = 58/61 (95%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI++KNKAGE+NTYLDGIYLLFTYFTKP+S+ LE TLNTDDDVIRSSSFK+RKRK
Sbjct: 180 PLAYSIKKKNKAGESNTYLDGIYLLFTYFTKPESIGILEQTLNTDDDVIRSSSFKVRKRK 239
Query: 690 Y 692
Y
Sbjct: 240 Y 240
>gb|EXC14469.1| 30S ribosomal protein S6 alpha [Morus notabilis]
Length = 209
Score = 130 bits (327), Expect(2) = 1e-51
Identities = 70/116 (60%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Frame = +1
Query: 169 RPFTTFPVASNAVYPKGVSYSSL-IVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGITAVE 345
RPFT SN + + + L +VKAQTL PP PG G+ AVE
Sbjct: 36 RPFTA---KSNLLLLSNKTRTGLSVVKAQTLDFSGSFFEGGIVSDEDPPSPPGPGLAAVE 92
Query: 346 DKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
DKEEP+CPPGLR +ETM VLRPDMSE+ERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 93 DKEEPECPPGLRQFETMVVLRPDMSEEERLALTQKYEELLVAGGGMYVEVFNRGVI 148
Score = 100 bits (250), Expect(2) = 1e-51
Identities = 48/61 (78%), Positives = 53/61 (86%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI++KN+AGETNTYLDGIYLLFTYFTKP+S+ LE L DDDVIRS S KIRKRK
Sbjct: 149 PLAYSIKKKNRAGETNTYLDGIYLLFTYFTKPESIGPLEEMLKADDDVIRSMSLKIRKRK 208
Query: 690 Y 692
Y
Sbjct: 209 Y 209
>gb|AAF19690.1|AC009519_24 F1N19.8 [Arabidopsis thaliana]
Length = 231
Score = 122 bits (306), Expect(2) = 3e-51
Identities = 64/96 (66%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = +1
Query: 229 SSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGI-TAVEDKEEPQCPPGLRPYETMAVL 405
S +VK+Q L P GSG+ TA+EDK EPQCPPGLR YETMAVL
Sbjct: 74 SQFVVKSQALDFSGTFFEGGFGSDDDPTSPSGSGVSTALEDKPEPQCPPGLRQYETMAVL 133
Query: 406 RPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
RPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 134 RPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVI 169
Score = 107 bits (267), Expect(2) = 3e-51
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSIR+KNKAGETNTYLDGIYLLFTYFTKP+S+ LE L DDD+IRSSSFKI+KRK
Sbjct: 170 PLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKKRK 229
Query: 690 Y 692
Y
Sbjct: 230 Y 230
>ref|NP_176632.1| 30S ribosomal protein S6 alpha [Arabidopsis thaliana]
gi|75161441|sp|Q8VY91.1|RR6_ARATH RecName: Full=30S
ribosomal protein S6 alpha, chloroplastic; Flags:
Precursor gi|18252237|gb|AAL61951.1| plastid ribosomal
protein S6, putative [Arabidopsis thaliana]
gi|21386993|gb|AAM47900.1| plastid ribosomal protein S6,
putative [Arabidopsis thaliana]
gi|21553658|gb|AAM62751.1| plastid ribosomal protein S6,
putative [Arabidopsis thaliana]
gi|332196127|gb|AEE34248.1| translation elongation
factor EF1B/ribosomal protein S6 family protein
[Arabidopsis thaliana]
Length = 207
Score = 122 bits (306), Expect(2) = 3e-51
Identities = 64/96 (66%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Frame = +1
Query: 229 SSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGI-TAVEDKEEPQCPPGLRPYETMAVL 405
S +VK+Q L P GSG+ TA+EDK EPQCPPGLR YETMAVL
Sbjct: 50 SQFVVKSQALDFSGTFFEGGFGSDDDPTSPSGSGVSTALEDKPEPQCPPGLRQYETMAVL 109
Query: 406 RPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
RPDMSEDERL LTQKYEELLVAGGGMYVEVFNRGV+
Sbjct: 110 RPDMSEDERLGLTQKYEELLVAGGGMYVEVFNRGVI 145
Score = 107 bits (267), Expect(2) = 3e-51
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSIR+KNKAGETNTYLDGIYLLFTYFTKP+S+ LE L DDD+IRSSSFKI+KRK
Sbjct: 146 PLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVPLETVLTADDDIIRSSSFKIKKRK 205
Query: 690 Y 692
Y
Sbjct: 206 Y 206
>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
gi|255625673|gb|ACU13181.1| unknown [Glycine max]
Length = 214
Score = 125 bits (313), Expect(2) = 4e-51
Identities = 66/114 (57%), Positives = 74/114 (64%)
Frame = +1
Query: 172 PFTTFPVASNAVYPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGITAVEDK 351
P T F + + YPK + ++AQTL P G G T VE+K
Sbjct: 41 PKTLFAESKSHFYPKRNDHG-FSIRAQTLDFSDSFFEGGFGSEDDPSSPGGPGFTGVEEK 99
Query: 352 EEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
EEPQCPPGLR YETM VLRPDMSEDERL LTQKYEE+LVAGGGMYVEVFNRGV+
Sbjct: 100 EEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVI 153
Score = 104 bits (259), Expect(2) = 4e-51
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI++KNKAGETNTYLDGIYLLFTYFTKP+S+T LE T+ TDD+VIRS S KIRKRK
Sbjct: 154 PLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRK 213
Query: 690 Y 692
Y
Sbjct: 214 Y 214
>ref|XP_004503594.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Cicer arietinum]
Length = 196
Score = 125 bits (315), Expect(2) = 4e-51
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = +1
Query: 310 PIAPGSGITAVEDKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYV 489
PI PG+G AVE+KEEPQCPPGLR YETMAVLRPDMSEDERL TQKYEELLVAGGGMY+
Sbjct: 68 PITPGTGFAAVEEKEEPQCPPGLRQYETMAVLRPDMSEDERLAFTQKYEELLVAGGGMYI 127
Query: 490 EVFNRGVL 513
EVFNRGV+
Sbjct: 128 EVFNRGVI 135
Score = 103 bits (257), Expect(2) = 4e-51
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI++KNK GE+NTY+DGIYLLFTYFTKP+S+TALEATL DD+V+RS+S KIRKRK
Sbjct: 136 PLAYSIKKKNKEGESNTYMDGIYLLFTYFTKPESITALEATLLADDNVVRSTSVKIRKRK 195
Query: 690 Y 692
Y
Sbjct: 196 Y 196
>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
gi|255628961|gb|ACU14825.1| unknown [Glycine max]
Length = 214
Score = 124 bits (312), Expect(2) = 5e-51
Identities = 67/114 (58%), Positives = 74/114 (64%)
Frame = +1
Query: 172 PFTTFPVASNAVYPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGITAVEDK 351
P T F + +PK Y ++AQTL P G G TAVE+K
Sbjct: 41 PKTLFAESRFHFHPKRNDYG-FSIRAQTLDFSDSFFEGGFGSEDVPSSPGGPGFTAVEEK 99
Query: 352 EEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
EEPQCPPGLR YETM VLRPDMSEDERL LTQKYEE+LVAGGGMYVEVFNRGV+
Sbjct: 100 EEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVI 153
Score = 104 bits (259), Expect(2) = 5e-51
Identities = 50/61 (81%), Positives = 56/61 (91%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI++KNKAGETNTYLDGIYLLFTYFTKP+S+T LE T+ TDD+VIRS S KIRKRK
Sbjct: 154 PLAYSIKKKNKAGETNTYLDGIYLLFTYFTKPESITPLEETMLTDDNVIRSMSSKIRKRK 213
Query: 690 Y 692
Y
Sbjct: 214 Y 214
>ref|XP_006476347.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic-like
[Citrus sinensis]
Length = 219
Score = 124 bits (311), Expect(2) = 8e-51
Identities = 72/122 (59%), Positives = 80/122 (65%), Gaps = 6/122 (4%)
Frame = +1
Query: 166 ARPFTTFPVASNAV--YPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPP--IAPGS-- 327
AR TF + ++ + K + SL VKAQTL P + PGS
Sbjct: 35 ARSLKTFRTNAKSLLLHKKNSNSVSLTVKAQTLDFSGSFFEGGGFGSDDDPTSVPPGSVG 94
Query: 328 GITAVEDKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRG 507
TA+EDKEEPQCPPGLR YETM VLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRG
Sbjct: 95 TATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRG 154
Query: 508 VL 513
V+
Sbjct: 155 VI 156
Score = 103 bits (258), Expect(2) = 8e-51
Identities = 48/60 (80%), Positives = 56/60 (93%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSIR++NKAGE+NTYLDGIYLLFTYFTKP+S+ ALE T+ DDDVIRSSSFK+RK+K
Sbjct: 157 PLAYSIRKRNKAGESNTYLDGIYLLFTYFTKPESIEALERTMKADDDVIRSSSFKVRKQK 216
>ref|XP_006439300.1| hypothetical protein CICLE_v10022161mg [Citrus clementina]
gi|557541562|gb|ESR52540.1| hypothetical protein
CICLE_v10022161mg [Citrus clementina]
Length = 219
Score = 123 bits (309), Expect(2) = 1e-50
Identities = 71/122 (58%), Positives = 80/122 (65%), Gaps = 6/122 (4%)
Frame = +1
Query: 166 ARPFTTFPVASNAV--YPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPP--IAPGS-- 327
AR TF + ++ + K + SL VKAQT+ P + PGS
Sbjct: 35 ARSLKTFRTNAKSLILHKKNSNSVSLTVKAQTIDFSGSFFEGGGFGSDDDPTSVPPGSVG 94
Query: 328 GITAVEDKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRG 507
TA+EDKEEPQCPPGLR YETM VLRPDMSEDERL LTQKYEELLVAGGGMYVEVFNRG
Sbjct: 95 TATAIEDKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRG 154
Query: 508 VL 513
V+
Sbjct: 155 VI 156
Score = 103 bits (258), Expect(2) = 1e-50
Identities = 48/60 (80%), Positives = 56/60 (93%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSIR++NKAGE+NTYLDGIYLLFTYFTKP+S+ ALE T+ DDDVIRSSSFK+RK+K
Sbjct: 157 PLAYSIRKRNKAGESNTYLDGIYLLFTYFTKPESIEALERTMKADDDVIRSSSFKVRKQK 216
>sp|P82403.2|RR6_SPIOL RecName: Full=30S ribosomal protein S6 alpha, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6 beta,
chloroplastic; Contains: RecName: Full=30S ribosomal
protein S6 gamma, chloroplastic; Contains: RecName:
Full=30S ribosomal protein S6 delta, chloroplastic;
Contains: RecName: Full=30S ribosomal protein S6
epsilon, chloroplastic; Flags: Precursor
gi|188036207|pdb|3BBN|F Chain F, Homology Model For The
Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome.
gi|7582401|gb|AAF64311.1|AF250383_1 plastid ribosomal
protein S6 precursor, partial [Spinacia oleracea]
Length = 168
Score = 117 bits (293), Expect(2) = 2e-50
Identities = 57/69 (82%), Positives = 62/69 (89%)
Frame = +1
Query: 307 PPIAPGSGITAVEDKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMY 486
PP P +G+ AVE+K EPQCPPGLR YETMAVLRPDM+EDERLTLTQKYEELLVAGG MY
Sbjct: 40 PPSTPPAGL-AVEEKPEPQCPPGLRQYETMAVLRPDMTEDERLTLTQKYEELLVAGGAMY 98
Query: 487 VEVFNRGVL 513
VEVFNRGV+
Sbjct: 99 VEVFNRGVI 107
Score = 109 bits (273), Expect(2) = 2e-50
Identities = 53/61 (86%), Positives = 57/61 (93%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI+RKNKAGETN YLDGIYLLFTYFTKP+S++ LEA L TDDDVIRSSSFKIRKRK
Sbjct: 108 PLAYSIKRKNKAGETNNYLDGIYLLFTYFTKPESISPLEAALVTDDDVIRSSSFKIRKRK 167
Query: 690 Y 692
Y
Sbjct: 168 Y 168
>gb|AFK44002.1| unknown [Lotus japonicus]
Length = 209
Score = 122 bits (305), Expect(2) = 2e-50
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = +1
Query: 322 GSGITAVEDKEEPQCPPGLRPYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFN 501
G+G+TA E+KEEPQCPPGLR YETMAVLRPDMSEDERL LTQKYEELLVAGGGMYVEVFN
Sbjct: 85 GTGLTATEEKEEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFN 144
Query: 502 RGVL 513
RGV+
Sbjct: 145 RGVI 148
Score = 104 bits (260), Expect(2) = 2e-50
Identities = 48/61 (78%), Positives = 57/61 (93%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAYSI++KNKAGETNTYLDGIYLL+TYFTKP+S+ ALE TL DDDV+RS++FKI+KRK
Sbjct: 149 PLAYSIKKKNKAGETNTYLDGIYLLYTYFTKPESIVALEETLLADDDVLRSTTFKIKKRK 208
Query: 690 Y 692
Y
Sbjct: 209 Y 209
>gb|ESW32184.1| hypothetical protein PHAVU_002G300600g [Phaseolus vulgaris]
Length = 214
Score = 122 bits (306), Expect(2) = 2e-49
Identities = 64/102 (62%), Positives = 71/102 (69%)
Frame = +1
Query: 208 YPKGVSYSSLIVKAQTLXXXXXXXXXXXXXXXXPPIAPGSGITAVEDKEEPQCPPGLRPY 387
+PKG S S + AQTL P G+G TAVE+KEEP CPPGLR Y
Sbjct: 53 HPKG-SGSKFSITAQTLDFSDSFFEGGFGSEDDPNSPGGTGFTAVEEKEEPPCPPGLRQY 111
Query: 388 ETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYVEVFNRGVL 513
ETM VLRPDM+EDERL LTQKYEE+LVAGGGMYVEVFNRGV+
Sbjct: 112 ETMMVLRPDMTEDERLALTQKYEEILVAGGGMYVEVFNRGVI 153
Score = 101 bits (251), Expect(2) = 2e-49
Identities = 47/61 (77%), Positives = 55/61 (90%)
Frame = +3
Query: 510 PLAYSIRRKNKAGETNTYLDGIYLLFTYFTKPDSMTALEATLNTDDDVIRSSSFKIRKRK 689
PLAY+I++KNKAGETNTYLDGIYLLFTYFTKP+S+ LE T+ TDD+V RS SFK+RKRK
Sbjct: 154 PLAYAIKKKNKAGETNTYLDGIYLLFTYFTKPESVKPLEETVLTDDNVFRSISFKVRKRK 213
Query: 690 Y 692
Y
Sbjct: 214 Y 214