BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028027
         (1413 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004237420.1| PREDICTED: general transcription factor IIH ...   741   0.0  
ref|XP_006363938.1| PREDICTED: general transcription factor IIH ...   733   0.0  
ref|XP_006366483.1| PREDICTED: general transcription factor IIH ...   721   0.0  
ref|XP_006363939.1| PREDICTED: general transcription factor IIH ...   628   e-177
gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus pe...   621   e-175
gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus...   620   e-175
emb|CBI16283.3| unnamed protein product [Vitis vinifera]              615   e-173
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   615   e-173
ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citr...   613   e-173
gb|EOY33067.1| General transcription factor II H2 isoform 1 [The...   610   e-172
ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor ...   610   e-172
ref|XP_006489788.1| PREDICTED: general transcription factor IIH ...   603   e-170
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ...   602   e-170
ref|XP_006491820.1| PREDICTED: general transcription factor IIH ...   602   e-169
ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citr...   600   e-169
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   589   e-165
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ...   587   e-165
ref|XP_004493385.1| PREDICTED: general transcription factor IIH ...   587   e-165
ref|XP_002892263.1| ATGTF2H2/GTF2H2 [Arabidopsis lyrata subsp. l...   586   e-165
ref|XP_006418067.1| hypothetical protein EUTSA_v10007730mg [Eutr...   584   e-164

>ref|XP_004237420.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
            lycopersicum]
          Length = 414

 Score =  741 bits (1913), Expect = 0.0
 Identities = 361/391 (92%), Positives = 364/391 (93%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXRIQKGLIRYLYIII 1117
            AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQY          RIQKGLIRYLYIII
Sbjct: 24   AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYRRRLRTATAARIQKGLIRYLYIII 83

Query: 1116 DFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLGGSPE 937
            DFSRAAAE+DYKPSRMVVVARQVEA+IREFFDQNPLSQI LVILKDGVAHCLTDLGGSPE
Sbjct: 84   DFSRAAAEMDYKPSRMVVVARQVEAYIREFFDQNPLSQIGLVILKDGVAHCLTDLGGSPE 143

Query: 936  AHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDILETIQ 757
            AHIKALMGKLGTSGDASLQNGLDLV DLLNQIPSYGHRE LILYSALSTCDPGDILETIQ
Sbjct: 144  AHIKALMGKLGTSGDASLQNGLDLVCDLLNQIPSYGHREALILYSALSTCDPGDILETIQ 203

Query: 756  KCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXXXXAV 577
            KCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEH          AV
Sbjct: 204  KCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHAPPPPAIAEFAV 263

Query: 576  ANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH 397
            ANLI MGFPQR AEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH
Sbjct: 264  ANLIKMGFPQRTAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH 323

Query: 396  LARSYHHLFPIRPFDDVSPSALKDLHKLPKNCFGCQLSLLNPGNFPGPQVACPNCKQHFC 217
            LARSYHHLFPIRPFDDVSPSALKD HKLPKNCFGCQLSLLNPGN PGPQVACPNCKQHFC
Sbjct: 324  LARSYHHLFPIRPFDDVSPSALKDFHKLPKNCFGCQLSLLNPGNLPGPQVACPNCKQHFC 383

Query: 216  LDCDIYIHESLHNCPGCESLRNSKTISDMDE 124
            LDCDIYIHESLHNCPGCESLRNSKTISDM+E
Sbjct: 384  LDCDIYIHESLHNCPGCESLRNSKTISDMEE 414


>ref|XP_006363938.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Solanum tuberosum]
          Length = 414

 Score =  733 bits (1893), Expect = 0.0
 Identities = 359/391 (91%), Positives = 361/391 (92%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXRIQKGLIRYLYIII 1117
            AWERTYADERSWESLQEDESGLLRPIDN TLSHAQY          RIQKGLIRYLYIII
Sbjct: 24   AWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATAARIQKGLIRYLYIII 83

Query: 1116 DFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLGGSPE 937
            D SRAAAE+DYKPSRMVVVARQVEAFIREFFDQNPLSQI LVILKDGVAHCLTDLGGSPE
Sbjct: 84   DLSRAAAEMDYKPSRMVVVARQVEAFIREFFDQNPLSQIGLVILKDGVAHCLTDLGGSPE 143

Query: 936  AHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDILETIQ 757
            AHIKALMGKLGTSGDASLQNGLDLV DLLNQIPSYGHRE LILYSALSTCDPGDILETIQ
Sbjct: 144  AHIKALMGKLGTSGDASLQNGLDLVCDLLNQIPSYGHREALILYSALSTCDPGDILETIQ 203

Query: 756  KCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXXXXAV 577
            K KASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEH          AV
Sbjct: 204  KYKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHAPPPPAIAEFAV 263

Query: 576  ANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH 397
            ANLI MGFPQR AEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH
Sbjct: 264  ANLIKMGFPQRTAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH 323

Query: 396  LARSYHHLFPIRPFDDVSPSALKDLHKLPKNCFGCQLSLLNPGNFPGPQVACPNCKQHFC 217
            LARSYHHLFPIRPFDDVSPSALKD HKLPKNCFGCQLSLLNPGN PGPQVACPNCKQHFC
Sbjct: 324  LARSYHHLFPIRPFDDVSPSALKDFHKLPKNCFGCQLSLLNPGNLPGPQVACPNCKQHFC 383

Query: 216  LDCDIYIHESLHNCPGCESLRNSKTISDMDE 124
            LDCDIYIHESLHNCPGCESLRNSKTISDM+E
Sbjct: 384  LDCDIYIHESLHNCPGCESLRNSKTISDMEE 414


>ref|XP_006366483.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
            tuberosum]
          Length = 418

 Score =  721 bits (1862), Expect = 0.0
 Identities = 356/395 (90%), Positives = 358/395 (90%), Gaps = 4/395 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXRIQKGLIRYLYIII 1117
            AWERTYADERSWESLQEDESGLLR IDNKTLSHAQY          RIQKGLIRYLYIII
Sbjct: 24   AWERTYADERSWESLQEDESGLLRLIDNKTLSHAQYRRRLRTATAARIQKGLIRYLYIII 83

Query: 1116 DFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLGGSPE 937
            DFSRAAAE+DYKPSRMVVVARQVEAFIREFFDQNPLSQI LVILKDG AHCLTDLGGSPE
Sbjct: 84   DFSRAAAEMDYKPSRMVVVARQVEAFIREFFDQNPLSQIGLVILKDGEAHCLTDLGGSPE 143

Query: 936  AHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDILETIQ 757
            AHIK LMGKLGTSGDASLQNGLDLV DLLNQIPSYGHRE LILYSALSTCDPGDILETIQ
Sbjct: 144  AHIKELMGKLGTSGDASLQNGLDLVCDLLNQIPSYGHREALILYSALSTCDPGDILETIQ 203

Query: 756  KCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXXXXAV 577
            K KASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEH          AV
Sbjct: 204  KYKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHAPPPPAIAEFAV 263

Query: 576  ANLIM----MGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
            ANLI     MGFPQR AEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV
Sbjct: 264  ANLIQMGVTMGFPQRTAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 323

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKDLHKLPKNCFGCQLSLLNPGNFPGPQVACPNCK 229
            SSPHLARSYHHLFPIRPFDDVSPS LKD HKLPKNCFGCQLS LNPGN PGPQVACPNCK
Sbjct: 324  SSPHLARSYHHLFPIRPFDDVSPSTLKDFHKLPKNCFGCQLSFLNPGNLPGPQVACPNCK 383

Query: 228  QHFCLDCDIYIHESLHNCPGCESLRNSKTISDMDE 124
            QHFCLDCDIYIHESLHNCPGCESLRNSKTISDM+E
Sbjct: 384  QHFCLDCDIYIHESLHNCPGCESLRNSKTISDMEE 418


>ref|XP_006363939.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X2
            [Solanum tuberosum]
          Length = 369

 Score =  628 bits (1620), Expect = e-177
 Identities = 313/343 (91%), Positives = 314/343 (91%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXRIQKGLIRYLYIII 1117
            AWERTYADERSWESLQEDESGLLRPIDN TLSHAQY          RIQKGLIRYLYIII
Sbjct: 24   AWERTYADERSWESLQEDESGLLRPIDNTTLSHAQYRRRLRTATAARIQKGLIRYLYIII 83

Query: 1116 DFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLGGSPE 937
            D SRAAAE+DYKPSRMVVVARQVEAFIREFFDQNPLSQI LVILKDGVAHCLTDLGGSPE
Sbjct: 84   DLSRAAAEMDYKPSRMVVVARQVEAFIREFFDQNPLSQIGLVILKDGVAHCLTDLGGSPE 143

Query: 936  AHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDILETIQ 757
            AHIKALMGKLGTSGDASLQNGLDLV DLLNQIPSYGHRE LILYSALSTCDPGDILETIQ
Sbjct: 144  AHIKALMGKLGTSGDASLQNGLDLVCDLLNQIPSYGHREALILYSALSTCDPGDILETIQ 203

Query: 756  KCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXXXXAV 577
            K KASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEH          AV
Sbjct: 204  KYKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHAPPPPAIAEFAV 263

Query: 576  ANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH 397
            ANLI MGFPQR AEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH
Sbjct: 264  ANLIKMGFPQRTAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH 323

Query: 396  LARSYHHLFPIRPFDDVSPSALKDLHKLPKNCFGCQLSLLNPG 268
            LARSYHHLFPIRPFDDVSPSALKD HKLPKNCFGCQLSLLNPG
Sbjct: 324  LARSYHHLFPIRPFDDVSPSALKDFHKLPKNCFGCQLSLLNPG 366


>gb|EMJ06452.1| hypothetical protein PRUPE_ppa006259mg [Prunus persica]
          Length = 420

 Score =  621 bits (1601), Expect = e-175
 Identities = 296/385 (76%), Positives = 330/385 (85%), Gaps = 1/385 (0%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXRIQKGLIRYLYIII 1117
            AWER YADERSWESLQEDESGLL+PIDN++L HAQY          RIQKGLIRY+YI+I
Sbjct: 29   AWERAYADERSWESLQEDESGLLQPIDNQSLKHAQYRRRLRAASTARIQKGLIRYVYIVI 88

Query: 1116 DFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLGGSPE 937
            D S+AAAE+D++PSRM VVA+ VEAFI EFF QNPLSQ+ LV +KDGVAHCLTDLGGSP 
Sbjct: 89   DLSKAAAEMDFRPSRMGVVAKHVEAFIIEFFYQNPLSQVGLVTIKDGVAHCLTDLGGSPN 148

Query: 936  AHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDILETIQ 757
            +H+KALMGKL  SGD+SLQN LDLV   L QIPSYGHREVLILYSALSTCDPGDI+ETIQ
Sbjct: 149  SHVKALMGKLECSGDSSLQNALDLVHGYLEQIPSYGHREVLILYSALSTCDPGDIMETIQ 208

Query: 756  KCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXXXXAV 577
            KCK SKIRCSVIGLSAE++ICKHLCQETGG+Y++ALDEPHLKEL+LEH          A+
Sbjct: 209  KCKKSKIRCSVIGLSAEIFICKHLCQETGGLYYIALDEPHLKELILEHAPPPPAIAEFAI 268

Query: 576  ANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH 397
            ANLI MGFPQRAAEG ++ICSCHKEAKVGGGYTCPRCKAR+C+LPTEC ICGLTL+SSPH
Sbjct: 269  ANLIKMGFPQRAAEGSVAICSCHKEAKVGGGYTCPRCKARVCDLPTECRICGLTLISSPH 328

Query: 396  LARSYHHLFPIRPFDDVSPSALKD-LHKLPKNCFGCQLSLLNPGNFPGPQVACPNCKQHF 220
            LARSYHHLFPI PFD+VSPS L D  +K P+ CFGCQ SLLNPGN P  +VACP CKQHF
Sbjct: 329  LARSYHHLFPIVPFDEVSPSLLIDQQNKFPRACFGCQQSLLNPGNKPSLRVACPKCKQHF 388

Query: 219  CLDCDIYIHESLHNCPGCESLRNSK 145
            CLDCDIYIH+SLHNCPGCES  +SK
Sbjct: 389  CLDCDIYIHDSLHNCPGCESASHSK 413


>gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus notabilis]
          Length = 423

 Score =  620 bits (1599), Expect = e-175
 Identities = 297/392 (75%), Positives = 329/392 (83%), Gaps = 1/392 (0%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXRIQKGLIRYLYIII 1117
            AWERTYADERSWESLQEDESGLLRPIDNKT  HAQY          RIQKGLIRYL+++I
Sbjct: 32   AWERTYADERSWESLQEDESGLLRPIDNKTFYHAQYRRRLRSASAVRIQKGLIRYLFLVI 91

Query: 1116 DFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLGGSPE 937
            D S+AAAE+D++PSRM VVA+ VEAFIREFFDQNPLSQ+ LV +KDGVAHCLTDLGGSPE
Sbjct: 92   DLSKAAAEMDFRPSRMAVVAKHVEAFIREFFDQNPLSQVGLVTIKDGVAHCLTDLGGSPE 151

Query: 936  AHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDILETIQ 757
            +H+K+LMGKL  SG++S+QN LDLV D LNQIPSYGHREVLI YSALSTCDPGDI+ETIQ
Sbjct: 152  SHVKSLMGKLECSGESSIQNALDLVHDYLNQIPSYGHREVLIFYSALSTCDPGDIMETIQ 211

Query: 756  KCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXXXXAV 577
            KCK SKIRCSVIGLSAE++ICKHLCQETGG Y VALDE H KEL+LEH          A+
Sbjct: 212  KCKKSKIRCSVIGLSAEIFICKHLCQETGGSYSVALDESHFKELILEHAPPPPAIAEYAI 271

Query: 576  ANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH 397
            ANLI MGFPQRAAE  I+ICSCHKEAK GGGYTCPRCKAR+CELPTEC  CGLTL+SSPH
Sbjct: 272  ANLIKMGFPQRAAESSIAICSCHKEAKAGGGYTCPRCKARVCELPTECQTCGLTLISSPH 331

Query: 396  LARSYHHLFPIRPFDDVSPSALKDLH-KLPKNCFGCQLSLLNPGNFPGPQVACPNCKQHF 220
            LARSYHHLFPI PFD++S S L D H KL K CFGCQ SLL  GN PGP+V+CP CK  F
Sbjct: 332  LARSYHHLFPIVPFDEMSTSLLSDPHRKLSKACFGCQQSLLGFGNKPGPRVSCPKCKHQF 391

Query: 219  CLDCDIYIHESLHNCPGCESLRNSKTISDMDE 124
            CLDCDIYIHESLHNCPGCES R+SK ++  +E
Sbjct: 392  CLDCDIYIHESLHNCPGCESARHSKPVAMSEE 423


>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  615 bits (1587), Expect = e-173
 Identities = 301/396 (76%), Positives = 330/396 (83%), Gaps = 5/396 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWER YADERSWESLQEDESGLLRPIDNKT+ HAQY               IQKGLIRYL
Sbjct: 99   AWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYL 158

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI++D SRAA+E+D+KPSRM VVA+ +EAFIREFFDQNPLSQI LV +KDG+A CLTDLG
Sbjct: 159  YIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLG 218

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSP++H+KALMGKL  SGD+SLQN LDLV   LNQIPSYGHREVLILYSALSTCDPGDI+
Sbjct: 219  GSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIM 278

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQ+CK SKIRCSVIGLSAE++IC+HLCQETGG Y VALDE H KEL+LEH        
Sbjct: 279  ETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIA 338

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A+ANLI MGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKAR+CELPTEC ICGLTLV
Sbjct: 339  EFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLV 398

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKDLH-KLPKNCFGCQLSLLNPGNFPGPQVACPNC 232
            SSPHLARSYHHLFPI PFD+VS S L + H +  + CFGCQ SLL PGN P   VACP C
Sbjct: 399  SSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKC 458

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTISDMDE 124
            KQHFCLDCDIYIHESLHNCPGCES R+SK +S  +E
Sbjct: 459  KQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTEE 494


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
            vinifera]
          Length = 433

 Score =  615 bits (1587), Expect = e-173
 Identities = 301/396 (76%), Positives = 330/396 (83%), Gaps = 5/396 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWER YADERSWESLQEDESGLLRPIDNKT+ HAQY               IQKGLIRYL
Sbjct: 38   AWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLIRYL 97

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI++D SRAA+E+D+KPSRM VVA+ +EAFIREFFDQNPLSQI LV +KDG+A CLTDLG
Sbjct: 98   YIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLTDLG 157

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSP++H+KALMGKL  SGD+SLQN LDLV   LNQIPSYGHREVLILYSALSTCDPGDI+
Sbjct: 158  GSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGDIM 217

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQ+CK SKIRCSVIGLSAE++IC+HLCQETGG Y VALDE H KEL+LEH        
Sbjct: 218  ETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIA 277

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A+ANLI MGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKAR+CELPTEC ICGLTLV
Sbjct: 278  EFAIANLIKMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLV 337

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKDLH-KLPKNCFGCQLSLLNPGNFPGPQVACPNC 232
            SSPHLARSYHHLFPI PFD+VS S L + H +  + CFGCQ SLL PGN P   VACP C
Sbjct: 338  SSPHLARSYHHLFPIPPFDEVSLSLLNNPHQRSSRACFGCQESLLIPGNKPTLCVACPKC 397

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTISDMDE 124
            KQHFCLDCDIYIHESLHNCPGCES R+SK +S  +E
Sbjct: 398  KQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTEE 433


>ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citrus clementina]
            gi|557522488|gb|ESR33855.1| hypothetical protein
            CICLE_v10005033mg [Citrus clementina]
          Length = 424

 Score =  613 bits (1580), Expect = e-173
 Identities = 295/391 (75%), Positives = 326/391 (83%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWER+YAD+RSWE+LQEDESG LRPIDN  + HAQY               IQKGLIRYL
Sbjct: 29   AWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTVATARIQKGLIRYL 88

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI+ID SRAAAE+D++PSRMVVVA+QVEAF+REFFDQNPLSQI LV +KDGVA+CLTDLG
Sbjct: 89   YIVIDLSRAAAEMDFRPSRMVVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG 148

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSPE+HIKALMGKLG SGD+S+QN LDLV  LLNQIPSYGHREVLILYSALSTCDPGDI+
Sbjct: 149  GSPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIM 208

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQKCK SKIRCSVIGLSAE++ICKHLCQETGG Y VALDE H KEL+LEH        
Sbjct: 209  ETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIA 268

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A+A+LI MGFPQRA EG ISICSCHKE K+G GYTCPRCKAR+CELPTECCICGL LV
Sbjct: 269  EFAIASLIKMGFPQRAGEGSISICSCHKEVKIGVGYTCPRCKARVCELPTECCICGLQLV 328

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKDLHKLPKN-CFGCQLSLLNPGNFPGPQVACPNC 232
            SSPHLARSYHHLFPI PFD+ +PS L DLH + ++ CFGCQ SLL  GN  G  VACP C
Sbjct: 329  SSPHLARSYHHLFPIAPFDEATPSRLNDLHNISRSTCFGCQQSLLASGNKAGLCVACPKC 388

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTI 139
            K+HFCL+CDIYIHESLHNCPGCESLR S  +
Sbjct: 389  KKHFCLECDIYIHESLHNCPGCESLRQSNPV 419


>gb|EOY33067.1| General transcription factor II H2 isoform 1 [Theobroma cacao]
            gi|508785812|gb|EOY33068.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
            gi|508785813|gb|EOY33069.1| General transcription factor
            II H2 isoform 1 [Theobroma cacao]
          Length = 420

 Score =  610 bits (1572), Expect = e-172
 Identities = 296/389 (76%), Positives = 323/389 (83%), Gaps = 5/389 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWERTY DERSWESLQEDESGLLRPIDNK L H+QY               IQKGLIRYL
Sbjct: 28   AWERTYTDERSWESLQEDESGLLRPIDNKALYHSQYRRRLRSLSSTATAARIQKGLIRYL 87

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            Y++ID SRAA+E D++PSR+VV+A+ VEAFIREFFDQNPLSQ+ L+ +KDGVA CLTDLG
Sbjct: 88   YLVIDLSRAASETDFRPSRIVVIAKHVEAFIREFFDQNPLSQVGLLTIKDGVAQCLTDLG 147

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSPE+HIKALM KL  SGD+SLQN LDLV   LNQIPSYGHREVLILY+ALSTCDPGDI+
Sbjct: 148  GSPESHIKALMNKLECSGDSSLQNALDLVDGYLNQIPSYGHREVLILYAALSTCDPGDIM 207

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQKCK SKIRCSVIGL+AE++ICKHLCQETGG Y VALDE H KEL+LEH        
Sbjct: 208  ETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIA 267

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A ANLI MGFPQRAAEG ISICSCHKEAKVG GYTCPRCKAR+CELPTEC ICGLTLV
Sbjct: 268  EFATANLIKMGFPQRAAEGSISICSCHKEAKVGAGYTCPRCKARVCELPTECRICGLTLV 327

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKD-LHKLPKNCFGCQLSLLNPGNFPGPQVACPNC 232
            SSPHLARSYHHLFPI PFD+V P +L D  HKL +NCFGCQ SLLNPGN PG  V CP C
Sbjct: 328  SSPHLARSYHHLFPIAPFDEVPPFSLNDPNHKLQRNCFGCQQSLLNPGNKPGLLVVCPKC 387

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSK 145
            K +FCLDCDIYIHESLHNCPGC+S R+SK
Sbjct: 388  KGYFCLDCDIYIHESLHNCPGCDSFRHSK 416


>ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor complex p47 subunit-like
            [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  610 bits (1572), Expect = e-172
 Identities = 292/385 (75%), Positives = 328/385 (85%), Gaps = 1/385 (0%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXRIQKGLIRYLYIII 1117
            AWER YADERSWESLQEDESGLLRPIDN++L HAQY          RIQKGLIRYLYI+I
Sbjct: 28   AWERAYADERSWESLQEDESGLLRPIDNQSLHHAQYRRRLRAATTARIQKGLIRYLYIVI 87

Query: 1116 DFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLGGSPE 937
            D S+AA+E+D++PSRM VVA+ VEAFIRE+F QNPLSQ+ LV +KDGV+H LTDLGGSPE
Sbjct: 88   DLSKAASEMDFRPSRMGVVAKHVEAFIREYFYQNPLSQVGLVTIKDGVSHILTDLGGSPE 147

Query: 936  AHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDILETIQ 757
            +H+KALMGKL  SGDASLQN LDLV+  L+QIPSYGHREVLI+YSALSTCDPGDI+ TIQ
Sbjct: 148  SHVKALMGKLECSGDASLQNALDLVQGYLDQIPSYGHREVLIMYSALSTCDPGDIMGTIQ 207

Query: 756  KCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXXXXAV 577
            KCK SKIRCSVIGLSAE++ICKHLCQETGG Y++ALDE HLK+L+LEH          A+
Sbjct: 208  KCKKSKIRCSVIGLSAEIFICKHLCQETGGSYYIALDESHLKDLILEHAPPPPAIAEFAI 267

Query: 576  ANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVSSPH 397
            ANLI MGFPQRAAE  ++ICSCHKEAKVG GYTCPRCKAR+CELPTEC ICGLTL+SSPH
Sbjct: 268  ANLIKMGFPQRAAESSVAICSCHKEAKVGDGYTCPRCKARVCELPTECRICGLTLISSPH 327

Query: 396  LARSYHHLFPIRPFDDVSPSALKD-LHKLPKNCFGCQLSLLNPGNFPGPQVACPNCKQHF 220
            LARSYHHLFPI PFD+VS S   D  +KLPK CFGCQ S+L PGN PG +VACP CKQHF
Sbjct: 328  LARSYHHLFPIVPFDEVSMSLYSDQQNKLPKACFGCQQSVLGPGNKPGLRVACPKCKQHF 387

Query: 219  CLDCDIYIHESLHNCPGCESLRNSK 145
            CLDCDIYIHESLHNCPGC+S R+SK
Sbjct: 388  CLDCDIYIHESLHNCPGCDSTRHSK 412


>ref|XP_006489788.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Citrus sinensis]
          Length = 424

 Score =  603 bits (1554), Expect = e-170
 Identities = 293/391 (74%), Positives = 323/391 (82%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWER+YAD+RSWE+LQEDESG LRPIDN  + HAQY               IQKGLIRYL
Sbjct: 29   AWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTAATARIQKGLIRYL 88

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI+ID SRAAAE+D++PSRM VVA+QVEAF+REFF QNPLSQI LV +KDGVA+CLTDLG
Sbjct: 89   YIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFYQNPLSQIGLVTVKDGVANCLTDLG 148

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSPE+HIKALMGKLG SGD+S+QN LDLV  LLNQIPSYGHREVLILYSALSTCDPGDI+
Sbjct: 149  GSPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPGDIM 208

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQKCK SKIRCSVIGLSAE++ICKHLCQETGG Y VALDE H KEL+LEH        
Sbjct: 209  ETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGTYSVALDESHSKELILEHAPPPPAIA 268

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A+A+LI MGFPQRA EG ISICSCHKE KVG GYTCPRCKAR+CELPTEC ICGL LV
Sbjct: 269  EFAIASLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTECRICGLQLV 328

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKDLHKLPKN-CFGCQLSLLNPGNFPGPQVACPNC 232
            SSPHLARSYHHLFPI PFD+ +PS L DLH + ++ CFGCQ SLL  GN  G  VACP C
Sbjct: 329  SSPHLARSYHHLFPIAPFDEATPSRLNDLHNISRSTCFGCQQSLLASGNKAGLCVACPKC 388

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTI 139
            K+HFCL+CDIYIHESLHNCPGCESLR S  +
Sbjct: 389  KKHFCLECDIYIHESLHNCPGCESLRQSNPV 419


>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
            sativus]
          Length = 423

 Score =  602 bits (1553), Expect = e-170
 Identities = 289/391 (73%), Positives = 324/391 (82%), Gaps = 7/391 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWERTYAD+RSWE+LQEDESGLLRPIDNK + HAQY               IQKGLIRYL
Sbjct: 27   AWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTARIQKGLIRYL 86

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI+IDFS+AA E+D++PSRM VVA+ V+AF+REFFDQNPLSQI LV +KDG A+CLTDLG
Sbjct: 87   YIVIDFSKAATEMDFRPSRMAVVAKHVDAFVREFFDQNPLSQIGLVTIKDGFANCLTDLG 146

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSPE+H+KALMGKL  SGDASLQNGL+LV   LNQIPSYGHREVL+LYSAL++CDPGDI+
Sbjct: 147  GSPESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSALNSCDPGDIM 206

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ET+QKCK SKIRCSVIGL+AE++IC+HLCQETGG Y VALDE H KEL+LEH        
Sbjct: 207  ETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGSYSVALDESHFKELLLEHAPPPPAIA 266

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A+ NLI MGFPQRAAE  I+ICSCHKEAKVGGGYTCPRCKAR+CELPTEC ICGLTL+
Sbjct: 267  DSAMPNLIKMGFPQRAAESSIAICSCHKEAKVGGGYTCPRCKARVCELPTECRICGLTLI 326

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKD-LHKLPKNCFGCQLSLLNP--GNFPGPQVACP 238
            SSPHLARSYHHLFPI PFD+VS     D  H+LPK CFGCQ SL+NP  GN P  +V+CP
Sbjct: 327  SSPHLARSYHHLFPIIPFDEVSDKVFHDPRHQLPKVCFGCQESLMNPSTGNSPSIRVSCP 386

Query: 237  NCKQHFCLDCDIYIHESLHNCPGCESLRNSK 145
             CKQHFCLDCDIYIHESLHNCPGCES R  K
Sbjct: 387  KCKQHFCLDCDIYIHESLHNCPGCESFRRPK 417


>ref|XP_006491820.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Citrus sinensis] gi|568877611|ref|XP_006491821.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X2 [Citrus sinensis]
            gi|568877613|ref|XP_006491822.1| PREDICTED: general
            transcription factor IIH subunit 2-like isoform X3
            [Citrus sinensis] gi|568877615|ref|XP_006491823.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X4 [Citrus sinensis]
          Length = 425

 Score =  602 bits (1552), Expect = e-169
 Identities = 292/391 (74%), Positives = 323/391 (82%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWER+YAD+RSWE+LQEDESG LRPIDN    HAQY               IQKGLIRYL
Sbjct: 30   AWERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLIRYL 89

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI+ID SRAAAE+D++PSRM VVA+QVEAF+REFFDQNPLSQI LV +KDGVA+CLTDLG
Sbjct: 90   YIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG 149

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSPEAHIK LMGKLG SGD+SLQN LDLV+ LL+QIPSYGHREVLILYSALSTCDPGDI+
Sbjct: 150  GSPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIM 209

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQKCK SKIRCSVIGLSAE++ICKHLCQ+TGG Y VALDE H KEL++EH        
Sbjct: 210  ETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELIMEHAPPPPAIA 269

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A+ANLI MGFPQRA EG ISICSCHKE KVG GYTCPRCKAR+CELPT+C ICGL LV
Sbjct: 270  EFAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTDCHICGLQLV 329

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKD-LHKLPKNCFGCQLSLLNPGNFPGPQVACPNC 232
            SSPHLARSYHHLFPI PFD+V+P  L D  ++    CFGCQ SLL+ GN PG  VACP C
Sbjct: 330  SSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLYVACPKC 389

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTI 139
            K+HFCL+CDIYIHESLHNCPGCESLR+S  I
Sbjct: 390  KKHFCLECDIYIHESLHNCPGCESLRHSNPI 420


>ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citrus clementina]
            gi|567871805|ref|XP_006428492.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
            gi|557530547|gb|ESR41730.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
            gi|557530549|gb|ESR41732.1| hypothetical protein
            CICLE_v10011800mg [Citrus clementina]
          Length = 425

 Score =  600 bits (1546), Expect = e-169
 Identities = 291/391 (74%), Positives = 323/391 (82%), Gaps = 5/391 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWER+YAD+RSWE+LQEDESG LRPIDN    HAQY               IQKGLIRYL
Sbjct: 30   AWERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLIRYL 89

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI+ID SRAAAE+D++PSRM VVA++VEAF+REFFDQNPLSQI LV +KDGVA+CLTDLG
Sbjct: 90   YIVIDLSRAAAEMDFRPSRMAVVAKRVEAFVREFFDQNPLSQIGLVTVKDGVANCLTDLG 149

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSPEAHIK LMGKLG SGD+SLQN LDLV+ LL+QIPSYGHREVLILYSALSTCDPGDI+
Sbjct: 150  GSPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPGDIM 209

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQKCK SKIRCSVIGLSAE++ICKHLCQ+TGG Y VALDE H KEL++EH        
Sbjct: 210  ETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGSYSVALDESHFKELIMEHAPPPPAIA 269

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A+ANLI MGFPQRA EG ISICSCHKE KVG GYTCPRCKAR+CELPT+C ICGL LV
Sbjct: 270  EFAIANLIKMGFPQRAGEGSISICSCHKEVKVGVGYTCPRCKARVCELPTDCHICGLQLV 329

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKD-LHKLPKNCFGCQLSLLNPGNFPGPQVACPNC 232
            SSPHLARSYHHLFPI PFD+V+P  L D  ++    CFGCQ SLL+ GN PG  VACP C
Sbjct: 330  SSPHLARSYHHLFPIAPFDEVTPLCLNDPRNRSRSTCFGCQQSLLSSGNKPGLCVACPKC 389

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTI 139
            K+HFCL+CDIYIHESLHNCPGCESLR+S  I
Sbjct: 390  KKHFCLECDIYIHESLHNCPGCESLRHSNPI 420


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2 [Glycine max]
          Length = 420

 Score =  589 bits (1518), Expect = e-165
 Identities = 277/392 (70%), Positives = 320/392 (81%), Gaps = 5/392 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWERTYA++RSWE+LQEDESGLLRPID   + HAQY               IQKGLIRYL
Sbjct: 26   AWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIRYL 85

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI++D S+AA+E D++PSRM V+ +QVEAFIREFFDQNPLS + LV +KDG+AHC+T+LG
Sbjct: 86   YIVVDLSKAASERDFRPSRMAVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCITELG 145

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSPE+HIKALMGKL  SGDASLQN L+LV   LNQIPSYGHREVLILYSALSTCDPGD++
Sbjct: 146  GSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPGDLM 205

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQKCK SKIRCSVIGL+AE+++CKHLCQETGG Y VALDE H KEL+LEH        
Sbjct: 206  ETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGTYSVALDESHFKELILEHAPPPPAIA 265

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A ANLI MGFPQR+AEG ++IC+CH+EAK GGGYTCPRCK R+CELPTEC +CGLTL+
Sbjct: 266  EYATANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLI 325

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKDL-HKLPKNCFGCQLSLLNPGNFPGPQVACPNC 232
            SSPHLARSYHHLFPI  FD+V+PS+  D  H  P  CFGCQ SLL+ GN PG  V CP C
Sbjct: 326  SSPHLARSYHHLFPIVMFDEVTPSSQNDSNHSFPNTCFGCQQSLLSQGNKPGLSVICPKC 385

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTIS 136
            KQ FCLDCDIY+HESLHNCPGCES R+SK+++
Sbjct: 386  KQQFCLDCDIYVHESLHNCPGCESSRHSKSVT 417


>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like isoform X1
            [Glycine max] gi|571487648|ref|XP_006590708.1| PREDICTED:
            general transcription factor IIH subunit 2-like isoform
            X2 [Glycine max] gi|571487650|ref|XP_006590709.1|
            PREDICTED: general transcription factor IIH subunit
            2-like isoform X3 [Glycine max]
            gi|571487652|ref|XP_006590710.1| PREDICTED: general
            transcription factor IIH subunit 2-like isoform X4
            [Glycine max] gi|571487654|ref|XP_006590711.1| PREDICTED:
            general transcription factor IIH subunit 2-like isoform
            X5 [Glycine max]
          Length = 419

 Score =  587 bits (1514), Expect = e-165
 Identities = 274/391 (70%), Positives = 318/391 (81%), Gaps = 4/391 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWERTYA++RSWE+LQEDESGLLRPID   + HAQY               IQKGLIRYL
Sbjct: 26   AWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLIRYL 85

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI++D S+AA+E D++PSRMVV+ +QVEAFIREFFDQNPLS + LV +KDG+AHC+T+LG
Sbjct: 86   YIVVDLSKAASERDFRPSRMVVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCITELG 145

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSPE+HIKALMGKL  SGDASLQN L+LV   LNQIPSYGHREVLILYSALSTCDPGD++
Sbjct: 146  GSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPGDLM 205

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQKCK SKIRCSVIGL+AE+++CKHLC+ETGG Y VALDE H KEL+LEH        
Sbjct: 206  ETIQKCKKSKIRCSVIGLAAEMFVCKHLCEETGGTYSVALDESHFKELILEHAPPPPAIA 265

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              + ANLI MGFPQR+AEG ++IC+CH+EAK GGGYTCPRCK R+CELPTEC +CGLTL+
Sbjct: 266  EYSTANLIKMGFPQRSAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRVCGLTLI 325

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKDLHKLPKNCFGCQLSLLNPGNFPGPQVACPNCK 229
            SSPHLARSYHHLFPI  FD+V+PS        P  CFGCQ SLL+ GN PG  V CP CK
Sbjct: 326  SSPHLARSYHHLFPIVMFDEVTPSQKDSSRSFPNTCFGCQQSLLSQGNKPGLSVICPKCK 385

Query: 228  QHFCLDCDIYIHESLHNCPGCESLRNSKTIS 136
            Q FCLDCDIY+HESLHNCPGCES R+SK+++
Sbjct: 386  QQFCLDCDIYVHESLHNCPGCESSRHSKSVT 416


>ref|XP_004493385.1| PREDICTED: general transcription factor IIH subunit 2-like [Cicer
            arietinum]
          Length = 422

 Score =  587 bits (1513), Expect = e-165
 Identities = 282/392 (71%), Positives = 317/392 (80%), Gaps = 5/392 (1%)
 Frame = -1

Query: 1296 AWERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYL 1129
            AWER Y ++RSWESLQEDESGLLRPID   + HAQY               IQKGLIRY+
Sbjct: 29   AWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALAATAATARIQKGLIRYM 88

Query: 1128 YIIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLG 949
            YI++D S+AA+E D++PSRM V+A+QVEAFIREFFDQNPLS + LV  KDGVA  LTDLG
Sbjct: 89   YIVVDLSKAASERDFRPSRMAVIAKQVEAFIREFFDQNPLSHVGLVTTKDGVAQSLTDLG 148

Query: 948  GSPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDIL 769
            GSPE+HIKALMGKL  SGDASLQN LDLV D LNQIPSYGHREVLILYSALSTCDPGD++
Sbjct: 149  GSPESHIKALMGKLECSGDASLQNALDLVHDNLNQIPSYGHREVLILYSALSTCDPGDLM 208

Query: 768  ETIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXX 589
            ETIQKCK SKIRCSVIGL+AE++ICKHLCQETGG Y VALDE H KEL+LEH        
Sbjct: 209  ETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGTYSVALDESHFKELILEHAPPPPAIA 268

Query: 588  XXAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLV 409
              A ANLI MGFPQRAAEG ++IC+CH+EAK GGGYTCPRCK R+CELPTEC ICGLTL+
Sbjct: 269  EYATANLIKMGFPQRAAEGSVAICTCHEEAKTGGGYTCPRCKVRVCELPTECRICGLTLI 328

Query: 408  SSPHLARSYHHLFPIRPFDDVSPSALKD-LHKLPKNCFGCQLSLLNPGNFPGPQVACPNC 232
            SSPHLARSYHHLFPI PF ++SPS+  D  H  P  CFGCQ SLL+ GN P   V+CP C
Sbjct: 329  SSPHLARSYHHLFPIVPFVEISPSSQNDPSHNFPNICFGCQESLLSHGNKPELSVSCPKC 388

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTIS 136
            KQ FCLDCDIYIHESLHNCPGCES R+SK+++
Sbjct: 389  KQQFCLDCDIYIHESLHNCPGCESFRHSKSVT 420


>ref|XP_002892263.1| ATGTF2H2/GTF2H2 [Arabidopsis lyrata subsp. lyrata]
            gi|297338105|gb|EFH68522.1| ATGTF2H2/GTF2H2 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 421

 Score =  586 bits (1511), Expect = e-165
 Identities = 283/396 (71%), Positives = 322/396 (81%), Gaps = 6/396 (1%)
 Frame = -1

Query: 1293 WERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYLY 1126
            WER Y D+RSWE LQEDESGLLRPIDN  + HAQY               IQKGLIRYLY
Sbjct: 26   WERAYVDDRSWEELQEDESGLLRPIDNSAIYHAQYRRRLRMLSAAAAGTRIQKGLIRYLY 85

Query: 1125 IIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLGG 946
            I+IDFSRAAAE+D++PSRM ++A+ VEAFIREFFDQNPLSQI LV +K+GVAH LTDLGG
Sbjct: 86   IVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREFFDQNPLSQIGLVSIKNGVAHTLTDLGG 145

Query: 945  SPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDILE 766
            SPE HIKALMGKL   GD+SLQN L+LV + LNQ+PSYGHREVLILYSAL TCDPGDI+E
Sbjct: 146  SPETHIKALMGKLEALGDSSLQNALELVHEHLNQVPSYGHREVLILYSALCTCDPGDIME 205

Query: 765  TIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXXX 586
            TIQKCK SK+RCSVIGLSAE++ICKHLCQETGG+Y VA+DE HLK+L+LEH         
Sbjct: 206  TIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLYSVAVDEVHLKDLLLEHAPPPPAIAE 265

Query: 585  XAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVS 406
             A+ANLI MGFPQRAAEG ++ICSCHKE K+G GY CPRCKAR+C+LPTEC ICGLTLVS
Sbjct: 266  FAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAGYMCPRCKARVCDLPTECTICGLTLVS 325

Query: 405  SPHLARSYHHLFPIRPFDDV-SPSALKD-LHKLPKNCFGCQLSLLNPGNFPGPQVACPNC 232
            SPHLARSYHHLFPI PFD+V + S+L D   KL K+CFGCQ SL+  GN PGP V C  C
Sbjct: 326  SPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQQSLIGAGNKPGPCVTCRKC 385

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTISDMDE 124
            K +FCLDCDIYIHESLHNCPGCES+   K++S M+E
Sbjct: 386  KHYFCLDCDIYIHESLHNCPGCESIHRPKSVSLMEE 421


>ref|XP_006418067.1| hypothetical protein EUTSA_v10007730mg [Eutrema salsugineum]
            gi|557095838|gb|ESQ36420.1| hypothetical protein
            EUTSA_v10007730mg [Eutrema salsugineum]
          Length = 421

 Score =  584 bits (1506), Expect = e-164
 Identities = 285/396 (71%), Positives = 323/396 (81%), Gaps = 6/396 (1%)
 Frame = -1

Query: 1293 WERTYADERSWESLQEDESGLLRPIDNKTLSHAQYXXXXXXXXXXR----IQKGLIRYLY 1126
            WER Y D+RSWE+LQEDESGLLRPIDN  + HAQY               IQKGLIRYLY
Sbjct: 26   WERAYVDDRSWEALQEDESGLLRPIDNSAIYHAQYRRRLRILSAAAAGTRIQKGLIRYLY 85

Query: 1125 IIIDFSRAAAELDYKPSRMVVVARQVEAFIREFFDQNPLSQISLVILKDGVAHCLTDLGG 946
            I+IDFSRAAAE D++PSRM ++A+ VEAFIREFFDQNPLSQI LV +K+GVAH LTDLGG
Sbjct: 86   IVIDFSRAAAETDFRPSRMAIMAKHVEAFIREFFDQNPLSQIGLVSIKNGVAHTLTDLGG 145

Query: 945  SPEAHIKALMGKLGTSGDASLQNGLDLVRDLLNQIPSYGHREVLILYSALSTCDPGDILE 766
            SPE+HI+ALMGKL   GD+SLQN L+LV + LNQ+PSYGHREVLILYSAL TCDPGDI+E
Sbjct: 146  SPESHIQALMGKLEALGDSSLQNALELVHEHLNQVPSYGHREVLILYSALCTCDPGDIME 205

Query: 765  TIQKCKASKIRCSVIGLSAELYICKHLCQETGGMYFVALDEPHLKELVLEHXXXXXXXXX 586
            TIQKCK SK+RCSVIGLSAE++ICKHLCQETGG+Y VA+DE HLK+L+LEH         
Sbjct: 206  TIQKCKKSKLRCSVIGLSAEMFICKHLCQETGGLYSVAVDEVHLKDLLLEHAPPPPAIAE 265

Query: 585  XAVANLIMMGFPQRAAEGVISICSCHKEAKVGGGYTCPRCKARICELPTECCICGLTLVS 406
             AVANLI MGFPQRAAEG ++ICSCHK+ K+G GYTCPRCKAR+CELPTEC ICGLTLVS
Sbjct: 266  FAVANLIKMGFPQRAAEGSMAICSCHKDVKIGAGYTCPRCKARVCELPTECTICGLTLVS 325

Query: 405  SPHLARSYHHLFPIRPFDDV-SPSALKD-LHKLPKNCFGCQLSLLNPGNFPGPQVACPNC 232
            SPHLARSYHHLFPI PFD+V + S+L D   KL K CFGCQ SLL  GN  G  V C NC
Sbjct: 326  SPHLARSYHHLFPIAPFDEVPTLSSLNDSRRKLGKCCFGCQQSLLGAGNKQGACVTCRNC 385

Query: 231  KQHFCLDCDIYIHESLHNCPGCESLRNSKTISDMDE 124
            K +FCLDCDIYIHESLHNCPGCES+R  K++S M+E
Sbjct: 386  KHYFCLDCDIYIHESLHNCPGCESIRRPKSVSLMEE 421