BLASTX nr result
ID: Atropa21_contig00026438
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00026438
(839 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein A... 73 1e-10
ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein A... 73 1e-10
ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein A... 49 2e-09
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A... 69 2e-09
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A... 69 2e-09
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588... 68 5e-09
ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein A... 52 8e-09
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A... 64 5e-08
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A... 64 5e-08
ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein A... 64 9e-08
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A... 64 9e-08
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A... 62 3e-07
ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein A... 45 5e-07
emb|CAN82584.1| hypothetical protein VITISV_031018 [Vitis vinifera] 59 3e-06
emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera] 59 3e-06
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597... 58 5e-06
>ref|XP_006347119.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 450
Score = 73.2 bits (178), Expect = 1e-10
Identities = 64/195 (32%), Positives = 86/195 (44%), Gaps = 7/195 (3%)
Frame = +2
Query: 266 LMLKKDGLFWKANKKVLLL*IRI*RTQY*SVQE*K-WP*KMICKTSVPTKVTCFGWLMSL 442
L +D L+WK N + R S Q+ WP K + K +P KV+CF WL++
Sbjct: 250 LQAYEDMLWWKGNNRGEFKVHSAYRLMDESSQQSPIWPWKQVWKCRIPHKVSCFIWLLAK 309
Query: 443 EACLTQEKLMKMAFSIFFLMKMGWILCSRCCLY-EIM*IHGSYFCAL*VYLAVMDHIHG* 619
EA LTQ+ +MK G LCSRC L E + F ++ +
Sbjct: 310 EAALTQDN----------VMKRGITLCSRCFLCGETLETVNHLF----LHCKYTRQLWRI 355
Query: 620 FWHPMGKSYEVQERVRE----WEYCMSRSILKETWRANPLCIAWTIWK*INKRCCEG-KR 784
F G S+ + RV E WE + + + WR P I W IWK N RC EG +
Sbjct: 356 FLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIEN 415
Query: 785 SG*SVKYNCLHYLYF 829
S VK NC+ L F
Sbjct: 416 SVQDVKLNCILLLCF 430
>ref|XP_006337991.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 556
Score = 73.2 bits (178), Expect = 1e-10
Identities = 64/195 (32%), Positives = 86/195 (44%), Gaps = 7/195 (3%)
Frame = +2
Query: 266 LMLKKDGLFWKANKKVLLL*IRI*RTQY*SVQE*K-WP*KMICKTSVPTKVTCFGWLMSL 442
L +D L+WK N + R S Q+ WP K + K +P KV+CF WL++
Sbjct: 356 LQAYEDMLWWKGNNRGEFKVHSAYRLMDESSQQSPIWPWKQVWKCRIPHKVSCFIWLLAK 415
Query: 443 EACLTQEKLMKMAFSIFFLMKMGWILCSRCCLY-EIM*IHGSYFCAL*VYLAVMDHIHG* 619
EA LTQ+ +MK G LCSRC L E + F ++ +
Sbjct: 416 EAALTQDN----------VMKRGITLCSRCFLCGETLETVNHLF----LHCKYTRQLWRI 461
Query: 620 FWHPMGKSYEVQERVRE----WEYCMSRSILKETWRANPLCIAWTIWK*INKRCCEG-KR 784
F G S+ + RV E WE + + + WR P I W IWK N RC EG +
Sbjct: 462 FLSLKGISWTMPRRVTEALYSWEEAGALAKDRTRWRIIPASIWWAIWKERNSRCFEGIEN 521
Query: 785 SG*SVKYNCLHYLYF 829
S VK NC+ L F
Sbjct: 522 SVQDVKLNCILLLCF 536
>ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 514
Score = 48.5 bits (114), Expect(2) = 2e-09
Identities = 25/56 (44%), Positives = 29/56 (51%)
Frame = +2
Query: 371 WP*KMICKTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCL 538
WP K I K P KV CF WL+ +ACLT +KL + F LCSRC L
Sbjct: 383 WPWKEIWKARAPFKVVCFTWLVVWKACLTHDKLQRRGFH----------LCSRCFL 428
Score = 40.4 bits (93), Expect(2) = 2e-09
Identities = 26/92 (28%), Positives = 38/92 (41%)
Frame = +3
Query: 519 CAAGAACMRSCESMDHIFVHYEFTWQLWIIFMVNFGIQWASPMKFRNGLESGNTACPEAF 698
C+ C + E+ H+F+H FT QLW +F I W E
Sbjct: 423 CSRCFLCHQEAETNGHLFLHCSFTRQLWQLFAALAQIAW------------------EKL 464
Query: 699 LKKPGELILYA*LGLYGNK*IRDVVKEKGVAS 794
+K G L A G +G + ++DV+K V S
Sbjct: 465 VKSGGRLFQLAYSGQFGKRGMQDVLKAGAVQS 496
>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 399
Score = 68.9 bits (167), Expect = 2e-09
Identities = 59/197 (29%), Positives = 84/197 (42%), Gaps = 9/197 (4%)
Frame = +2
Query: 266 LMLKKDGLFWKANKK-VLLL*IRI*RTQY*SVQE*KWP*KMICKTSVPTKVTCFGWLMSL 442
L ++D L+WK + K + + + S Q WP + I K +P KV+CF WL++
Sbjct: 199 LQAEEDALWWKGSSKGIFKVGAAYRLMEQPSQQIPIWPWRQIWKGRIPYKVSCFIWLLAK 258
Query: 443 EACLTQEKLMKMAFSIFFLMKMGWILCSRCCL-------YEIM*IHGSYFCAL*VYLAVM 601
EA LTQ+ +MK G LCSRC L + +H + L V
Sbjct: 259 EAALTQDN----------VMKRGITLCSRCFLCGETSETVNHLFLHCKFTQQL---WRVF 305
Query: 602 DHIHG*FWHPMGKSYEVQERVREWEYCMSRSILKETWRANPLCIAWTIWK*INKRCCEG- 778
+ G W + E ++ WE + + WR P I W WK N RC E
Sbjct: 306 LSLKGISW---AMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWATWKERNSRCFESV 362
Query: 779 KRSG*SVKYNCLHYLYF 829
+ S VK NC+ L F
Sbjct: 363 ENSMQKVKLNCILLLCF 379
>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 323
Score = 68.9 bits (167), Expect = 2e-09
Identities = 59/197 (29%), Positives = 84/197 (42%), Gaps = 9/197 (4%)
Frame = +2
Query: 266 LMLKKDGLFWKANKK-VLLL*IRI*RTQY*SVQE*KWP*KMICKTSVPTKVTCFGWLMSL 442
L ++D L+WK + K + + + S Q WP + I K +P KV+CF WL++
Sbjct: 123 LQAEEDALWWKGSSKGIFKVGAAYRLMEQPSQQIPIWPWRQIWKGRIPYKVSCFIWLLAK 182
Query: 443 EACLTQEKLMKMAFSIFFLMKMGWILCSRCCL-------YEIM*IHGSYFCAL*VYLAVM 601
EA LTQ+ +MK G LCSRC L + +H + L V
Sbjct: 183 EAALTQDN----------VMKRGITLCSRCFLCGETSETVNHLFLHCKFTQQL---WRVF 229
Query: 602 DHIHG*FWHPMGKSYEVQERVREWEYCMSRSILKETWRANPLCIAWTIWK*INKRCCEG- 778
+ G W + E ++ WE + + WR P I W WK N RC E
Sbjct: 230 LSLKGISW---AMPRRITEALKSWEEAGVLAKDRTRWRIIPASIWWATWKERNSRCFESV 286
Query: 779 KRSG*SVKYNCLHYLYF 829
+ S VK NC+ L F
Sbjct: 287 ENSMQKVKLNCILLLCF 303
>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
Length = 255
Score = 67.8 bits (164), Expect = 5e-09
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 7/163 (4%)
Frame = +2
Query: 362 E*KWP*KMICKTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCLY 541
E +WP K+I K +P KV+ F WL +ACLT E + + I CSRC +
Sbjct: 87 EMEWPWKLIWKIKIPHKVSGFTWLAIRKACLTHEVIQRRGIQI----------CSRCFMC 136
Query: 542 -EIM*IHGSYFCAL*VYLAVMDHIHG*FWHPMGKSYEVQ----ERVREWEYCMSRSILKE 706
E ++ F ++ ++ F +G ++ + E +R+WE R KE
Sbjct: 137 GEEAEVNSHLF----LHCRTAANLWNMFLCILGVNWVMPKTTLELLRQWEGVGRRRRSKE 192
Query: 707 T-WRANPLCIAWTIWK*INKRCCEGK-RSG*SVKYNCLHYLYF 829
W+ P CI WT+WK N+R +GK S +K N L LYF
Sbjct: 193 DWWKCIPACIWWTLWKERNERSHDGKLNSTQKIKMNSLSLLYF 235
>ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 330
Score = 51.6 bits (122), Expect(2) = 8e-09
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +2
Query: 266 LMLKKDGLFWKANKK-VLLL*IRI*RTQY*SVQE*KWP*KMICKTSVPTKVTCFGWLMSL 442
L ++D L+WK + K + + + S Q WP + I K +P KV+CF WL++
Sbjct: 217 LQAEEDALWWKGSSKGIFKVGAAYRLMEQPSQQIPIWPWRQIWKGRIPYKVSCFIWLLAK 276
Query: 443 EACLTQEKLMKMAFSIFFLMKMGWILCSRCCL 538
EA LTQ+ +MK G LCSRC L
Sbjct: 277 EAALTQDN----------VMKRGITLCSRCFL 298
Score = 35.4 bits (80), Expect(2) = 8e-09
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 519 CAAGAACMRSCESMDHIFVHYEFTWQLWIIFMVNFGI 629
C+ C + E+++H+F+H +FT QLW +F+ GI
Sbjct: 293 CSRCFLCGETSETVNHLFLHCKFTQQLWRVFLSLKGI 329
>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 217
Score = 64.3 bits (155), Expect = 5e-08
Identities = 49/155 (31%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Frame = +2
Query: 371 WP*KMICKTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCC-LYEI 547
WP +MI +T +P KV F WL++ +A LT E L K ++ + LC
Sbjct: 53 WPWRMIWRTEIPYKVNYFTWLLAKQAVLTHENLNKRKPNL----RSSCYLCEEQVETVNH 108
Query: 548 M*IHGSYFCAL*VYLAVMDHIHG*FWHPMGKSYEVQERVREWEYCMSRSILKETWRANPL 727
+ +H + L I W G EV ++ W + ++ WR P
Sbjct: 109 LFLHCKWTDQLWQMFIQKRKIK---WTKPGSIIEV---LQCWNRDGNAGKNEKRWRIVPA 162
Query: 728 CIAWTIWK*INKRCCEGKRSG-*SVKYNCLHYLYF 829
CI WTIWK N+RC EGK++ +K NCL YF
Sbjct: 163 CIWWTIWKERNQRCFEGKQNNIQKIKTNCLGLYYF 197
>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Solanum tuberosum]
Length = 284
Score = 64.3 bits (155), Expect = 5e-08
Identities = 50/151 (33%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Frame = +2
Query: 392 KTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCLYEIM*IHGSYF 571
K +PTKV CF WL+ ACLTQE L K G L RC L + S+
Sbjct: 127 KGDIPTKVKCFTWLVIKRACLTQE----------VLQKKGRQLVPRCFLCNLTSETNSHL 176
Query: 572 CAL*VYLAVMDHIHG*FWHPMGKSYEVQER----VREWEYCMSRSILKETWRANPLCIAW 739
Y A I F + ++ + ER ++ W S K WR P CI W
Sbjct: 177 FLHCNYTA---QIWNLFLNISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWW 233
Query: 740 TIWK*INKRCCEGK-RSG*SVKYNCLHYLYF 829
++WK N RC + + S VK+NC+ L F
Sbjct: 234 SVWKERNSRCFDNRSNSIHKVKWNCIVSLLF 264
>ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 397
Score = 63.5 bits (153), Expect = 9e-08
Identities = 51/152 (33%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Frame = +2
Query: 374 P*KMICKTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCLYEIM* 553
P K+I K +P KV F WL+ EA LTQE LMK G +C RCC E +
Sbjct: 234 PWKLIWKVKIPYKVVVFTWLVVKEAVLTQEN----------LMKRGIQMCPRCCFCEQV- 282
Query: 554 IHGSYFCAL*VYLAVMDHIHG*FWHPMGKSYEVQER----VREWEYCMSRSILKETWRAN 721
L ++ V+ + F G S+ V R + W S S K W+
Sbjct: 283 --AETINHLFLHCKVVGKLWNLFTSFRGISWTVPGRTGQALESWNMEGSGSTDKSRWKIV 340
Query: 722 PLCIAWTIWK*INKRCCEGKRSG-*SVKYNCL 814
P I WTIWK N R + K S +K NC+
Sbjct: 341 PAVIWWTIWKERNSRNFDNKSSPLHKIKMNCI 372
>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 517
Score = 63.5 bits (153), Expect = 9e-08
Identities = 50/151 (33%), Positives = 65/151 (43%), Gaps = 5/151 (3%)
Frame = +2
Query: 392 KTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCLYEIM*IHGSYF 571
K +PTKV CF WL+ ACLTQE L K G L RC L + S+
Sbjct: 360 KGDIPTKVKCFTWLVIKRACLTQE----------VLQKKGRQLVPRCFLCNLTSETNSHL 409
Query: 572 CAL*VYLAVMDHIHG*FWHPMGKSYEVQER----VREWEYCMSRSILKETWRANPLCIAW 739
Y A I F ++ + ER ++ W S K WR P CI W
Sbjct: 410 FLHCNYTA---QIWNLFLSISNLNWTMPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWW 466
Query: 740 TIWK*INKRCCEGK-RSG*SVKYNCLHYLYF 829
++WK N RC + + S VK+NC+ L F
Sbjct: 467 SVWKERNNRCFDNRSNSIHKVKWNCIVSLLF 497
>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Solanum tuberosum]
Length = 284
Score = 62.0 bits (149), Expect = 3e-07
Identities = 49/151 (32%), Positives = 64/151 (42%), Gaps = 5/151 (3%)
Frame = +2
Query: 392 KTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCLYEIM*IHGSYF 571
K +PTKV CF WL+ ACLTQE L K G L RC L + S+
Sbjct: 127 KGDIPTKVKCFTWLVIKRACLTQE----------VLQKKGRQLVPRCFLCNLTSETNSHL 176
Query: 572 CAL*VYLAVMDHIHG*FWHPMGKSYEVQER----VREWEYCMSRSILKETWRANPLCIAW 739
Y A I F ++ + ER ++ W K WR P CI W
Sbjct: 177 FLHCNYTA---QIWNLFLSISNLNWTMPERTSNVLKSWVRRGGTKSQKRWWRLIPSCIWW 233
Query: 740 TIWK*INKRCCEGK-RSG*SVKYNCLHYLYF 829
++WK N RC + + S VK+NC+ L F
Sbjct: 234 SVWKERNSRCFDNRSNSIHKVKWNCIVSLLF 264
>ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 258
Score = 44.7 bits (104), Expect(2) = 5e-07
Identities = 25/57 (43%), Positives = 29/57 (50%)
Frame = +2
Query: 374 P*KMICKTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCLYE 544
P K+I K +P KV F WL+ EA LTQE LMK G +C RCC E
Sbjct: 171 PWKLIWKVKIPYKVVVFTWLVVKEAVLTQEN----------LMKRGIQMCPRCCFCE 217
Score = 36.2 bits (82), Expect(2) = 5e-07
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +3
Query: 519 CAAGAACMRSCESMDHIFVHYEFTWQLWIIFMVNFGIQWASPMKFRNGL 665
C C + E+++H+F+H + QLW +F GI W P + R+ L
Sbjct: 210 CPRCCFCEQVAETINHLFLHCKVVGQLWNLFTSFRGISWTVPGENRDRL 258
>emb|CAN82584.1| hypothetical protein VITISV_031018 [Vitis vinifera]
Length = 555
Score = 58.5 bits (140), Expect = 3e-06
Identities = 40/130 (30%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Frame = +2
Query: 401 VPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCLY---EIM*IHGSYF 571
VP+KV+ F W S E LTQ++L + GWIL +RCCL E H
Sbjct: 398 VPSKVSFFAWEASWEKVLTQDQLKRR----------GWILANRCCLCCVDEESTNHILVH 447
Query: 572 CAL*VYLAVMDHIHG*FWHPMGKSYEVQERVREWEYCMSRSILKETWRANPLCIAWTIWK 751
C+ L D + F + V++ + W ++ WRA PLC+ WT+WK
Sbjct: 448 CSKTKIL--WDLVFSLFGVNWVLPFSVKDTLLSWHVSFKDKNHRKVWRAAPLCLFWTVWK 505
Query: 752 *INKRCCEGK 781
N+ + K
Sbjct: 506 ERNRIVFDNK 515
>emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera]
Length = 2077
Score = 58.5 bits (140), Expect = 3e-06
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 3/134 (2%)
Frame = +2
Query: 371 WP*KMICKTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCLY--- 541
+P +I VP+KV+ F W S E LTQ++L + GWIL +RCCL
Sbjct: 1910 FPGNIIWSPYVPSKVSFFAWEASWEKVLTQDQLKRR----------GWILANRCCLCCVE 1959
Query: 542 EIM*IHGSYFCAL*VYLAVMDHIHG*FWHPMGKSYEVQERVREWEYCMSRSILKETWRAN 721
E H C+ L D + F + V++ + W ++ WRA
Sbjct: 1960 EETINHILVHCSKTKIL--WDLLLSLFGVNWVMPFSVRDTLLSWYVSFKDKNHRKVWRAA 2017
Query: 722 PLCIAWTIWK*INK 763
PLC+ WTIWK N+
Sbjct: 2018 PLCLFWTIWKERNR 2031
>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
Length = 305
Score = 57.8 bits (138), Expect = 5e-06
Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 13/165 (7%)
Frame = +2
Query: 371 WP*KMICKTSVPTKVTCFGWLMSLEACLTQEKLMKMAFSIFFLMKMGWILCSRCCLYEIM 550
WP K+I +T +P KV F W+ EACLTQ+ + K +RC
Sbjct: 138 WPWKLIWRTKLPPKVVFFTWIALYEACLTQDNIKKRKIQ----------FPNRC------ 181
Query: 551 *IHGSYFCA--------L*VYLAVMDHIHG*FWHPMGKSY----EVQERVREWEYCMSRS 694
Y C L ++ V + F+ G ++ V++ W
Sbjct: 182 -----YMCKKEAETPRHLLLHCEVASELWSMFFCLSGINWTTPLTVKDAYESWSLWKVDK 236
Query: 695 ILKETWRANPLCIAWTIWK*INKRCCEGKRSG*SV-KYNCLHYLY 826
+K+ W P CI W+IW NKRC +G+ + + K C L+
Sbjct: 237 AIKKIWIMIPACIFWSIWLERNKRCFDGESTALGILKTRCTENLF 281