BLASTX nr result
ID: Atropa21_contig00026427
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00026427
(497 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006344284.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_004237212.1| PREDICTED: pentatricopeptide repeat-containi... 115 8e-24
gb|EOY02035.1| Pentatricopeptide repeat (PPR) superfamily protei... 88 1e-15
ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera] 87 3e-15
gb|EMJ26028.1| hypothetical protein PRUPE_ppa023452mg [Prunus pe... 75 7e-12
gb|EXB63826.1| hypothetical protein L484_021099 [Morus notabilis] 75 9e-12
ref|XP_003519768.2| PREDICTED: pentatricopeptide repeat-containi... 75 9e-12
ref|XP_006483222.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
ref|XP_006438631.1| hypothetical protein CICLE_v10033863mg, part... 74 2e-11
ref|XP_006842143.1| hypothetical protein AMTR_s00078p00125150 [A... 74 3e-11
gb|EPS69572.1| hypothetical protein M569_05194, partial [Genlise... 71 2e-10
ref|XP_003613604.1| Pentatricopeptide repeat-containing protein ... 70 2e-10
gb|ABK28160.1| unknown [Arabidopsis thaliana] 70 3e-10
gb|ABE65422.1| pentatricopeptide repeat-containing protein [Arab... 70 3e-10
ref|NP_178378.1| pentatricopeptide repeat-containing protein [Ar... 70 3e-10
gb|ESW29677.1| hypothetical protein PHAVU_002G089500g [Phaseolus... 68 1e-09
ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat... 68 1e-09
ref|XP_006290425.1| hypothetical protein CARUB_v10019221mg [Caps... 68 1e-09
ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t... 68 1e-09
>ref|XP_006344284.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Solanum tuberosum]
Length = 615
Score = 117 bits (294), Expect = 1e-24
Identities = 57/58 (98%), Positives = 57/58 (98%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 324
EEMTKKLSELEPENPVP VILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT
Sbjct: 558 EEMTKKLSELEPENPVPFVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 615
>ref|XP_004237212.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Solanum lycopersicum]
Length = 615
Score = 115 bits (287), Expect = 8e-24
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 324
EEMT+KLSELEPENPVP VILSNLYARQGRWDDAERIRETIDERGL+KLPGYSTVGVT
Sbjct: 558 EEMTQKLSELEPENPVPFVILSNLYARQGRWDDAERIRETIDERGLDKLPGYSTVGVT 615
>gb|EOY02035.1| Pentatricopeptide repeat (PPR) superfamily protein, putative
[Theobroma cacao]
Length = 618
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/58 (68%), Positives = 47/58 (81%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 324
EEM KLSELEPENP P VILS++YA GRW DAERIR+ ID+RGL K PG+S++ VT
Sbjct: 561 EEMAMKLSELEPENPAPFVILSDIYAAVGRWGDAERIRQVIDDRGLRKFPGFSSIAVT 618
>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
protein product [Vitis vinifera]
Length = 617
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 324
EEM KKLSELEP++P P VILSN+YA QGRW D ER+RE +++RGL+K PG S++GVT
Sbjct: 560 EEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKPPGCSSIGVT 617
>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/58 (67%), Positives = 49/58 (84%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 324
EEM KKLSELEP++P P VILSN+YA QGRW D ER+RE +++RGL+K PG S++GVT
Sbjct: 620 EEMAKKLSELEPQDPTPFVILSNIYAVQGRWGDVERVREMMNDRGLKKPPGCSSIGVT 677
>gb|EMJ26028.1| hypothetical protein PRUPE_ppa023452mg [Prunus persica]
Length = 619
Score = 75.5 bits (184), Expect = 7e-12
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYS 339
+EM KLSELEPENP P VILS +YA GRW+DAE+IRE ++++ L KLPG+S
Sbjct: 560 KEMAIKLSELEPENPTPFVILSKIYAALGRWEDAEKIRELMNDKTLRKLPGFS 612
>gb|EXB63826.1| hypothetical protein L484_021099 [Morus notabilis]
Length = 619
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 324
EEM KKL ELEPE+P+P V+LSN+YA GRW D ER+R ++ +G K PGYS + V+
Sbjct: 562 EEMAKKLLELEPESPIPYVVLSNIYAELGRWKDVERVRGMMNHKGHRKAPGYSFIEVS 619
>ref|XP_003519768.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Glycine max]
Length = 637
Score = 75.1 bits (183), Expect = 9e-12
Identities = 33/55 (60%), Positives = 43/55 (78%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTV 333
EEM KKL ++EPENP PLV+LSN+YA GRW + ERIR I ++GL+KL G+S +
Sbjct: 580 EEMAKKLLDVEPENPAPLVVLSNIYAGLGRWKEVERIRGVITDKGLDKLSGFSMI 634
>ref|XP_006483222.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02750-like [Citrus sinensis]
Length = 618
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 324
EEM KL E+EPENP P VILSN+YA GRW+D RIR+ I++R L KLPG S G+T
Sbjct: 562 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS-AGIT 618
>ref|XP_006438631.1| hypothetical protein CICLE_v10033863mg, partial [Citrus clementina]
gi|557540827|gb|ESR51871.1| hypothetical protein
CICLE_v10033863mg, partial [Citrus clementina]
Length = 592
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 324
EEM KL E+EPENP P VILSN+YA GRW+D RIR+ I++R L KLPG S G+T
Sbjct: 536 EEMAMKLQEMEPENPTPFVILSNIYAGLGRWEDVGRIRQMINDRQLTKLPGIS-AGIT 592
>ref|XP_006842143.1| hypothetical protein AMTR_s00078p00125150 [Amborella trichopoda]
gi|548844192|gb|ERN03818.1| hypothetical protein
AMTR_s00078p00125150 [Amborella trichopoda]
Length = 536
Score = 73.6 bits (179), Expect = 3e-11
Identities = 34/57 (59%), Positives = 42/57 (73%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGV 327
EEM L ELEPENP P+V+LSN+YA GRW AE RE + ERGL+K+PG S +G+
Sbjct: 478 EEMADILFELEPENPAPVVVLSNIYANLGRWGSAENAREMMRERGLKKVPGRSWIGL 534
>gb|EPS69572.1| hypothetical protein M569_05194, partial [Genlisea aurea]
Length = 565
Score = 70.9 bits (172), Expect = 2e-10
Identities = 30/57 (52%), Positives = 43/57 (75%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGV 327
EEM +++ ELEPENP+P VILSN+YA Q +W D R+ +D++GL+K PG S++ V
Sbjct: 509 EEMARRVVELEPENPIPFVILSNIYAGQDKWKDVVETRKALDQKGLKKQPGLSSIVV 565
>ref|XP_003613604.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514939|gb|AES96562.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 620
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGVT 324
EEM KL ++EP+NP PLV+LSN+YA GRW + ERIR I ++GL+K G S + VT
Sbjct: 563 EEMAMKLIDIEPKNPAPLVVLSNIYAALGRWSEVERIRGLITDKGLDKNSGISMIEVT 620
>gb|ABK28160.1| unknown [Arabidopsis thaliana]
Length = 614
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVG 330
EE KL+ELEPENP P VILS++YA RW+D E IR+ ID++ L KLPG S G
Sbjct: 558 EEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLSG 613
>gb|ABE65422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVG 330
EE KL+ELEPENP P VILS++YA RW+D E IR+ ID++ L KLPG S G
Sbjct: 558 EEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLSG 613
>ref|NP_178378.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546778|sp|Q1PFA6.2|PP144_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02750 gi|2947066|gb|AAC05347.1| hypothetical protein
[Arabidopsis thaliana] gi|330250526|gb|AEC05620.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 613
Score = 70.1 bits (170), Expect = 3e-10
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVG 330
EE KL+ELEPENP P VILS++YA RW+D E IR+ ID++ L KLPG S G
Sbjct: 558 EEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSLSG 613
>gb|ESW29677.1| hypothetical protein PHAVU_002G089500g [Phaseolus vulgaris]
Length = 628
Score = 68.2 bits (165), Expect = 1e-09
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYS 339
EEM +L ++EPENP PLV+LSN+YA GRW + ER+R I ++GL+KL G S
Sbjct: 569 EEMAMRLLDIEPENPTPLVVLSNIYAGLGRWKEVERVRGMITDKGLDKLCGLS 621
>ref|XP_004487107.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like isoform X1 [Cicer arietinum]
gi|502082246|ref|XP_004487108.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g08820-like isoform X2 [Cicer arietinum]
Length = 668
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGV 327
E + K+L ELEP N V+LSN+Y+ RWD+AE+IR T++E+G++KLPGYS V V
Sbjct: 485 EHVLKQLIELEPWNSGHYVLLSNIYSANSRWDEAEKIRSTLNEKGMQKLPGYSWVEV 541
>ref|XP_006290425.1| hypothetical protein CARUB_v10019221mg [Capsella rubella]
gi|482559132|gb|EOA23323.1| hypothetical protein
CARUB_v10019221mg [Capsella rubella]
Length = 611
Score = 67.8 bits (164), Expect = 1e-09
Identities = 32/56 (57%), Positives = 38/56 (67%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVG 330
EE KL+ELEPENP P VILS++YA RW D E IR+ ID++ L K PG S G
Sbjct: 556 EEAAMKLAELEPENPAPFVILSSIYAALERWQDVESIRQVIDQKQLVKFPGLSLSG 611
>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 678
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/57 (54%), Positives = 43/57 (75%)
Frame = -1
Query: 497 EEMTKKLSELEPENPVPLVILSNLYARQGRWDDAERIRETIDERGLEKLPGYSTVGV 327
E + K+L ELEP N V+LSN+Y+ RWD+AE+IR T++E+G++KLPGYS V V
Sbjct: 495 EHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEV 551