BLASTX nr result
ID: Atropa21_contig00026317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00026317
(662 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein A... 64 2e-11
ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein A... 59 1e-08
ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein A... 59 1e-08
ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein A... 59 1e-08
ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597... 51 2e-08
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A... 63 9e-08
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A... 63 9e-08
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A... 62 2e-07
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588... 61 3e-07
ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein A... 50 2e-06
ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein A... 48 2e-06
emb|CAN75353.1| hypothetical protein VITISV_030454 [Vitis vinifera] 47 4e-06
>ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 514
Score = 63.9 bits (154), Expect(2) = 2e-11
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = -3
Query: 402 ENLLSPWPWKQISRSKAPFQVVFFSRFCM-KNLVSLMKISKKEVLICSKRVLCGRHSESI 226
E PWPWK+I +++APF+VV F+ + K ++ K+ ++ +CS+ LC + +E+
Sbjct: 377 EQFNDPWPWKEIWKARAPFKVVCFTWLVVWKACLTHDKLQRRGFHLCSRCFLCHQEAETN 436
Query: 225 CHMFLHWYTTMQLWQLY 175
H+FLH T QLWQL+
Sbjct: 437 GHLFLHCSFTRQLWQLF 453
Score = 31.2 bits (69), Expect(2) = 2e-11
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1
Query: 557 WSINLRRNFND*EANKDVDFFDLLKHILVDN*YRRQDNIRWIPSNKASFTVRRTY 393
W+I RR ND E + D F L+ +D++ WI KA F+V+ Y
Sbjct: 318 WNIVFRRLLNDWEIPRVTDLFGKLEGF--SGLKEEEDSLTWIGGTKAVFSVKIAY 370
>ref|XP_006355601.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 399
Score = 58.5 bits (140), Expect(2) = 1e-08
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -3
Query: 384 WPWKQISRSKAPFQVVFFSRFCMKNLVSLM-KISKKEVLICSKRVLCGRHSESICHMFLH 208
WPW+QI + + P++V F K + K+ + +CS+ LCG SE++ H+FLH
Sbjct: 235 WPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNHLFLH 294
Query: 207 WYTTMQLWQLY 175
T QLW+++
Sbjct: 295 CKFTQQLWRVF 305
Score = 26.9 bits (58), Expect(2) = 1e-08
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 557 WSINLRRNFND*EANKDVDFFDLLKHILVDN*YRRQDNIRWIPSNKASFTVRRTY 393
W+ RR+ ND E + +F +++ + + +D + W S+K F V Y
Sbjct: 170 WNFQFRRHLNDWEVMRVAEFLNIVGNF--NGLQAEEDALWWKGSSKGIFKVGAAY 222
>ref|XP_006356729.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 330
Score = 58.5 bits (140), Expect(2) = 1e-08
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -3
Query: 384 WPWKQISRSKAPFQVVFFSRFCMKNLVSLM-KISKKEVLICSKRVLCGRHSESICHMFLH 208
WPW+QI + + P++V F K + K+ + +CS+ LCG SE++ H+FLH
Sbjct: 253 WPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNHLFLH 312
Query: 207 WYTTMQLWQLY 175
T QLW+++
Sbjct: 313 CKFTQQLWRVF 323
Score = 26.9 bits (58), Expect(2) = 1e-08
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 557 WSINLRRNFND*EANKDVDFFDLLKHILVDN*YRRQDNIRWIPSNKASFTVRRTY 393
W+ RR+ ND E + +F +++ + + +D + W S+K F V Y
Sbjct: 188 WNFQFRRHLNDWEVMRVAEFLNIVGNF--NGLQAEEDALWWKGSSKGIFKVGAAY 240
>ref|XP_006352964.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 323
Score = 58.5 bits (140), Expect(2) = 1e-08
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -3
Query: 384 WPWKQISRSKAPFQVVFFSRFCMKNLVSLM-KISKKEVLICSKRVLCGRHSESICHMFLH 208
WPW+QI + + P++V F K + K+ + +CS+ LCG SE++ H+FLH
Sbjct: 159 WPWRQIWKGRIPYKVSCFIWLLAKEAALTQDNVMKRGITLCSRCFLCGETSETVNHLFLH 218
Query: 207 WYTTMQLWQLY 175
T QLW+++
Sbjct: 219 CKFTQQLWRVF 229
Score = 26.9 bits (58), Expect(2) = 1e-08
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 557 WSINLRRNFND*EANKDVDFFDLLKHILVDN*YRRQDNIRWIPSNKASFTVRRTY 393
W+ RR+ ND E + +F +++ + + +D + W S+K F V Y
Sbjct: 94 WNFQFRRHLNDWEVMRVAEFLNIVGNF--NGLQAEEDALWWKGSSKGIFKVGAAY 146
>ref|XP_006365287.1| PREDICTED: uncharacterized protein LOC102597191 [Solanum tuberosum]
Length = 305
Score = 50.8 bits (120), Expect(2) = 2e-08
Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = -3
Query: 408 SEENLLSPWPWKQISRSKAPFQVVFFSRFCM-KNLVSLMKISKKEVLICSKRVLCGRHSE 232
S +++ WPWK I R+K P +VVFF+ + + ++ I K+++ ++ +C + +E
Sbjct: 130 SRNPVIANWPWKLIWRTKLPPKVVFFTWIALYEACLTQDNIKKRKIQFPNRCYMCKKEAE 189
Query: 231 SICHMFLHWYTTMQLWQLYDC 169
+ H+ LH +LW ++ C
Sbjct: 190 TPRHLLLHCEVASELWSMFFC 210
Score = 33.9 bits (76), Expect(2) = 2e-08
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = -1
Query: 557 WSINLRRNFND*EANKDVDFFDLLKHILVDN*YRRQDNIRWIPSNKASFTVRRTY 393
W + RRN +D E N VD F L+H ++ + D ++W K +TV+ Y
Sbjct: 74 WDLRFRRNMHDWEVNDLVDLFARLQHCHIN--LQAADKLKW-GHQKGVYTVKEGY 125
>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 517
Score = 62.8 bits (151), Expect = 9e-08
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = -2
Query: 325 ILYEEPCLTHENLQKRGFDM*QASFMRETFREHLPHVFALVHYYAVVATL*LQ*-----I 161
++ + CLT E LQK+G + F+ E H+F +Y A + L L
Sbjct: 373 LVIKRACLTQEVLQKKGRQLVPRCFLCNLTSETNSHLFLHCNYTAQIWNLFLSISNLNWT 432
Query: 160 MPCSSNDLPRCWHRKGLRKRKLLWWNTILACIWWTVWTERK*KMF 26
MP ++++ + W R+G K + WW I +CIWW+VW ER + F
Sbjct: 433 MPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWWSVWKERNNRCF 477
>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Solanum tuberosum]
Length = 284
Score = 62.8 bits (151), Expect = 9e-08
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = -2
Query: 325 ILYEEPCLTHENLQKRGFDM*QASFMRETFREHLPHVFALVHYYAVVATL*LQ*-----I 161
++ + CLT E LQK+G + F+ E H+F +Y A + L L
Sbjct: 140 LVIKRACLTQEVLQKKGRQLVPRCFLCNLTSETNSHLFLHCNYTAQIWNLFLNISNLNWT 199
Query: 160 MPCSSNDLPRCWHRKGLRKRKLLWWNTILACIWWTVWTERK*KMF 26
MP ++++ + W R+G K + WW I +CIWW+VW ER + F
Sbjct: 200 MPERTSNVLKSWVRRGSTKSQKRWWRLIPSCIWWSVWKERNSRCF 244
>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Solanum tuberosum]
Length = 284
Score = 62.0 bits (149), Expect = 2e-07
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Frame = -2
Query: 325 ILYEEPCLTHENLQKRGFDM*QASFMRETFREHLPHVFALVHYYAVVATL*LQ*-----I 161
++ + CLT E LQK+G + F+ E H+F +Y A + L L
Sbjct: 140 LVIKRACLTQEVLQKKGRQLVPRCFLCNLTSETNSHLFLHCNYTAQIWNLFLSISNLNWT 199
Query: 160 MPCSSNDLPRCWHRKGLRKRKLLWWNTILACIWWTVWTERK*KMF 26
MP ++++ + W R+G K + WW I +CIWW+VW ER + F
Sbjct: 200 MPERTSNVLKSWVRRGGTKSQKRWWRLIPSCIWWSVWKERNSRCF 244
>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
Length = 255
Score = 61.2 bits (147), Expect = 3e-07
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Frame = -2
Query: 307 CLTHENLQKRGFDM*QASFMRETFREHLPHVF-----ALVHYYAVVATL*LQ*IMPCSSN 143
CLTHE +Q+RG + FM E H+F A + + L + +MP ++
Sbjct: 116 CLTHEVIQRRGIQICSRCFMCGEEAEVNSHLFLHCRTAANLWNMFLCILGVNWVMPKTTL 175
Query: 142 DLPRCWHRKGLRKR-KLLWWNTILACIWWTVWTERK*KMF*RFLSSTK 2
+L R W G R+R K WW I ACIWWT+W ER + L+ST+
Sbjct: 176 ELLRQWEGVGRRRRSKEDWWKCIPACIWWTLWKERNERSHDGKLNSTQ 223
>ref|XP_006350483.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 258
Score = 49.7 bits (117), Expect(2) = 2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = -3
Query: 381 PWKQISRSKAPFQVVFFSRFCMKNLVSLMK-ISKKEVLICSKRVLCGRHSESICHMFLHW 205
PWK I + K P++VV F+ +K V + + K+ + +C + C + +E+I H+FLH
Sbjct: 171 PWKLIWKVKIPYKVVVFTWLVVKEAVLTQENLMKRGIQMCPRCCFCEQVAETINHLFLHC 230
Query: 204 YTTMQLWQLY 175
QLW L+
Sbjct: 231 KVVGQLWNLF 240
Score = 28.5 bits (62), Expect(2) = 2e-06
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -1
Query: 557 WSINLRRNFND*EANKDVDFFDLLKHILVDN*YRRQDNIRWIPSNKASFTVRRTY*VL 384
W++ RR D E + +F+ L L +D ++W NK FTV Y ++
Sbjct: 105 WNLTYRRLMQDWEVERLAEFYGTLDQFLGFK--DGEDTLKWKCHNKGLFTVCSAYRIM 160
>ref|XP_006354966.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 397
Score = 48.1 bits (113), Expect(2) = 2e-06
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = -3
Query: 381 PWKQISRSKAPFQVVFFSRFCMKNLVSLMK-ISKKEVLICSKRVLCGRHSESICHMFLHW 205
PWK I + K P++VV F+ +K V + + K+ + +C + C + +E+I H+FLH
Sbjct: 234 PWKLIWKVKIPYKVVVFTWLVVKEAVLTQENLMKRGIQMCPRCCFCEQVAETINHLFLHC 293
Query: 204 YTTMQLWQLY 175
+LW L+
Sbjct: 294 KVVGKLWNLF 303
Score = 29.6 bits (65), Expect(2) = 2e-06
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -1
Query: 557 WSINLRRNFND*EANKDVDFFDLLKHILVDN*YRRQDNIRWIPSNKASFTVRRTY 393
W++ RR D E + +F+ L L +D ++W NK FTV Y
Sbjct: 168 WNLTYRRLMQDWEVERLAEFYGTLDQFLGFK--EGEDTLKWKCHNKGLFTVSSAY 220
>emb|CAN75353.1| hypothetical protein VITISV_030454 [Vitis vinifera]
Length = 1101
Score = 47.0 bits (110), Expect(2) = 4e-06
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Frame = -2
Query: 313 EPCLTHENLQKRGFDM*QASFMRETFREHLPHVFALVHYYAV-------VATL*LQ*IMP 155
E LT + LQ RG+ + F+ E++ H+ L+H V A +Q + P
Sbjct: 958 EKILTLDRLQMRGWQLPNCCFLCGCEEENVNHI--LLHXTVVRTLWEIAFALFGVQWVFP 1015
Query: 154 CSSNDLPRCWHRKGLRKRKLLWWNTILACIWWTVWTER 41
+ CW + K++ W TI CI+WTVW ER
Sbjct: 1016 EKVKEALFCWRGPFVGKKRKKIWKTIPLCIFWTVWKER 1053
Score = 30.0 bits (66), Expect(2) = 4e-06
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -1
Query: 557 WSINLRRNFND*EANKDVDFFDLLKHILVDN*YRRQDNIRWIPSNKASFTVRRTY*VLGH 378
W++ L R+ ND E D LL+ I V +D++ W + ASF +R Y +L
Sbjct: 872 WNLRLVRDSNDWELVLIEDLLFLLRDIRVT---LEEDSVLWKGGDSASFRIRVAYNLLXA 928
Query: 377 GN 372
N
Sbjct: 929 PN 930