BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00026215
         (536 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymera...    89   6e-16
ref|XP_004252669.1| PREDICTED: probable mediator of RNA polymera...    86   7e-15
ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymera...    84   2e-14
gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]      70   4e-10
emb|CBI32806.3| unnamed protein product [Vitis vinifera]               68   1e-09
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera...    68   1e-09
ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citr...    68   1e-09
ref|XP_002517284.1| conserved hypothetical protein [Ricinus comm...    65   1e-08
ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymera...    63   4e-08
ref|XP_002308874.2| transcription elongation factor-related fami...    62   6e-08
gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus pe...    62   6e-08
gb|EOY08735.1| Transcription elongation factor family protein, p...    62   8e-08
gb|EOY08734.1| Transcription elongation factor family protein, p...    62   8e-08
ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymera...    62   8e-08
ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymera...    62   8e-08
ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Popu...    61   2e-07
ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Popu...    61   2e-07
gb|ESW17432.1| hypothetical protein PHAVU_007G239100g [Phaseolus...    60   4e-07
ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250...    59   5e-07
gb|AFK48326.1| unknown [Medicago truncatula]                           59   9e-07

>ref|XP_006339256.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum tuberosum]
          Length = 455

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 40/43 (93%), Positives = 40/43 (93%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRTIQVMELHDIPKKGPNQ VG KN HMRPGNNNRHWANGRR
Sbjct: 413 RQRTIQVMELHDIPKKGPNQGVGLKNAHMRPGNNNRHWANGRR 455


>ref|XP_004252669.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum lycopersicum]
          Length = 217

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 38/43 (88%), Positives = 38/43 (88%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           R RTIQVMELHDIPKKGPNQ VG KN HMRPGNNNRHW NGRR
Sbjct: 175 RHRTIQVMELHDIPKKGPNQGVGLKNAHMRPGNNNRHWTNGRR 217


>ref|XP_004249321.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Solanum lycopersicum]
          Length = 455

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/43 (88%), Positives = 38/43 (88%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRTIQVMEL DIPKKGPNQ VG KN HMRPGNNNRHW NGRR
Sbjct: 413 RQRTIQVMELRDIPKKGPNQGVGLKNAHMRPGNNNRHWTNGRR 455


>gb|EXB43778.1| hypothetical protein L484_004632 [Morus notabilis]
          Length = 464

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 30/43 (69%), Positives = 37/43 (86%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRTIQVMELHD+PK+G    +G +NPHM+PGN+NRHW +GRR
Sbjct: 426 RQRTIQVMELHDLPKQG----LGHRNPHMKPGNHNRHWGHGRR 464


>emb|CBI32806.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRTIQVMEL D+PK+G    +G +NPH+R GNNNRHWANGRR
Sbjct: 299 RQRTIQVMELQDLPKQG----LGHRNPHIRHGNNNRHWANGRR 337


>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Citrus sinensis]
          Length = 448

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           +QRTIQVMELHD+PK+G    +G +NP +RPGN NRHWANGRR
Sbjct: 410 KQRTIQVMELHDLPKQG----LGNRNPQLRPGNYNRHWANGRR 448


>ref|XP_006430523.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
           gi|557532580|gb|ESR43763.1| hypothetical protein
           CICLE_v10011717mg [Citrus clementina]
          Length = 448

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           +QRTIQVMELHD+PK+G    +G +NP +RPGN NRHWANGRR
Sbjct: 410 KQRTIQVMELHDLPKQG----LGNRNPQLRPGNYNRHWANGRR 448


>ref|XP_002517284.1| conserved hypothetical protein [Ricinus communis]
           gi|223543547|gb|EEF45077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 473

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRTIQVMELHD+PK    Q +  KNP+MRPG++NRHWA+GRR
Sbjct: 432 RQRTIQVMELHDLPK----QALVQKNPNMRPGSHNRHWAHGRR 470


>ref|XP_006575124.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like isoform X1 [Glycine max]
           gi|571440343|ref|XP_006575125.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26b-like isoform X2 [Glycine max]
          Length = 453

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRT+QVMELHD+PK+G    +G +NPH++PGN+ R W +GRR
Sbjct: 415 RQRTVQVMELHDLPKQG----IGHRNPHVKPGNHKRQWGHGRR 453


>ref|XP_002308874.2| transcription elongation factor-related family protein [Populus
           trichocarpa] gi|550335369|gb|EEE92397.2| transcription
           elongation factor-related family protein [Populus
           trichocarpa]
          Length = 483

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRTIQVMELHD+PK+G  Q    KN  +RPGN NRHWA+GRR
Sbjct: 442 RQRTIQVMELHDLPKQGYVQ----KNQPIRPGNQNRHWAHGRR 480


>gb|EMJ03252.1| hypothetical protein PRUPE_ppa005771mg [Prunus persica]
          Length = 444

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRT+QVMEL D+PK+G    +  +NPH +PGN+NRHWA+GRR
Sbjct: 406 RQRTVQVMELQDLPKQG----LARRNPHGKPGNHNRHWAHGRR 444


>gb|EOY08735.1| Transcription elongation factor family protein, putative isoform 2
           [Theobroma cacao]
          Length = 324

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           R+RTIQVMELHD+PK+G      PKN +M+PGN+NR W NGRR
Sbjct: 286 RKRTIQVMELHDLPKQGSV----PKNAYMKPGNHNRQWVNGRR 324


>gb|EOY08734.1| Transcription elongation factor family protein, putative isoform 1
           [Theobroma cacao]
          Length = 464

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 28/43 (65%), Positives = 34/43 (79%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           R+RTIQVMELHD+PK+G      PKN +M+PGN+NR W NGRR
Sbjct: 426 RKRTIQVMELHDLPKQGSV----PKNAYMKPGNHNRQWVNGRR 464


>ref|XP_004173745.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 240

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           +QRTIQVMELHD+PK+G    +G +NPH++ G  NR+WANGRR
Sbjct: 202 KQRTIQVMELHDLPKQG----IGHRNPHLKSGGFNRNWANGRR 240


>ref|XP_004136624.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26b-like [Cucumis sativus]
          Length = 452

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 27/43 (62%), Positives = 35/43 (81%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           +QRTIQVMELHD+PK+G    +G +NPH++ G  NR+WANGRR
Sbjct: 414 KQRTIQVMELHDLPKQG----IGHRNPHLKSGGFNRNWANGRR 452


>ref|XP_002323227.2| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
           gi|550320725|gb|EEF04988.2| hypothetical protein
           POPTR_0016s03310g [Populus trichocarpa]
          Length = 480

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRTIQVMELHD+PK+G  Q    KN  MR GN+NRHWA+GRR
Sbjct: 442 RQRTIQVMELHDLPKQGHVQ----KNQPMRLGNHNRHWAHGRR 480


>ref|XP_002323230.1| hypothetical protein POPTR_0016s03310g [Populus trichocarpa]
           gi|222867860|gb|EEF04991.1| hypothetical protein
           POPTR_0016s03310g [Populus trichocarpa]
          Length = 474

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRTIQVMELHD+PK+G  Q    KN  MR GN+NRHWA+GRR
Sbjct: 436 RQRTIQVMELHDLPKQGHVQ----KNQPMRLGNHNRHWAHGRR 474


>gb|ESW17432.1| hypothetical protein PHAVU_007G239100g [Phaseolus vulgaris]
          Length = 457

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRT+QVMELHD+PK    Q +G +NPH++PGN  + W  GRR
Sbjct: 419 RQRTVQVMELHDLPK----QSIGHRNPHVKPGNQRKQWGQGRR 457


>ref|XP_002277659.2| PREDICTED: uncharacterized protein LOC100250012 [Vitis vinifera]
          Length = 521

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWAN 415
           RQRTIQVMEL D+PK+G    +G +NPH+R GNNNRHW N
Sbjct: 449 RQRTIQVMELQDLPKQG----LGHRNPHIRHGNNNRHWWN 484


>gb|AFK48326.1| unknown [Medicago truncatula]
          Length = 451

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 26/43 (60%), Positives = 33/43 (76%)
 Frame = -3

Query: 534 RQRTIQVMELHDIPKKGPNQVVGPKNPHMRPGNNNRHWANGRR 406
           RQRTIQVME++D+PK+G  Q    +N H +PGN+NR W NGRR
Sbjct: 413 RQRTIQVMEINDLPKQGSVQ----RNTHFKPGNHNRQWGNGRR 451