BLASTX nr result

ID: Atropa21_contig00026184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00026184
         (874 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006365173.1| PREDICTED: probable beta-1,4-xylosyltransfer...    68   4e-09
ref|XP_004245273.1| PREDICTED: probable beta-1,4-xylosyltransfer...    67   7e-09
ref|XP_006340260.1| PREDICTED: probable beta-1,4-xylosyltransfer...    58   4e-06

>ref|XP_006365173.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like isoform
           X1 [Solanum tuberosum] gi|565399260|ref|XP_006365174.1|
           PREDICTED: probable beta-1,4-xylosyltransferase
           IRX9H-like isoform X2 [Solanum tuberosum]
           gi|565399262|ref|XP_006365175.1| PREDICTED: probable
           beta-1,4-xylosyltransferase IRX9H-like isoform X3
           [Solanum tuberosum] gi|565399264|ref|XP_006365176.1|
           PREDICTED: probable beta-1,4-xylosyltransferase
           IRX9H-like isoform X4 [Solanum tuberosum]
          Length = 440

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 37/58 (63%), Positives = 40/58 (68%)
 Frame = -3

Query: 176 MASIRRTLSPVPHPGSTMNGEVXXXXXXXXXXXXSCNHSYTPTSSLMSSFGSLDYAIY 3
           MASIRRTLSPVP PGSTMNGEV            SC +S TPT +L+ SFGS DYAIY
Sbjct: 1   MASIRRTLSPVPRPGSTMNGEV-CPAASPLSKSSSCTNSNTPTGALLPSFGSFDYAIY 57


>ref|XP_004245273.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Solanum
           lycopersicum]
          Length = 440

 Score = 67.4 bits (163), Expect = 7e-09
 Identities = 37/58 (63%), Positives = 40/58 (68%)
 Frame = -3

Query: 176 MASIRRTLSPVPHPGSTMNGEVXXXXXXXXXXXXSCNHSYTPTSSLMSSFGSLDYAIY 3
           MASIRRTLSPVP PGS MNGEV            SC +S TPT + +SSFGSLDYAIY
Sbjct: 1   MASIRRTLSPVPRPGSAMNGEV-CSVASPLSKSSSCTNSNTPTGASLSSFGSLDYAIY 57


>ref|XP_006340260.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9H-like [Solanum
           tuberosum]
          Length = 444

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 33/59 (55%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = -3

Query: 176 MASIRRTLSPVPHPGSTMNGEVXXXXXXXXXXXXSCNHSYTPTSSLMSS-FGSLDYAIY 3
           MASIRR LSPVP PG   NGE              CN SYTP   LMSS FGSLDY  Y
Sbjct: 1   MASIRRALSPVPRPGDRTNGEA-CFVSSPLSKSSLCNQSYTPPEGLMSSCFGSLDYVFY 58


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