BLASTX nr result
ID: Atropa21_contig00026154
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00026154
(1648 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 674 0.0
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 671 0.0
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 505 e-140
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 505 e-140
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 493 e-136
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 493 e-136
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 480 e-133
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 479 e-132
gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao] 479 e-132
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 478 e-132
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 469 e-129
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 456 e-125
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 456 e-125
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 456 e-125
gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlise... 454 e-125
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 452 e-124
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 452 e-124
ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III s... 448 e-123
ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III s... 448 e-123
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 446 e-122
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 674 bits (1738), Expect = 0.0
Identities = 351/366 (95%), Positives = 357/366 (97%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRYHLKRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK
Sbjct: 1023 SRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 1082
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
ITTPIIT KLLSAANLTAARMIKARIEKTLLGQVAKSVKIV+ASRLASI ISLDMETIQV
Sbjct: 1083 ITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQV 1142
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVV 540
SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLP V
Sbjct: 1143 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAV 1202
Query: 541 VVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIME 720
VVKGITTVQRAVVNKEQQKDRK+DVKGETYELLVEGTGLLAVMGIEGVDGR TKSNHIME
Sbjct: 1203 VVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIME 1262
Query: 721 VRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 900
V+ TLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD
Sbjct: 1263 VQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 1322
Query: 901 SVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQVELNY 1080
SVLMLASFEKTTDHLFNASVNGRDDKIEGV+ECIIMGIPM IGTGMFKLRQ VEQVELNY
Sbjct: 1323 SVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEQVELNY 1382
Query: 1081 QSEPTI 1098
Q +P I
Sbjct: 1383 QPDPII 1388
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 671 bits (1730), Expect = 0.0
Identities = 349/364 (95%), Positives = 355/364 (97%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRYHLKRLE+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK
Sbjct: 1023 SRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 1082
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
ITTPIITAKLLSA NLTAARMIKARIEKTLLGQVAKSVKIV+ASRLASI ISLDMETIQV
Sbjct: 1083 ITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLASRLASIAISLDMETIQV 1142
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVV 540
SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLP V
Sbjct: 1143 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPAV 1202
Query: 541 VVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIME 720
VVKGITTVQRAVVNKEQQKDRK+DVKGETYELLVEGTGLLAVMGIEGVDGR TKSNHIME
Sbjct: 1203 VVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVMGIEGVDGRYTKSNHIME 1262
Query: 721 VRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 900
V+ TLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD
Sbjct: 1263 VQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 1322
Query: 901 SVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQVELNY 1080
SVLMLASFEKTTDHLFNASVNGRDDKIEGV+ECIIMGIPM IGTGMFKLRQ VE VELNY
Sbjct: 1323 SVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIGTGMFKLRQRVEHVELNY 1382
Query: 1081 QSEP 1092
Q +P
Sbjct: 1383 QPDP 1386
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 505 bits (1301), Expect = e-140
Identities = 261/353 (73%), Positives = 303/353 (85%), Gaps = 2/353 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRYH+KR+E+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEIIN AK+
Sbjct: 1034 SRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKR 1093
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA+L N AAR++K RIEKTLLGQVAKS+KIVM SRLASIVI+LDMETIQ
Sbjct: 1094 ISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQD 1153
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVV 540
+ LCI+A VK+SI+QT KIKLK+ IKVL+ RKLE+FP +K K+HFEL+ LKN LP+V
Sbjct: 1154 AHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMV 1213
Query: 541 VVKGITTVQRAVVNKEQQKDRKSDVKGE--TYELLVEGTGLLAVMGIEGVDGRNTKSNHI 714
+VKGI TV+R V+ +++++ RK GE Y LLVEGTGL AVMG EG+DG TKSNHI
Sbjct: 1214 IVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHI 1273
Query: 715 MEVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKM 894
EV+QTLGIEAAR+ IIDEIN TM +HGM+ID RHMMLLADLMT++GEVLGITR G+QKM
Sbjct: 1274 FEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKM 1333
Query: 895 KDSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQ 1053
SVLMLASFEKT DHLFNASVNGRDD+IEGVSECIIMGIPM +GTG+ K+RQ
Sbjct: 1334 DKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQ 1386
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 505 bits (1301), Expect = e-140
Identities = 261/353 (73%), Positives = 303/353 (85%), Gaps = 2/353 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRYH+KR+E+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEIIN AK+
Sbjct: 1027 SRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKR 1086
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA+L N AAR++K RIEKTLLGQVAKS+KIVM SRLASIVI+LDMETIQ
Sbjct: 1087 ISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQD 1146
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVV 540
+ LCI+A VK+SI+QT KIKLK+ IKVL+ RKLE+FP +K K+HFEL+ LKN LP+V
Sbjct: 1147 AHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEIFPPVDKSKIHFELYSLKNVLPMV 1206
Query: 541 VVKGITTVQRAVVNKEQQKDRKSDVKGE--TYELLVEGTGLLAVMGIEGVDGRNTKSNHI 714
+VKGI TV+R V+ +++++ RK GE Y LLVEGTGL AVMG EG+DG TKSNHI
Sbjct: 1207 IVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHI 1266
Query: 715 MEVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKM 894
EV+QTLGIEAAR+ IIDEIN TM +HGM+ID RHMMLLADLMT++GEVLGITR G+QKM
Sbjct: 1267 FEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKM 1326
Query: 895 KDSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQ 1053
SVLMLASFEKT DHLFNASVNGRDD+IEGVSECIIMGIPM +GTG+ K+RQ
Sbjct: 1327 DKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECIIMGIPMPLGTGILKIRQ 1379
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 493 bits (1268), Expect = e-136
Identities = 262/368 (71%), Positives = 304/368 (82%), Gaps = 1/368 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRY LKR+E+GTAIGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+
Sbjct: 1461 SRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKR 1520
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA L N+ ARM+K RIE+T LGQVAKS+KIV+ SRLA I ++LDME IQ
Sbjct: 1521 ISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQA 1580
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVV 540
SQL ID+ V++SIL+ +IKLK+ IKVL+ KLEV PQ ++ +HFELH LKN LP V
Sbjct: 1581 SQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNLLPTV 1640
Query: 541 VVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIME 720
VVKGI TV+RAV+NK+ + VK Y LLVEGTGL VMG EGV GR T SNHI+E
Sbjct: 1641 VVKGIETVERAVINKDNK------VK---YNLLVEGTGLQTVMGTEGVIGRETTSNHIIE 1691
Query: 721 VRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 900
V+QTLGIEAAR II+EI YTM+SHGM+ID+RHMMLLADLMT++GEVLGITR G+QKM
Sbjct: 1692 VQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDK 1751
Query: 901 SVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQV-ELN 1077
SVLMLASFEKT DHLFNASV+GRDDKIEGVSECIIMGIPMQ+GTG+ K+RQ ++QV EL+
Sbjct: 1752 SVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVPELS 1811
Query: 1078 YQSEPTIS 1101
Y +P IS
Sbjct: 1812 YGLDPIIS 1819
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 493 bits (1268), Expect = e-136
Identities = 262/368 (71%), Positives = 304/368 (82%), Gaps = 1/368 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRY LKR+E+GTAIGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+
Sbjct: 1025 SRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKR 1084
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA L N+ ARM+K RIE+T LGQVAKS+KIV+ SRLA I ++LDME IQ
Sbjct: 1085 ISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQA 1144
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVV 540
SQL ID+ V++SIL+ +IKLK+ IKVL+ KLEV PQ ++ +HFELH LKN LP V
Sbjct: 1145 SQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNLLPTV 1204
Query: 541 VVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIME 720
VVKGI TV+RAV+NK+ + VK Y LLVEGTGL VMG EGV GR T SNHI+E
Sbjct: 1205 VVKGIETVERAVINKDNK------VK---YNLLVEGTGLQTVMGTEGVIGRETTSNHIIE 1255
Query: 721 VRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 900
V+QTLGIEAAR II+EI YTM+SHGM+ID+RHMMLLADLMT++GEVLGITR G+QKM
Sbjct: 1256 VQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRFGIQKMDK 1315
Query: 901 SVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQV-ELN 1077
SVLMLASFEKT DHLFNASV+GRDDKIEGVSECIIMGIPMQ+GTG+ K+RQ ++QV EL+
Sbjct: 1316 SVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRLQQVPELS 1375
Query: 1078 YQSEPTIS 1101
Y +P IS
Sbjct: 1376 YGLDPIIS 1383
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 480 bits (1235), Expect = e-133
Identities = 253/354 (71%), Positives = 292/354 (82%), Gaps = 1/354 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRYH K++E+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AK+
Sbjct: 1036 SRYHTKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKR 1095
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPI+TA L N+ ARM+KARIEKT LGQ+AK ++IVM+SR A I I LDME I+
Sbjct: 1096 ISTPIVTAALTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRD 1155
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQ-ANKDKLHFELHRLKNKLPV 537
++L +DA VKQ+IL T K+KLK I VL+ RKL V PQ A+++KLHF LH LKN LP
Sbjct: 1156 AELYVDANVVKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPG 1215
Query: 538 VVVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIM 717
VVVKGI TV RAV+ +E+ K R + + + LLVEGTGL AVMG EGVDG NTKSNHI+
Sbjct: 1216 VVVKGIKTVGRAVIKEEKDKARNA----KKFSLLVEGTGLQAVMGTEGVDGCNTKSNHII 1271
Query: 718 EVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMK 897
EV+Q LGIEAAR II+EI YTM SHGM+ID+RHMMLL DLMT++GEVLGITR G+QKM
Sbjct: 1272 EVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRHMMLLGDLMTFRGEVLGITRFGIQKMD 1331
Query: 898 DSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCV 1059
SVLMLASFEKT DHLFNASVNGRDDKIEGVSEC+IMGIPM +GTGM K+RQ V
Sbjct: 1332 KSVLMLASFEKTADHLFNASVNGRDDKIEGVSECVIMGIPMPLGTGMLKVRQRV 1385
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 479 bits (1233), Expect = e-132
Identities = 257/369 (69%), Positives = 304/369 (82%), Gaps = 2/369 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRYH K++E+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIIN AKK
Sbjct: 813 SRYHSKKIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKK 872
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA L N+ AR+++ RIEK LGQVAKS+K VM SR+AS+VI+LDME IQ
Sbjct: 873 ISTPIITAILECDNNVNFARIVRGRIEKISLGQVAKSIKTVMTSRVASVVITLDMERIQD 932
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFP-QANKDKLHFELHRLKNKLPV 537
+ L IDA V+ SILQT +IKLK+ I+VL+ +KLE+ P ++N+ KL+ L L L
Sbjct: 933 ALLSIDANVVRDSILQTPRIKLKKEHIRVLDFKKLEILPYESNRSKLYHHLQFLAKMLQN 992
Query: 538 VVVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIM 717
++VKGI TV+RAV++ E KD+K+D+ + Y+LLVEGTGLL VMG EGVDGRNTK+NHI+
Sbjct: 993 ILVKGIKTVERAVISSE--KDKKTDIS-KKYKLLVEGTGLLGVMGTEGVDGRNTKTNHII 1049
Query: 718 EVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMK 897
EV+QTLGIEAAR IIDEI YTM SHGM+ID RHMMLLAD+MT +GEVLGITR G+QKM
Sbjct: 1050 EVQQTLGIEAARTCIIDEIEYTMKSHGMSIDTRHMMLLADVMTSRGEVLGITRFGIQKMD 1109
Query: 898 DSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVE-QVEL 1074
SVLMLASFEKT DHLFNASVNGR+DKIEGVSECIIMGIPMQIGTGM K+RQ V+ L
Sbjct: 1110 KSVLMLASFEKTADHLFNASVNGREDKIEGVSECIIMGIPMQIGTGMIKVRQRVDVPPML 1169
Query: 1075 NYQSEPTIS 1101
+Y +P +S
Sbjct: 1170 SYGPKPILS 1178
>gb|EOY20721.1| DNA-directed RNA polymerase [Theobroma cacao]
Length = 1395
Score = 479 bits (1232), Expect = e-132
Identities = 252/370 (68%), Positives = 303/370 (81%), Gaps = 3/370 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRY K +E+GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEIINAAK+
Sbjct: 1026 SRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAAKR 1085
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TP+ITA+L N A+++K RIEKT+LGQVAKS+KIV+ SR AS+VI+LDME I
Sbjct: 1086 ISTPVITAELEFDDNPNIAQIVKGRIEKTVLGQVAKSIKIVITSRSASVVITLDMEIILD 1145
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVV 540
++L IDA VK+SILQT KIKLKE +KVL+ RKLEV P A++ ++HFELH LKN LP+V
Sbjct: 1146 AELYIDANIVKESILQTPKIKLKEQHVKVLDGRKLEVVPPADRSQIHFELHSLKNLLPLV 1205
Query: 541 VVKGITTVQRAVV--NKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHI 714
VVKGI TV+R VV +++K++K + + ++LLVEGTGL AVMGIEG+DGR T SNH+
Sbjct: 1206 VVKGIKTVERTVVYDKNKEKKNQKEEETTKHFQLLVEGTGLQAVMGIEGIDGRRTWSNHV 1265
Query: 715 MEVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKM 894
ME+ Q LGIEAAR IIDEI TM HGMTID RHMMLLAD+MT++GEVLGITR G+QKM
Sbjct: 1266 MEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRHMMLLADVMTFRGEVLGITRFGIQKM 1325
Query: 895 KDSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQVE- 1071
S+LMLASFE+T DHLFNA+VNGRDDKIEGV+ECIIMGIPMQIGTG+ K+ Q V+
Sbjct: 1326 DKSILMLASFERTADHLFNAAVNGRDDKIEGVTECIIMGIPMQIGTGILKVIQRVDPPPM 1385
Query: 1072 LNYQSEPTIS 1101
L Y +P +S
Sbjct: 1386 LRYGPDPVLS 1395
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 478 bits (1231), Expect = e-132
Identities = 250/368 (67%), Positives = 302/368 (82%), Gaps = 1/368 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
+RY KR+E GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEIIN AKK
Sbjct: 1016 NRYLWKRVEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKK 1075
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA+L N+TAAR+ K RI+KT+LGQVAKS+KIVM SR AS+VI+LDM+TIQ
Sbjct: 1076 ISTPIITAELEQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQN 1135
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVV 540
+QL +DA VK++IL+T +IKLK IKVL+ RKLEV P +++++HFELH LKN LP +
Sbjct: 1136 AQLSLDANIVKEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSI 1195
Query: 541 VVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIME 720
+V+GI TV+RAV+ +++ + +D + TY +LVEG GL VMG EGVDG T SNH+ME
Sbjct: 1196 IVQGIKTVERAVIAQKKHDGKANDQELPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVME 1255
Query: 721 VRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 900
V++ LGIEAAR IIDEIN TM HGM+ID+RHMMLL DLMT+KGEVLGITR G+QKM
Sbjct: 1256 VQKFLGIEAARKCIIDEINQTMEHHGMSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDK 1315
Query: 901 SVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQVE-LN 1077
SVLMLASFEKT DHL++A+V GRDDKIEGVSECIIMGIPMQIGTG+ K++Q V+ LN
Sbjct: 1316 SVLMLASFEKTADHLYHAAVFGRDDKIEGVSECIIMGIPMQIGTGILKVQQRVDPPPVLN 1375
Query: 1078 YQSEPTIS 1101
Y S+ IS
Sbjct: 1376 YGSDSIIS 1383
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 469 bits (1206), Expect = e-129
Identities = 242/350 (69%), Positives = 289/350 (82%)
Frame = +1
Query: 4 RYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 183
RY KR+E GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEIIN AK+I
Sbjct: 1044 RYVWKRIEPGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRI 1103
Query: 184 TTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQVS 363
+TPIIT +L +N+ AAR+IK RI+KT+LGQVAKS+KIVM SR AS+ ++LDM+TI+ +
Sbjct: 1104 STPIITVELEHNSNVNAARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREA 1163
Query: 364 QLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVVV 543
QL +DA V++ IL+T KIK K +I VL KLEVFP +++KLHFELH LKN LP VV
Sbjct: 1164 QLSLDANIVRELILETPKIKRKLQRINVLEDGKLEVFPGGDRNKLHFELHSLKNMLPAVV 1223
Query: 544 VKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIMEV 723
VKGI TV+R V+ +++ D ++D G Y + VEG GL AVMG EGVDGR TKSNHI+EV
Sbjct: 1224 VKGIKTVERVVIAQKKLDDAENDQGGPKYNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEV 1283
Query: 724 RQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKDS 903
++TLGIEAAR IIDEI TM SHGM+ID+RHMMLLAD+MT +G VLGITR G+QKM S
Sbjct: 1284 QETLGIEAARKCIIDEIKGTMESHGMSIDIRHMMLLADVMTSRGVVLGITRFGIQKMDKS 1343
Query: 904 VLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQ 1053
VLMLASFEKT+DHLFNASV G+DDKIEGVSECIIMGIP+ IGTG+ K++Q
Sbjct: 1344 VLMLASFEKTSDHLFNASVKGKDDKIEGVSECIIMGIPVAIGTGVLKIQQ 1393
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 456 bits (1174), Expect = e-125
Identities = 239/369 (64%), Positives = 294/369 (79%), Gaps = 2/369 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRY+ K +E+G +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK
Sbjct: 1034 SRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 1093
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIIT +LLS ++ +AR++K +EK +LG+VA ++KIV+ S ++V+ LDM+ I+
Sbjct: 1094 ISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVASAIKIVLKSSQPNLVVKLDMQLIEA 1153
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQA-NKDKLHFELHRLKNKLPV 537
+ I A +V+ SIL KIKLK ++V++ KL ++P +K KL ELH LK LP
Sbjct: 1154 LHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKSKLQLELHNLKAMLPK 1213
Query: 538 VVVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIM 717
V+VKGI TV+R V++ +RK + K E Y LLVEGT LLAVMG GVD RNTKSNHIM
Sbjct: 1214 VIVKGIPTVERVVID-----ERKKEGKLEKYNLLVEGTNLLAVMGTPGVDARNTKSNHIM 1268
Query: 718 EVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMK 897
E+ TLGIEAAR SIIDEI YTM SHGM ID+RHMMLLADLMTYKGEVLGITR+G+ KMK
Sbjct: 1269 EMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADLMTYKGEVLGITRYGIAKMK 1328
Query: 898 DSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQV-EL 1074
SVLMLASFEKT++HLFNAS +GR+D+IEGVSECIIMGIPMQ+GTG+ K+RQ ++ + EL
Sbjct: 1329 TSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEL 1388
Query: 1075 NYQSEPTIS 1101
YQ +P +S
Sbjct: 1389 KYQPDPILS 1397
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 456 bits (1172), Expect = e-125
Identities = 236/369 (63%), Positives = 297/369 (80%), Gaps = 2/369 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRYHLK++E+G +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK
Sbjct: 959 SRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 1018
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA+LLS ++ +AR++K +EK +LG+VA+++KIV+ S ++V+ LDM+ I+
Sbjct: 1019 ISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEA 1078
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQA-NKDKLHFELHRLKNKLPV 537
+ I A +V+ SIL KIKLK ++V++ KL ++P +K KL +ELH LK+ LP
Sbjct: 1079 LHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPK 1138
Query: 538 VVVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIM 717
V+VKGI TV+RAV+++ +++ K Y+LLVEGT LLAVMG GVD TKSNHIM
Sbjct: 1139 VIVKGIPTVERAVISETGEENDKR------YKLLVEGTNLLAVMGTPGVDAMKTKSNHIM 1192
Query: 718 EVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMK 897
EV +TLGIEAAR SIIDEI YTM SHGM ID RHMMLLADLMTYKGE+LGITR+G+ KMK
Sbjct: 1193 EVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMK 1252
Query: 898 DSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQV-EL 1074
SVLMLASFEKT +HLFNAS +GR+D+IEGVSECIIMGIPMQ+GTG+ K+RQ ++ + E
Sbjct: 1253 SSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEF 1312
Query: 1075 NYQSEPTIS 1101
YQ +P ++
Sbjct: 1313 KYQPDPILA 1321
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 456 bits (1172), Expect = e-125
Identities = 236/369 (63%), Positives = 297/369 (80%), Gaps = 2/369 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRYHLK++E+G +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK
Sbjct: 1021 SRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 1080
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA+LLS ++ +AR++K +EK +LG+VA+++KIV+ S ++V+ LDM+ I+
Sbjct: 1081 ISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEA 1140
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQA-NKDKLHFELHRLKNKLPV 537
+ I A +V+ SIL KIKLK ++V++ KL ++P +K KL +ELH LK+ LP
Sbjct: 1141 LHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPK 1200
Query: 538 VVVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIM 717
V+VKGI TV+RAV+++ +++ K Y+LLVEGT LLAVMG GVD TKSNHIM
Sbjct: 1201 VIVKGIPTVERAVISETGEENDKR------YKLLVEGTNLLAVMGTPGVDAMKTKSNHIM 1254
Query: 718 EVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMK 897
EV +TLGIEAAR SIIDEI YTM SHGM ID RHMMLLADLMTYKGE+LGITR+G+ KMK
Sbjct: 1255 EVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMK 1314
Query: 898 DSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQV-EL 1074
SVLMLASFEKT +HLFNAS +GR+D+IEGVSECIIMGIPMQ+GTG+ K+RQ ++ + E
Sbjct: 1315 SSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEF 1374
Query: 1075 NYQSEPTIS 1101
YQ +P ++
Sbjct: 1375 KYQPDPILA 1383
>gb|EPS62830.1| hypothetical protein M569_11956, partial [Genlisea aurea]
Length = 1368
Score = 454 bits (1169), Expect = e-125
Identities = 238/351 (67%), Positives = 287/351 (81%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
+RYH K++E GTA+GAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRI+EII+AAKK
Sbjct: 1020 ARYHPKKIECGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIREIIDAAKK 1079
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I TP+IT +L AR++K RIEKTLLG++AKS+K+ +R ASIVI LD + I+
Sbjct: 1080 IKTPVITTELQRKDCGITARIVKGRIEKTLLGEIAKSMKVSEMTRTASIVIKLDTKVIEA 1139
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQANKDKLHFELHRLKNKLPVV 540
+QL IDAYTVK+SIL T K+KLKE QI+VLN +KL V +A + KL FE L+NKL V
Sbjct: 1140 AQLFIDAYTVKESILLTPKMKLKEQQIRVLNRQKLTVSLEAERSKLEFESWALQNKLKDV 1199
Query: 541 VVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIME 720
VVKGI V+RA++ E + K + + +L+VEGTG L+V+GI+GVD RNTKSNHIME
Sbjct: 1200 VVKGIKQVERAIIVDE--ANGKDPNQRKKLKLVVEGTGFLSVLGIQGVDARNTKSNHIME 1257
Query: 721 VRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 900
V Q LGIE+AR IIDEI YTMS HGMTID+RHMMLLADLMT+KGEVLGITR+GV+KM+D
Sbjct: 1258 VFQVLGIESARRQIIDEIQYTMSGHGMTIDIRHMMLLADLMTFKGEVLGITRYGVRKMRD 1317
Query: 901 SVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQ 1053
SVLMLASFE+T DHLFNA VNGR D+IEGVSECI++GIPM+ GTGM K++Q
Sbjct: 1318 SVLMLASFERTADHLFNAPVNGRVDRIEGVSECIMLGIPMRTGTGMMKIKQ 1368
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 452 bits (1164), Expect = e-124
Identities = 236/369 (63%), Positives = 294/369 (79%), Gaps = 2/369 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRYH K++E+G +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK
Sbjct: 1031 SRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 1090
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA+LLS ++ +AR++K +EK +LG+VA+ +KIV+ S ++V+ LDM+ I+
Sbjct: 1091 ISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAEDIKIVLKSSQPNLVVKLDMQRIED 1150
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQA-NKDKLHFELHRLKNKLPV 537
+ I A +V+ SIL +IKLK ++V++ KL V+P A +K KL +ELH LK+ LP
Sbjct: 1151 LHMGISADSVQLSILNHPRIKLKSEHVRVIDKAKLRVYPTAIDKSKLLYELHNLKSMLPK 1210
Query: 538 VVVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIM 717
V+VKGI TV+RAV+++ G+ Y LLVEGT LLAVMG GVD TKSNHIM
Sbjct: 1211 VIVKGIPTVERAVISQT----------GDKYSLLVEGTNLLAVMGTPGVDAMKTKSNHIM 1260
Query: 718 EVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMK 897
EV +TLGIEAAR SIIDEI YTM+SHGM ID RHMMLLADLMTYKGE+LGITR+G+ KMK
Sbjct: 1261 EVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMK 1320
Query: 898 DSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQV-EL 1074
SVLMLASFEKT +HLFNAS +GR+D+IEGVSECIIMGIPMQ+GTG+ K+RQ ++ + E
Sbjct: 1321 SSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEF 1380
Query: 1075 NYQSEPTIS 1101
YQ +P ++
Sbjct: 1381 KYQPDPILA 1389
>ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi|162691719|gb|EDQ78080.1|
predicted protein [Physcomitrella patens]
Length = 1397
Score = 452 bits (1163), Expect = e-124
Identities = 244/368 (66%), Positives = 292/368 (79%), Gaps = 2/368 (0%)
Frame = +1
Query: 4 RYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKKI 183
RYH+KR+E G A+GA+GAQSIGEPGTQMTLKTFHFAGVASMN+TLGVPRIKEIINA+K I
Sbjct: 1040 RYHMKRVEPGAAVGAVGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI 1099
Query: 184 TTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQVS 363
+TPIITA L+S + AAR++K RIEKT LG+VAKS+K V+ + A I + LDM+ I
Sbjct: 1100 STPIITAVLVSGNDEKAARIVKGRIEKTTLGEVAKSIKTVLRASQAIISVKLDMKRIDAL 1159
Query: 364 QLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFP-QANKDKLHFELHRLKNKLPVV 540
QL I++ TV +I+QT KIKLK I++++ KL V P +K KL+F LH L N LP V
Sbjct: 1160 QLDINSDTVALAIVQTPKIKLKHVNIRIVDRDKLIVIPPDQDKGKLYFYLHSLCNMLPKV 1219
Query: 541 VVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIME 720
+VKGI +V+RAV+NKE KG Y LLVEGT L AVMGI GV+G+ TKSNH++E
Sbjct: 1220 IVKGIPSVERAVINKE---------KG-VYNLLVEGTNLKAVMGISGVNGKLTKSNHVIE 1269
Query: 721 VRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMKD 900
QTLGIEAAR IIDEI YTM SHGMTID RHMMLLAD+MTYKGEVLGITR G+ KMKD
Sbjct: 1270 AEQTLGIEAARNVIIDEIQYTMGSHGMTIDARHMMLLADVMTYKGEVLGITRFGIAKMKD 1329
Query: 901 SVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQV-ELN 1077
SVLMLASFEKTTDHLF+A+++GR DKIEGVSECIIMGIPM IGTG+FK+RQ VE++ +L+
Sbjct: 1330 SVLMLASFEKTTDHLFDAAIHGRVDKIEGVSECIIMGIPMPIGTGLFKIRQKVEKLPKLS 1389
Query: 1078 YQSEPTIS 1101
Y P +S
Sbjct: 1390 YGPTPLLS 1397
>ref|XP_004505924.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X2 [Cicer arietinum]
Length = 1291
Score = 448 bits (1153), Expect = e-123
Identities = 234/368 (63%), Positives = 295/368 (80%), Gaps = 1/368 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRY +K++E+GT IGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN AK
Sbjct: 927 SRYRIKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGAKD 986
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I TPI+TA L N ARM+K RIEKT LGQVAKS+K+VM SR A++VISLDME IQ
Sbjct: 987 IKTPIMTAILERDDNANTARMVKGRIEKTNLGQVAKSIKVVMTSRSATVVISLDMERIQD 1046
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQ-ANKDKLHFELHRLKNKLPV 537
+ L IDA+TVK+SIL+T+K+KLK +KVL+ +KL+V+P+ + ++++HF+L+ LKN LP
Sbjct: 1047 AHLNIDAHTVKESILRTAKLKLKAENVKVLDIKKLQVYPRLSGRNEIHFQLNILKNLLPS 1106
Query: 538 VVVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIM 717
VVVKG+ TV+RAV+ + K D K E + LLVEGTGL V+GIEGVDGR T+SNH+M
Sbjct: 1107 VVVKGVKTVERAVLEID-----KKDKKVEKFALLVEGTGLQQVLGIEGVDGRKTRSNHVM 1161
Query: 718 EVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMK 897
E+ LGIEAAR +IID+I YTM SHGM+ID+RH+MLLAD+MT +G+VLG+TRHG+QKM
Sbjct: 1162 EMLNVLGIEAARSTIIDQIQYTMGSHGMSIDVRHIMLLADIMTVRGQVLGMTRHGIQKMG 1221
Query: 898 DSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQVELN 1077
SVLMLASFE +TDHLF+AS+ GR D IEGVS+CIIMG P+++GTGM ++Q ++ L
Sbjct: 1222 RSVLMLASFESSTDHLFDASMRGRGDPIEGVSDCIIMGKPIRVGTGMIDIKQRLDPPVLP 1281
Query: 1078 YQSEPTIS 1101
+P +S
Sbjct: 1282 KGIDPILS 1289
>ref|XP_004505923.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Cicer arietinum]
Length = 1399
Score = 448 bits (1153), Expect = e-123
Identities = 234/368 (63%), Positives = 295/368 (80%), Gaps = 1/368 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRY +K++E+GT IGAIGA SIGEPGTQMTLKTFHFAGVASMNVTLGVPRI EIIN AK
Sbjct: 1035 SRYRIKKIEAGTPIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIIEIINGAKD 1094
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I TPI+TA L N ARM+K RIEKT LGQVAKS+K+VM SR A++VISLDME IQ
Sbjct: 1095 IKTPIMTAILERDDNANTARMVKGRIEKTNLGQVAKSIKVVMTSRSATVVISLDMERIQD 1154
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQ-ANKDKLHFELHRLKNKLPV 537
+ L IDA+TVK+SIL+T+K+KLK +KVL+ +KL+V+P+ + ++++HF+L+ LKN LP
Sbjct: 1155 AHLNIDAHTVKESILRTAKLKLKAENVKVLDIKKLQVYPRLSGRNEIHFQLNILKNLLPS 1214
Query: 538 VVVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIM 717
VVVKG+ TV+RAV+ + K D K E + LLVEGTGL V+GIEGVDGR T+SNH+M
Sbjct: 1215 VVVKGVKTVERAVLEID-----KKDKKVEKFALLVEGTGLQQVLGIEGVDGRKTRSNHVM 1269
Query: 718 EVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMK 897
E+ LGIEAAR +IID+I YTM SHGM+ID+RH+MLLAD+MT +G+VLG+TRHG+QKM
Sbjct: 1270 EMLNVLGIEAARSTIIDQIQYTMGSHGMSIDVRHIMLLADIMTVRGQVLGMTRHGIQKMG 1329
Query: 898 DSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQVELN 1077
SVLMLASFE +TDHLF+AS+ GR D IEGVS+CIIMG P+++GTGM ++Q ++ L
Sbjct: 1330 RSVLMLASFESSTDHLFDASMRGRGDPIEGVSDCIIMGKPIRVGTGMIDIKQRLDPPVLP 1389
Query: 1078 YQSEPTIS 1101
+P +S
Sbjct: 1390 KGIDPILS 1397
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 446 bits (1148), Expect = e-122
Identities = 233/369 (63%), Positives = 292/369 (79%), Gaps = 2/369 (0%)
Frame = +1
Query: 1 SRYHLKRLESGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK 180
SRY K++E+G +IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAA+K
Sbjct: 1028 SRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAARK 1087
Query: 181 ITTPIITAKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVMASRLASIVISLDMETIQV 360
I+TPIITA+LLS ++ +AR++K +EK +LG+VA +++IV+ S ++++ LDM+ I+
Sbjct: 1088 ISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVLKSSQPNLIVKLDMQLIES 1147
Query: 361 SQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVFPQA-NKDKLHFELHRLKNKLPV 537
+ I A +V+ SIL KIKLK ++V++ KL ++P +K KL ELH LK+ LP
Sbjct: 1148 LHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGTDKRKLQLELHNLKSILPK 1207
Query: 538 VVVKGITTVQRAVVNKEQQKDRKSDVKGETYELLVEGTGLLAVMGIEGVDGRNTKSNHIM 717
V+VKGI TV+R V+++ + K+ E Y+LLVEGT LLAVMG GVD TKSNHIM
Sbjct: 1208 VIVKGIPTVERVVIDEVKVKNET-----ERYQLLVEGTNLLAVMGTPGVDATKTKSNHIM 1262
Query: 718 EVRQTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTYKGEVLGITRHGVQKMK 897
E QTLGIEAAR SIIDEI YTM SHGM ID RHMMLLADLMTYKGE+LGITR+G+ KMK
Sbjct: 1263 ETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGEILGITRYGIAKMK 1322
Query: 898 DSVLMLASFEKTTDHLFNASVNGRDDKIEGVSECIIMGIPMQIGTGMFKLRQCVEQV-EL 1074
SVLMLASFEKT++HLFNAS +GR+D+IEGVSECIIMGIPMQ+GTG+ K+RQ ++ V E
Sbjct: 1323 SSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHVPEF 1382
Query: 1075 NYQSEPTIS 1101
YQ +P +S
Sbjct: 1383 KYQPDPILS 1391