BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00026065
         (616 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A...    53   6e-06

>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 517

 Score = 53.1 bits (126), Expect(2) = 6e-06
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = -1

Query: 283 HIYI*VGNGRKTLFLKGRWSGHTPLKYQFPTIFSIVNNHNVVVEAYWSSQVWTFSLRRRC 104
           ++YI VG+G KT F K  W   +PL+  FP +F I  N +  V   W+ Q W    RR  
Sbjct: 237 NLYIKVGSGTKTKFWKDVWIDQSPLRDLFPDLFQICGNPDANVGDCWTEQGWDLVFRRLL 296

Query: 103 DDW 95
           +DW
Sbjct: 297 NDW 299



 Score = 23.1 bits (48), Expect(2) = 6e-06
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 362 NPFGRNVTLR--GVGNWKYIRNS*CVLRAHLHI 270
           NP+   +T    GVG W+ IRN    +  +L+I
Sbjct: 208 NPWCTEITTEPYGVGAWRSIRNLWSQMETNLYI 240