BLASTX nr result
ID: Atropa21_contig00025132
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00025132
(485 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347497.1| PREDICTED: GRF1-interacting factor 2-like [S... 136 3e-30
ref|XP_004235012.1| PREDICTED: GRF1-interacting factor 3-like [S... 136 3e-30
emb|CBI23070.3| unnamed protein product [Vitis vinifera] 89 8e-16
ref|XP_002272754.1| PREDICTED: uncharacterized protein LOC100257... 89 8e-16
gb|AAB62864.1| contains region of similarity to SYT [Arabidopsis... 76 5e-12
ref|XP_006396328.1| hypothetical protein EUTSA_v10028952mg [Eutr... 76 5e-12
ref|XP_002875011.1| grf1-interacting factor 3 [Arabidopsis lyrat... 76 5e-12
ref|NP_567194.1| GRF1-interacting factor 3 [Arabidopsis thaliana... 76 5e-12
ref|XP_006418395.1| hypothetical protein EUTSA_v10008482mg [Eutr... 75 9e-12
ref|XP_006305651.1| hypothetical protein CARUB_v10010354mg [Caps... 75 9e-12
ref|NP_563619.1| GRF1-interacting factor 2 [Arabidopsis thaliana... 75 9e-12
ref|XP_002892085.1| hypothetical protein ARALYDRAFT_887341 [Arab... 75 9e-12
ref|NP_001154298.1| GRF1-interacting factor 2 [Arabidopsis thali... 75 9e-12
gb|ADL36704.1| GRF domain class transcription factor [Malus dome... 74 2e-11
ref|XP_006286750.1| hypothetical protein CARUB_v10003091mg [Caps... 74 2e-11
gb|EXB83836.1| hypothetical protein L484_023442 [Morus notabilis] 73 3e-11
ref|XP_006664034.1| PREDICTED: GRF1-interacting factor 3-like [O... 73 3e-11
ref|XP_006663047.1| PREDICTED: GRF1-interacting factor 2-like [O... 73 3e-11
gb|ESW07297.1| hypothetical protein PHAVU_010G118100g [Phaseolus... 73 3e-11
ref|XP_004979720.1| PREDICTED: GRF1-interacting factor 3-like is... 73 3e-11
>ref|XP_006347497.1| PREDICTED: GRF1-interacting factor 2-like [Solanum tuberosum]
Length = 197
Score = 136 bits (342), Expect = 3e-30
Identities = 83/144 (57%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIADXXXXXXXXXXXXXXXXQLGN 304
ENKNLILAILENQNLGKLSECAQYQA+LQKNLMYLAAIAD QLGN
Sbjct: 32 ENKNLILAILENQNLGKLSECAQYQAMLQKNLMYLAAIADAQPQQSAATSQAPSTPQLGN 91
Query: 303 -XXXXXXXXXXXXXQGVSVSKLPFQLNAIPS-XXXXXXXXXXXXXXXXXXXXXGPTTNNA 130
QGV++SKLPFQLNA+P+ GPT NNA
Sbjct: 92 QMQQTQAALQQQQQQGVAISKLPFQLNALPTQEQQQQMLQFQQQQQFQGQYGFGPTANNA 151
Query: 129 MRQLMQPGLSNSGTLDVRGNKQGS 58
MRQLMQPGL++SGT+DVRGNKQGS
Sbjct: 152 MRQLMQPGLNSSGTMDVRGNKQGS 175
>ref|XP_004235012.1| PREDICTED: GRF1-interacting factor 3-like [Solanum lycopersicum]
Length = 199
Score = 136 bits (342), Expect = 3e-30
Identities = 83/144 (57%), Positives = 91/144 (63%), Gaps = 2/144 (1%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIADXXXXXXXXXXXXXXXXQLGN 304
ENKNLILAILENQNLGKLSECAQYQA+LQKNLMYLAAIAD QLGN
Sbjct: 34 ENKNLILAILENQNLGKLSECAQYQAMLQKNLMYLAAIADAQPQQSAATSQAQSTPQLGN 93
Query: 303 -XXXXXXXXXXXXXQGVSVSKLPFQLNAIPS-XXXXXXXXXXXXXXXXXXXXXGPTTNNA 130
QGV++SKLPFQLNA+P+ GPT NNA
Sbjct: 94 QMQQTQAALQQQQQQGVAISKLPFQLNALPTQEQQQQMLQFQQQQQFQGQYGFGPTANNA 153
Query: 129 MRQLMQPGLSNSGTLDVRGNKQGS 58
MRQLMQPGL++SGT+DVRGNKQGS
Sbjct: 154 MRQLMQPGLNSSGTMDVRGNKQGS 177
>emb|CBI23070.3| unnamed protein product [Vitis vinifera]
Length = 195
Score = 88.6 bits (218), Expect = 8e-16
Identities = 60/142 (42%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIADXXXXXXXXXXXXXXXXQL-- 310
ENK LILAILENQNLGKL+ECAQYQA LQKNL+YLAAIAD +
Sbjct: 24 ENKQLILAILENQNLGKLAECAQYQAQLQKNLIYLAAIADAQPPAPTVPPQMPIHHAMQQ 83
Query: 309 GNXXXXXXXXXXXXXQGVSVSKLPFQLNAIPSXXXXXXXXXXXXXXXXXXXXXGPTTNNA 130
G+ G+ +KLPFQL+ P NN
Sbjct: 84 GHYMQHPQAAAAQQQPGMFGAKLPFQLSDQQQQQQHHLLHLQQQQPIQGLMGMRPIINNG 143
Query: 129 MRQLMQPGL-SNSGTLDVRGNK 67
M Q MQ GL + SG +DVRG+K
Sbjct: 144 MHQAMQTGLGALSGLMDVRGSK 165
>ref|XP_002272754.1| PREDICTED: uncharacterized protein LOC100257141 [Vitis vinifera]
Length = 198
Score = 88.6 bits (218), Expect = 8e-16
Identities = 60/142 (42%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIADXXXXXXXXXXXXXXXXQL-- 310
ENK LILAILENQNLGKL+ECAQYQA LQKNL+YLAAIAD +
Sbjct: 31 ENKQLILAILENQNLGKLAECAQYQAQLQKNLIYLAAIADAQPPAPTVPPQMPIHHAMQQ 90
Query: 309 GNXXXXXXXXXXXXXQGVSVSKLPFQLNAIPSXXXXXXXXXXXXXXXXXXXXXGPTTNNA 130
G+ G+ +KLPFQL+ P NN
Sbjct: 91 GHYMQHPQAAAAQQQPGMFGAKLPFQLSDQQQQQQHHLLHLQQQQPIQGLMGMRPIINNG 150
Query: 129 MRQLMQPGL-SNSGTLDVRGNK 67
M Q MQ GL + SG +DVRG+K
Sbjct: 151 MHQAMQTGLGALSGLMDVRGSK 172
>gb|AAB62864.1| contains region of similarity to SYT [Arabidopsis thaliana]
gi|7267424|emb|CAB80894.1| AT4g00850 [Arabidopsis
thaliana]
Length = 230
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AILENQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 32 ENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIAD 71
>ref|XP_006396328.1| hypothetical protein EUTSA_v10028952mg [Eutrema salsugineum]
gi|557097345|gb|ESQ37781.1| hypothetical protein
EUTSA_v10028952mg [Eutrema salsugineum]
Length = 219
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AILENQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 31 ENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIAD 70
>ref|XP_002875011.1| grf1-interacting factor 3 [Arabidopsis lyrata subsp. lyrata]
gi|297320848|gb|EFH51270.1| grf1-interacting factor 3
[Arabidopsis lyrata subsp. lyrata]
Length = 232
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AILENQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 40 ENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIAD 79
>ref|NP_567194.1| GRF1-interacting factor 3 [Arabidopsis thaliana]
gi|75163154|sp|Q93VH6.1|GIF3_ARATH RecName:
Full=GRF1-interacting factor 3; Short=AtGIF3; AltName:
Full=Transcription coactivator GIF3
gi|14190377|gb|AAK55669.1|AF378866_1
AT4g00850/A_TM018A10_22 [Arabidopsis thaliana]
gi|15450537|gb|AAK96446.1| AT4g00850/A_TM018A10_22
[Arabidopsis thaliana] gi|21539894|gb|AAM52883.1|
GRF1-interacting factor 3 [Arabidopsis thaliana]
gi|332656545|gb|AEE81945.1| GRF1-interacting factor 3
[Arabidopsis thaliana]
Length = 223
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/40 (92%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AILENQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 32 ENKKLIMAILENQNLGKLAECAQYQALLQKNLMYLAAIAD 71
>ref|XP_006418395.1| hypothetical protein EUTSA_v10008482mg [Eutrema salsugineum]
gi|557096166|gb|ESQ36748.1| hypothetical protein
EUTSA_v10008482mg [Eutrema salsugineum]
Length = 266
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AI+ENQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 93 ENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIAD 132
>ref|XP_006305651.1| hypothetical protein CARUB_v10010354mg [Capsella rubella]
gi|482574362|gb|EOA38549.1| hypothetical protein
CARUB_v10010354mg [Capsella rubella]
Length = 195
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AI+ENQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 31 ENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIAD 70
>ref|NP_563619.1| GRF1-interacting factor 2 [Arabidopsis thaliana]
gi|75192332|sp|Q9MAL9.1|GIF2_ARATH RecName:
Full=GRF1-interacting factor 2; Short=AtGIF2; AltName:
Full=Transcription coactivator GIF2
gi|6715636|gb|AAF26463.1|AC007323_4 T25K16.15
[Arabidopsis thaliana]
gi|15294232|gb|AAK95293.1|AF410307_1 At1g01160/F6F3_1
[Arabidopsis thaliana] gi|20857112|gb|AAM26700.1|
At1g01160/F6F3_1 [Arabidopsis thaliana]
gi|21539892|gb|AAM52882.1| GRF1-interacting factor 2
[Arabidopsis thaliana] gi|332189126|gb|AEE27247.1|
GRF1-interacting factor 2 [Arabidopsis thaliana]
Length = 195
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AI+ENQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 33 ENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIAD 72
>ref|XP_002892085.1| hypothetical protein ARALYDRAFT_887341 [Arabidopsis lyrata subsp.
lyrata] gi|297337927|gb|EFH68344.1| hypothetical protein
ARALYDRAFT_887341 [Arabidopsis lyrata subsp. lyrata]
Length = 224
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AI+ENQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 31 ENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIAD 70
>ref|NP_001154298.1| GRF1-interacting factor 2 [Arabidopsis thaliana]
gi|332189127|gb|AEE27248.1| GRF1-interacting factor 2
[Arabidopsis thaliana]
Length = 229
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AI+ENQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 67 ENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIAD 106
>gb|ADL36704.1| GRF domain class transcription factor [Malus domestica]
Length = 207
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
+NK LILAIL+NQNLGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 30 DNKKLILAILDNQNLGKLAECAQYQALLQKNLMYLAAIAD 69
>ref|XP_006286750.1| hypothetical protein CARUB_v10003091mg [Capsella rubella]
gi|482555456|gb|EOA19648.1| hypothetical protein
CARUB_v10003091mg [Capsella rubella]
Length = 226
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/40 (90%), Positives = 39/40 (97%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LI+AILENQ+LGKL+ECAQYQALLQKNLMYLAAIAD
Sbjct: 31 ENKKLIMAILENQHLGKLAECAQYQALLQKNLMYLAAIAD 70
>gb|EXB83836.1| hypothetical protein L484_023442 [Morus notabilis]
Length = 215
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LILAIL+NQNLGKL+ECAQYQA LQKNLMYLAAIAD
Sbjct: 30 ENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIAD 69
>ref|XP_006664034.1| PREDICTED: GRF1-interacting factor 3-like [Oryza brachyantha]
Length = 178
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LILAILENQNLGKL+ECAQYQA LQKNL+YLAAIAD
Sbjct: 31 ENKQLILAILENQNLGKLAECAQYQAQLQKNLLYLAAIAD 70
>ref|XP_006663047.1| PREDICTED: GRF1-interacting factor 2-like [Oryza brachyantha]
Length = 205
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LILAILENQNLGKL+ECAQYQA LQKNL+YLAAIAD
Sbjct: 33 ENKQLILAILENQNLGKLAECAQYQAQLQKNLLYLAAIAD 72
>gb|ESW07297.1| hypothetical protein PHAVU_010G118100g [Phaseolus vulgaris]
gi|561008349|gb|ESW07298.1| hypothetical protein
PHAVU_010G118100g [Phaseolus vulgaris]
gi|561008350|gb|ESW07299.1| hypothetical protein
PHAVU_010G118100g [Phaseolus vulgaris]
Length = 219
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LILAIL+NQNLGKL+ECAQYQA LQKNLMYLAAIAD
Sbjct: 30 ENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIAD 69
>ref|XP_004979720.1| PREDICTED: GRF1-interacting factor 3-like isoform X2 [Setaria
italica]
Length = 212
Score = 73.2 bits (178), Expect = 3e-11
Identities = 36/40 (90%), Positives = 38/40 (95%)
Frame = -3
Query: 483 ENKNLILAILENQNLGKLSECAQYQALLQKNLMYLAAIAD 364
ENK LILAILENQNLGKL+ECAQYQA LQKNL+YLAAIAD
Sbjct: 33 ENKQLILAILENQNLGKLAECAQYQAQLQKNLLYLAAIAD 72