BLASTX nr result
ID: Atropa21_contig00024910
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024910
(651 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006351071.1| PREDICTED: la-related protein 6-like isoform... 178 1e-42
ref|XP_004244780.1| PREDICTED: uncharacterized protein LOC101259... 171 1e-40
ref|XP_004251985.1| PREDICTED: uncharacterized protein LOC101263... 114 2e-23
ref|XP_004251984.1| PREDICTED: uncharacterized protein LOC101263... 114 2e-23
ref|XP_004253040.1| PREDICTED: uncharacterized protein LOC101250... 109 6e-22
ref|XP_006342440.1| PREDICTED: la-related protein 6-like [Solanu... 108 2e-21
ref|XP_006353141.1| PREDICTED: uncharacterized protein LOC102593... 104 3e-20
ref|XP_006442037.1| hypothetical protein CICLE_v10019649mg [Citr... 68 3e-09
ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinu... 64 3e-08
gb|EMJ03210.1| hypothetical protein PRUPE_ppa005181mg [Prunus pe... 64 4e-08
gb|EOY06991.1| RNA-binding protein, putative isoform 3 [Theobrom... 63 9e-08
gb|EOY06990.1| RNA-binding protein, putative isoform 2 [Theobrom... 63 9e-08
gb|EOY06989.1| RNA-binding protein, putative isoform 1 [Theobrom... 63 9e-08
ref|XP_004287183.1| PREDICTED: uncharacterized protein LOC101304... 58 2e-06
>ref|XP_006351071.1| PREDICTED: la-related protein 6-like isoform X1 [Solanum tuberosum]
Length = 465
Score = 178 bits (452), Expect = 1e-42
Identities = 100/157 (63%), Positives = 106/157 (67%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALEVNEKLTEESCHRIDAKSNELAGEXXXXX 428
L S KSG+A+GKK GHESE N KGDDG ALEVNEKL EES H IDAKSNELA E
Sbjct: 310 LRSSEKSGQAQGKKAGHESE-NFKGDDGSALEVNEKLNEESSHHIDAKSNELAEEHGSDG 368
Query: 427 XXXXXXXXXXXXXXXXXXXXXXXXXQNNRGSHLGSPKSNVNRGSSVGNAPSNINRVGLGQ 248
QNNRG HLG+P SNVNRGS+V N SNINR G+GQ
Sbjct: 369 QRRGRGQGRGRGKGQGQRRGRPQSHQNNRGGHLGAPISNVNRGSNVRNTLSNINRAGVGQ 428
Query: 247 PVFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIITV 137
PV EQSAA KQSSVP MPDGTKGFSMGRGK MAIIT+
Sbjct: 429 PVLEQSAAPKQSSVPRMPDGTKGFSMGRGKSMAIITM 465
>ref|XP_004244780.1| PREDICTED: uncharacterized protein LOC101259271 [Solanum
lycopersicum]
Length = 456
Score = 171 bits (434), Expect = 1e-40
Identities = 97/157 (61%), Positives = 106/157 (67%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALEVNEKLTEESCHRIDAKSNELAGEXXXXX 428
L S KSG+A+GKK GH+SE N KGDDG ALEVNEKL EES H IDAKSNELA E
Sbjct: 301 LRSSEKSGQAQGKKAGHDSE-NFKGDDGSALEVNEKLNEESRHHIDAKSNELAEEHGSDG 359
Query: 427 XXXXXXXXXXXXXXXXXXXXXXXXXQNNRGSHLGSPKSNVNRGSSVGNAPSNINRVGLGQ 248
QNNRG HLG+P SNVNRGS+V N+ SNI RVG+G+
Sbjct: 360 QRRGRGQGRGRGKGQGQRRGRPQSHQNNRGGHLGAPLSNVNRGSNVRNSLSNIIRVGVGK 419
Query: 247 PVFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIITV 137
PV EQSAAAKQSSVP MPDGTKGFSMGRGK IIT+
Sbjct: 420 PVLEQSAAAKQSSVPRMPDGTKGFSMGRGKSTPIITM 456
>ref|XP_004251985.1| PREDICTED: uncharacterized protein LOC101263189 isoform 2 [Solanum
lycopersicum]
Length = 473
Score = 114 bits (286), Expect = 2e-23
Identities = 72/164 (43%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALEVNEKLTEESCHRIDAKSNELA------G 446
L KSG+AR KKVGHES+ N K DD ALE+NEK +S H +D +SN++A G
Sbjct: 309 LRRAAKSGQARVKKVGHESDPNSKEDDDVALELNEKHDGDSSHHVDVQSNDVAEEHGRVG 368
Query: 445 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNNRGSHLGSPKSNVNRGSSVGNAPSNIN 266
+ Q NRG G + VN GSSV +APS+
Sbjct: 369 KKKGNNRGRGKVQGQGPGQTRGRGRETPQFRQTNRGGRTGGSVTKVNTGSSVASAPSSTG 428
Query: 265 RVGL-GQP-VFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIIT 140
V + GQP V + KQSSVP MPDGTKGFSMGRGKP+A+ T
Sbjct: 429 GVNVTGQPAVVTDQSGGKQSSVPRMPDGTKGFSMGRGKPVAVRT 472
>ref|XP_004251984.1| PREDICTED: uncharacterized protein LOC101263189 isoform 1 [Solanum
lycopersicum]
Length = 506
Score = 114 bits (286), Expect = 2e-23
Identities = 72/164 (43%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALEVNEKLTEESCHRIDAKSNELA------G 446
L KSG+AR KKVGHES+ N K DD ALE+NEK +S H +D +SN++A G
Sbjct: 342 LRRAAKSGQARVKKVGHESDPNSKEDDDVALELNEKHDGDSSHHVDVQSNDVAEEHGRVG 401
Query: 445 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNNRGSHLGSPKSNVNRGSSVGNAPSNIN 266
+ Q NRG G + VN GSSV +APS+
Sbjct: 402 KKKGNNRGRGKVQGQGPGQTRGRGRETPQFRQTNRGGRTGGSVTKVNTGSSVASAPSSTG 461
Query: 265 RVGL-GQP-VFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIIT 140
V + GQP V + KQSSVP MPDGTKGFSMGRGKP+A+ T
Sbjct: 462 GVNVTGQPAVVTDQSGGKQSSVPRMPDGTKGFSMGRGKPVAVRT 505
>ref|XP_004253040.1| PREDICTED: uncharacterized protein LOC101250385 [Solanum
lycopersicum]
Length = 514
Score = 109 bits (273), Expect = 6e-22
Identities = 68/155 (43%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Frame = -3
Query: 595 GKSGEARGKKVGHESEQNIKGDDGFALEVNEKLTEESCHRIDAKSNELAGEXXXXXXXXX 416
GKSG+ RGKK+G+ESE + K DD + E +EK +++ H +DA N+LA E
Sbjct: 363 GKSGQTRGKKIGYESEVSFKEDDTSS-EASEKHSDDLWHHLDAHLNDLAEEHVDGQRKGL 421
Query: 415 XXXXXXXXXXXXXXXXXXXXXQNNRGSHLGSPKSNVNRGSSVGNAPSNINRVGL-GQP-- 245
+RG HL +P +++ R SVG+A S+INR L GQP
Sbjct: 422 NRSWVKGLGQGRGRPQFHQ---TSRGGHLSTPPASMRRAYSVGSALSSINRFSLAGQPSM 478
Query: 244 VFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIIT 140
+ +QSA KQ+SVP MPDGT+GFSMGRGKP+AI T
Sbjct: 479 LSDQSAPVKQTSVPRMPDGTRGFSMGRGKPVAIKT 513
>ref|XP_006342440.1| PREDICTED: la-related protein 6-like [Solanum tuberosum]
Length = 518
Score = 108 bits (269), Expect = 2e-21
Identities = 68/155 (43%), Positives = 91/155 (58%), Gaps = 3/155 (1%)
Frame = -3
Query: 595 GKSGEARGKKVGHESEQNIKGDDGFALEVNEKLTEESCHRIDAKSNELAGEXXXXXXXXX 416
GKSG+ RGKKVG+ESE + K DD + E +EK +++ H +D +LA E
Sbjct: 366 GKSGQIRGKKVGYESEVSFKEDDTSS-EASEKHSDDLWHHLDTHLYDLAEEHGVDGQRKG 424
Query: 415 XXXXXXXXXXXXXXXXXXXXXQNNRGSHLGSPKSNVNRGSSVGNAPSNINRVGL-GQP-- 245
+RG HLG+P++++ R SVG+A S+INR L GQP
Sbjct: 425 LNRSWVKGLGQGRGRPQFHQ--TSRGGHLGTPQASMRRAYSVGSALSSINRFSLAGQPSM 482
Query: 244 VFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIIT 140
+ +QSA KQ+SVP MPDGT+GFSMGRGKP+AI T
Sbjct: 483 LSDQSAPVKQASVPRMPDGTRGFSMGRGKPVAIKT 517
>ref|XP_006353141.1| PREDICTED: uncharacterized protein LOC102593695 [Solanum tuberosum]
Length = 495
Score = 104 bits (259), Expect = 3e-20
Identities = 71/187 (37%), Positives = 88/187 (47%), Gaps = 31/187 (16%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALEVNEKLTEESCHRIDAKSNELA------- 449
L KSG++R KKVGHES+ N K DD ALE+NEK +S H +D +SN++A
Sbjct: 308 LRRTAKSGQSRVKKVGHESDPNFKEDDDVALELNEKHDGDSSHHVDVQSNDVAVSDVAML 367
Query: 448 ----------------------GEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQNNRGS 335
G+ Q NRG
Sbjct: 368 LINQEIFLFLFPFRETEDHSRVGKKKGNNRGRGKVQGQGPGQMRGRGRETPQFRQTNRGG 427
Query: 334 HLGSPKSNVNRGSSVGNAPSNINRVGL-GQP-VFEQSAAAKQSSVPCMPDGTKGFSMGRG 161
G + VN GSSV +A S+ V + GQP V +A KQSSVP MPDGTKGFSMGRG
Sbjct: 428 RTGGSVTKVNTGSSVASASSSTGGVNVAGQPAVVSDQSAGKQSSVPRMPDGTKGFSMGRG 487
Query: 160 KPMAIIT 140
KP+A+ T
Sbjct: 488 KPVAVRT 494
>ref|XP_006442037.1| hypothetical protein CICLE_v10019649mg [Citrus clementina]
gi|557544299|gb|ESR55277.1| hypothetical protein
CICLE_v10019649mg [Citrus clementina]
Length = 536
Score = 67.8 bits (164), Expect = 3e-09
Identities = 55/163 (33%), Positives = 72/163 (44%), Gaps = 7/163 (4%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALE--VNEKLTEESCHRIDAKSNELAGEXXX 434
L K + +GKK GHE E + +D E +NEK ++S + D +S++ GE
Sbjct: 380 LRRGSKPAQVKGKK-GHEGEWQCEEEDTSTSEQHLNEKQPDDSSQQSDVQSHDHTGEEHN 438
Query: 433 XXXXXXXXXXXXXXXXXXXXXXXXXXXQNN---RGSHLGSPKSNV--NRGSSVGNAPSNI 269
NN SH S +N NRG VG PSN
Sbjct: 439 NEKEGGQRKGRNKGRGKGRGRNDRGQYHNNSHHNNSHHNSNHNNHHNNRGHHVGTPPSN- 497
Query: 268 NRVGLGQPVFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIIT 140
N V QP+ KQ P MPDGT+GF+MGRGKP+A+ T
Sbjct: 498 NMVNNEQPMI-----GKQPPGPRMPDGTRGFAMGRGKPVAVNT 535
>ref|XP_002529112.1| lupus la ribonucleoprotein, putative [Ricinus communis]
gi|223531463|gb|EEF33296.1| lupus la ribonucleoprotein,
putative [Ricinus communis]
Length = 524
Score = 64.3 bits (155), Expect = 3e-08
Identities = 53/159 (33%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALEV--NEKLTEESCHRIDAKSNELAGEXXX 434
L K +ARGKK GH+ + + + ++ E NEK E+ + D S+E +GE
Sbjct: 388 LKRASKPTQARGKK-GHDGQGHSEEEEVSTSEQPPNEKQIEDPSQQYDGHSHEHSGEDHV 446
Query: 433 XXXXXXXXXXXXXXXXXXXXXXXXXXXQNNRGSHLGSPKSNV---NRGSSVGNAPSNINR 263
NRG G + NRG+ VG PSN N
Sbjct: 447 NEKDGAQRKG------------------RNRGRGKGRGRGQYHHNNRGNHVGTPPSN-NL 487
Query: 262 VGLGQPVFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAI 146
+ + EQ + AKQ P MPDGTKGF+MGRGKP+A+
Sbjct: 488 I-----INEQPSMAKQPPGPRMPDGTKGFAMGRGKPVAV 521
>gb|EMJ03210.1| hypothetical protein PRUPE_ppa005181mg [Prunus persica]
Length = 473
Score = 63.9 bits (154), Expect = 4e-08
Identities = 51/156 (32%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALE--VNEKLTEESCHRIDAKSNELAGEXXX 434
L K+ + RGKK G + E + +D + E NEK + +S + DA S+E E
Sbjct: 337 LRRVSKAAQVRGKK-GQDGEVQLDEEDASSPEQQANEKQSVDSSQQSDAHSHEHGEEHGN 395
Query: 433 XXXXXXXXXXXXXXXXXXXXXXXXXXXQNNRGSHLGSPKSNVNRGSSVGNAPSNINRVGL 254
+G G N NRG+ VG P N+ VG
Sbjct: 396 DKEVGQRKGRNRG---------------RGKGRGRGQYHHNTNRGNHVGPPPHNL--VGS 438
Query: 253 GQPVFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAI 146
EQ AKQ P MPDGT+GF+MGRGKP+A+
Sbjct: 439 ----IEQPGVAKQPPGPRMPDGTRGFAMGRGKPVAV 470
>gb|EOY06991.1| RNA-binding protein, putative isoform 3 [Theobroma cacao]
Length = 501
Score = 62.8 bits (151), Expect = 9e-08
Identities = 52/159 (32%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALEV--NEKLTEESCHRIDAKSNELAGEXXX 434
L K RGKK GH+ E + + DD E N+K E+ D S+E GE
Sbjct: 360 LRRVSKPTHTRGKK-GHDGEGHYEEDDASTSEQQSNDKQQEDPSQLSDIHSHEYPGEEHS 418
Query: 433 XXXXXXXXXXXXXXXXXXXXXXXXXXXQNN-RGSHLGSPKSNVNRGSSVGNAPSNINRVG 257
Q+N RG+H+G+P S + N SN
Sbjct: 419 NEKEGGQKKGRNRGRGKGRGRAQYHNNQHNSRGNHVGTPPS------ATSNLVSN----- 467
Query: 256 LGQPVFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIIT 140
EQ+ AKQ P MPDGT+GF+MGRGKP+A+ T
Sbjct: 468 ------EQATVAKQPPGPRMPDGTRGFAMGRGKPVAVNT 500
>gb|EOY06990.1| RNA-binding protein, putative isoform 2 [Theobroma cacao]
Length = 431
Score = 62.8 bits (151), Expect = 9e-08
Identities = 52/159 (32%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALEV--NEKLTEESCHRIDAKSNELAGEXXX 434
L K RGKK GH+ E + + DD E N+K E+ D S+E GE
Sbjct: 290 LRRVSKPTHTRGKK-GHDGEGHYEEDDASTSEQQSNDKQQEDPSQLSDIHSHEYPGEEHS 348
Query: 433 XXXXXXXXXXXXXXXXXXXXXXXXXXXQNN-RGSHLGSPKSNVNRGSSVGNAPSNINRVG 257
Q+N RG+H+G+P S + N SN
Sbjct: 349 NEKEGGQKKGRNRGRGKGRGRAQYHNNQHNSRGNHVGTPPS------ATSNLVSN----- 397
Query: 256 LGQPVFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIIT 140
EQ+ AKQ P MPDGT+GF+MGRGKP+A+ T
Sbjct: 398 ------EQATVAKQPPGPRMPDGTRGFAMGRGKPVAVNT 430
>gb|EOY06989.1| RNA-binding protein, putative isoform 1 [Theobroma cacao]
Length = 500
Score = 62.8 bits (151), Expect = 9e-08
Identities = 52/159 (32%), Positives = 68/159 (42%), Gaps = 3/159 (1%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALEV--NEKLTEESCHRIDAKSNELAGEXXX 434
L K RGKK GH+ E + + DD E N+K E+ D S+E GE
Sbjct: 359 LRRVSKPTHTRGKK-GHDGEGHYEEDDASTSEQQSNDKQQEDPSQLSDIHSHEYPGEEHS 417
Query: 433 XXXXXXXXXXXXXXXXXXXXXXXXXXXQNN-RGSHLGSPKSNVNRGSSVGNAPSNINRVG 257
Q+N RG+H+G+P S + N SN
Sbjct: 418 NEKEGGQKKGRNRGRGKGRGRAQYHNNQHNSRGNHVGTPPS------ATSNLVSN----- 466
Query: 256 LGQPVFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAIIT 140
EQ+ AKQ P MPDGT+GF+MGRGKP+A+ T
Sbjct: 467 ------EQATVAKQPPGPRMPDGTRGFAMGRGKPVAVNT 499
>ref|XP_004287183.1| PREDICTED: uncharacterized protein LOC101304608 [Fragaria vesca
subsp. vesca]
Length = 454
Score = 58.2 bits (139), Expect = 2e-06
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Frame = -3
Query: 607 LNSQGKSGEARGKKVGHESEQNIKGDDGFALE---VNEKLTEESCHRIDAKSNELAGEXX 437
L K G+ RGKK G + E ++ +D A E NEK ++++ + DA S+E GE
Sbjct: 312 LRRLSKPGQVRGKK-GQDGEVQLEEEDASAPEQNHANEKQSDDTSRQFDAHSHE-QGEEH 369
Query: 436 XXXXXXXXXXXXXXXXXXXXXXXXXXXXQNNRGSHLGSPKSNVNRGSSVGNAPSNINRVG 257
NNR +H+G+ + SS+G++ + G
Sbjct: 370 GNDKESGQRKARNRQGGRGRGRGRGQYHHNNR-NHVGT-----SHNSSMGSS----EQPG 419
Query: 256 LGQPVFEQSAAAKQSSVPCMPDGTKGFSMGRGKPMAI 146
+G V AKQ P MPDGT+GF+MGRGKP+ +
Sbjct: 420 IGVSV------AKQPPGPRMPDGTRGFAMGRGKPVTV 450