BLASTX nr result
ID: Atropa21_contig00024890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024890
(766 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006347992.1| PREDICTED: pentatricopeptide repeat-containi... 184 3e-44
ref|XP_004229730.1| PREDICTED: pentatricopeptide repeat-containi... 181 2e-43
ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containi... 103 5e-20
emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera] 103 5e-20
ref|XP_002301239.2| pentatricopeptide repeat-containing family p... 100 9e-19
gb|EOX96515.1| Tetratricopeptide repeat (TPR)-like superfamily p... 95 3e-17
ref|XP_006375170.1| pentatricopeptide repeat-containing family p... 94 4e-17
ref|XP_002327026.1| predicted protein [Populus trichocarpa] 94 4e-17
gb|EMJ20170.1| hypothetical protein PRUPE_ppa003822mg [Prunus pe... 93 1e-16
gb|EXB38379.1| hypothetical protein L484_008037 [Morus notabilis] 92 2e-16
ref|XP_004307244.1| PREDICTED: pentatricopeptide repeat-containi... 91 3e-16
ref|XP_006445447.1| hypothetical protein CICLE_v10019658mg [Citr... 89 2e-15
gb|EOX96514.1| Tetratricopeptide repeat (TPR)-like superfamily p... 87 8e-15
ref|XP_006306047.1| hypothetical protein CARUB_v10011354mg [Caps... 82 2e-13
ref|XP_006418504.1| hypothetical protein EUTSA_v10007383mg [Eutr... 81 3e-13
ref|XP_002526471.1| pentatricopeptide repeat-containing protein,... 79 1e-12
ref|XP_004515320.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-12
gb|AFK44508.1| unknown [Medicago truncatula] 79 2e-12
gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana] gi|29028... 79 2e-12
ref|NP_171717.2| pentatricopeptide repeat-containing protein [Ar... 79 2e-12
>ref|XP_006347992.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Solanum tuberosum]
Length = 545
Score = 184 bits (467), Expect = 3e-44
Identities = 93/103 (90%), Positives = 97/103 (94%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
RRISEALSCLKDAVST GSKSWRPKPA VSSILRLCEQEDDTQ+KEALLEVLKQVGCLDD
Sbjct: 443 RRISEALSCLKDAVSTEGSKSWRPKPATVSSILRLCEQEDDTQNKEALLEVLKQVGCLDD 502
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTSDNDEGSEILLNQL*DSL 456
EKYMSYIPLSNG+ TSSEPEIE DTSDN EGS+ILLNQL +SL
Sbjct: 503 EKYMSYIPLSNGTITSSEPEIEKDTSDNGEGSDILLNQLQESL 545
>ref|XP_004229730.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Solanum lycopersicum]
Length = 545
Score = 181 bits (460), Expect = 2e-43
Identities = 92/103 (89%), Positives = 96/103 (93%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
RRISEALSCLKDAVS+ GSKSWRPKPA VSSILRLCEQEDD Q+KE LLEVLKQVGCLDD
Sbjct: 443 RRISEALSCLKDAVSSEGSKSWRPKPATVSSILRLCEQEDDIQNKEVLLEVLKQVGCLDD 502
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTSDNDEGSEILLNQL*DSL 456
EKYMSYIPLSNGSFTSSE EIE DTSDNDEGS+ILLNQL +SL
Sbjct: 503 EKYMSYIPLSNGSFTSSEREIEKDTSDNDEGSDILLNQLQESL 545
>ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 103 bits (258), Expect = 5e-20
Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 8/106 (7%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
++IS+ALSC K AV GS W+PKP NVS+ L LCE+E DT +KEAL+ +L+Q+GCL+D
Sbjct: 417 KKISDALSCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLED 476
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTS--------DNDEGSEILLNQ 471
E Y S L GS T +E E D + D D+G+E+LLNQ
Sbjct: 477 EPYASLFGLHTGSVTGNELSNEKDRTGADKDIDEDEDDGAEMLLNQ 522
>emb|CAN75355.1| hypothetical protein VITISV_002476 [Vitis vinifera]
Length = 736
Score = 103 bits (258), Expect = 5e-20
Identities = 53/106 (50%), Positives = 70/106 (66%), Gaps = 8/106 (7%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
++IS+ALSC K AV GS W+PKP NVS+ L LCE+E DT +KEAL+ +L+Q+GCL+D
Sbjct: 626 KKISDALSCFKRAVLAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLED 685
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTS--------DNDEGSEILLNQ 471
E Y S L GS T +E E D + D D+G+E+LLNQ
Sbjct: 686 EPYASLFGLHTGSVTGNELSNEKDRTGADKDIDEDEDDGAEMLLNQ 731
>ref|XP_002301239.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344984|gb|EEE80512.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 539
Score = 99.8 bits (247), Expect = 9e-19
Identities = 54/109 (49%), Positives = 75/109 (68%), Gaps = 6/109 (5%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
RR SEALSCLK+A +T GSKSW+P PANVSS +LCE+E D SKEAL L+Q G L D
Sbjct: 431 RRTSEALSCLKEAFATPGSKSWKPNPANVSSFFKLCEEEVDMASKEALASFLRQSGHLKD 490
Query: 584 EKY--MSYIPLSNGSFTS----SEPEIENDTSDNDEGSEILLNQL*DSL 456
+ Y + +P++ ++ +E +I+N+ +D D GSE+L++QL SL
Sbjct: 491 KAYALLLGMPVTGDELSTKEERTEDQIDNEENDGDNGSEMLVSQLQGSL 539
>gb|EOX96515.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
[Theobroma cacao] gi|508704620|gb|EOX96516.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 2 [Theobroma cacao]
Length = 420
Score = 94.7 bits (234), Expect = 3e-17
Identities = 50/107 (46%), Positives = 70/107 (65%), Gaps = 8/107 (7%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
+RI +ALSCLKDA +T GS+ WRPKP +VS+ LCE++ D S+E + +L+Q GCL +
Sbjct: 310 KRIPDALSCLKDAFATEGSRGWRPKPTSVSAFFNLCEEKVDMASREVFVGLLRQSGCLKN 369
Query: 584 EKYMSYIPLSNGSFTSSE-PEIENDTS-------DNDEGSEILLNQL 468
E Y S I LS + + SE P +N S + D+GSE+L+NQL
Sbjct: 370 EAYASLIGLSEEALSESELPRDKNRKSSYSSSDENQDDGSEVLINQL 416
>ref|XP_006375170.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550323489|gb|ERP52967.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 539
Score = 94.4 bits (233), Expect = 4e-17
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 6/109 (5%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
RR SEALSCLK+A T GSKSW+P PANV+S +LCE+E D +KEAL L+Q G L D
Sbjct: 431 RRTSEALSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMANKEALEGFLRQSGHLKD 490
Query: 584 EKYMSYI--PLSNGSFTSSE----PEIENDTSDNDEGSEILLNQL*DSL 456
+ Y S + P++ ++ E +I+N+ D D+G+E+L++ L SL
Sbjct: 491 KAYASLLGMPVTGDELSTKEDRTGDQIDNEEDDEDDGAEMLVSHLQGSL 539
>ref|XP_002327026.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 94.4 bits (233), Expect = 4e-17
Identities = 51/109 (46%), Positives = 72/109 (66%), Gaps = 6/109 (5%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
RR SEALSCLK+A T GSKSW+P PANV+S +LCE+E D +KEAL L+Q G L D
Sbjct: 431 RRTSEALSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMANKEALEGFLRQSGHLKD 490
Query: 584 EKYMSYI--PLSNGSFTSSE----PEIENDTSDNDEGSEILLNQL*DSL 456
+ Y S + P++ ++ E +I+N+ D D+G+E+L++ L SL
Sbjct: 491 KAYASLLGMPVTGDELSTKEDGTGDQIDNEEDDEDDGAEMLVSHLQGSL 539
>gb|EMJ20170.1| hypothetical protein PRUPE_ppa003822mg [Prunus persica]
Length = 546
Score = 92.8 bits (229), Expect = 1e-16
Identities = 52/109 (47%), Positives = 71/109 (65%), Gaps = 10/109 (9%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
+RISEALSC K+A S GSKSWRPKP NVS+ L LCEQE ++ SKE + +LKQ G L +
Sbjct: 433 QRISEALSCWKEAFSAEGSKSWRPKPVNVSAFLELCEQEANSVSKEFFMGLLKQSGQLKN 492
Query: 584 EKYMSYIPLSNGSFTSSEPEIEND----TSDND------EGSEILLNQL 468
+ Y S I L++ + + ++ D T D+D +GSE+LLN+L
Sbjct: 493 KSYASLIGLADEDVSDDDLSLKKDRTNITKDDDDEKEAGDGSELLLNEL 541
>gb|EXB38379.1| hypothetical protein L484_008037 [Morus notabilis]
Length = 546
Score = 92.0 bits (227), Expect = 2e-16
Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 6/105 (5%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
RRISEALS K+A + G+K+WRPKP NVS+ L LCEQE D + KE L+ +L++ G L D
Sbjct: 438 RRISEALSYWKEAFAAEGAKNWRPKPVNVSAFLDLCEQEADLECKEVLVGLLREAGYLKD 497
Query: 584 EKYMSYI-----PLSNGSFTSSEPEIENDTSDN-DEGSEILLNQL 468
+ Y S++ +++ TS + END +N D+ S IL NQL
Sbjct: 498 QSYASFVGFSHEAINDNGITSVDVSFENDNDENKDDESGILFNQL 542
>ref|XP_004307244.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Fragaria vesca subsp. vesca]
Length = 541
Score = 91.3 bits (225), Expect = 3e-16
Identities = 51/111 (45%), Positives = 69/111 (62%), Gaps = 8/111 (7%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
+RISEALSC K+A GSKSWRPKP NV++ CEQE D +SKE L +L+Q G L +
Sbjct: 431 KRISEALSCWKEAFMAEGSKSWRPKPVNVTTFYEFCEQEGDLRSKEIFLGLLRQSGQLKN 490
Query: 584 EKYMSYIPLSNGSFTSSEPEIE----NDTSDNDE----GSEILLNQL*DSL 456
+ Y + LS+ + ++ +E ND D DE GS++LLNQL +L
Sbjct: 491 KSYALLVGLSDEDSSDNDISLEKDSINDNQDGDEKSDDGSDMLLNQLHSTL 541
>ref|XP_006445447.1| hypothetical protein CICLE_v10019658mg [Citrus clementina]
gi|568819745|ref|XP_006464406.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g02150-like [Citrus sinensis]
gi|557547709|gb|ESR58687.1| hypothetical protein
CICLE_v10019658mg [Citrus clementina]
Length = 535
Score = 88.6 bits (218), Expect = 2e-15
Identities = 49/99 (49%), Positives = 67/99 (67%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
RRI EALSCLK A + G+KSWRPKP NV + + CE+E D SKEA + +L+Q G +
Sbjct: 436 RRILEALSCLKGAFAAEGAKSWRPKPVNVINFFKACEEESDMGSKEAFVALLRQPGYRKE 495
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTSDNDEGSEILLNQL 468
+ YMS I L++ + +E +ND D+DE SE+LL+QL
Sbjct: 496 KDYMSLIGLTDEAV--AENNKKND-EDSDEDSEMLLSQL 531
>gb|EOX96514.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
[Theobroma cacao]
Length = 549
Score = 86.7 bits (213), Expect = 8e-15
Identities = 46/102 (45%), Positives = 65/102 (63%), Gaps = 8/102 (7%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
+RI +ALSCLKDA +T GS+ WRPKP +VS+ LCE++ D S+E + +L+Q GCL +
Sbjct: 431 KRIPDALSCLKDAFATEGSRGWRPKPTSVSAFFNLCEEKVDMASREVFVGLLRQSGCLKN 490
Query: 584 EKYMSYIPLSNGSFTSSE-PEIENDTS-------DNDEGSEI 483
E Y S I LS + + SE P +N S + D+GSE+
Sbjct: 491 EAYASLIGLSEEALSESELPRDKNRKSSYSSSDENQDDGSEV 532
>ref|XP_006306047.1| hypothetical protein CARUB_v10011354mg [Capsella rubella]
gi|482574758|gb|EOA38945.1| hypothetical protein
CARUB_v10011354mg [Capsella rubella]
Length = 524
Score = 82.4 bits (202), Expect = 2e-13
Identities = 44/101 (43%), Positives = 64/101 (63%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
R I EAL+CL+ A S GS +WRPK +S +LCE+E D SKEA+LE+L+Q G L D
Sbjct: 427 RCIPEALTCLRKAFSAEGSSNWRPKVLMLSGFFKLCEEESDITSKEAVLELLRQAGHLQD 486
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTSDNDEGSEILLNQL*D 462
+ Y + I + ++ END ++D G+++LL+QL D
Sbjct: 487 KSYQALIDVDENRTVNNS---ENDAHESD-GTDVLLSQLQD 523
>ref|XP_006418504.1| hypothetical protein EUTSA_v10007383mg [Eutrema salsugineum]
gi|557096275|gb|ESQ36857.1| hypothetical protein
EUTSA_v10007383mg [Eutrema salsugineum]
Length = 517
Score = 81.3 bits (199), Expect = 3e-13
Identities = 43/103 (41%), Positives = 61/103 (59%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
R I+EAL+CLK+A S GS +WRPK +S +LCE+E D SKEA+LE+L+Q G L D
Sbjct: 427 RNITEALTCLKEAFSAEGSSNWRPKVFMLSGFFKLCEEESDVASKEAVLELLRQSGHLQD 486
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTSDNDEGSEILLNQL*DSL 456
+ Y + I + ++ EG+++LL QL D L
Sbjct: 487 KSYQALI------------DDAQESESESEGTDVLLTQLQDDL 517
>ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534146|gb|EEF35862.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 79.3 bits (194), Expect = 1e-12
Identities = 48/102 (47%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
+RISEALSC K+A GSKSW+PKP +SS +LCE+E D S L ++L Q G L+D
Sbjct: 431 KRISEALSCFKEAFLAQGSKSWKPKPVIISSFFKLCEEEADMASTGVLEDLLAQSGYLED 490
Query: 584 EKYMSYIPLSNGSFTSSEPEIEND-TSDND--EGSEILLNQL 468
+ Y S I S S+E E D T D + E +E LNQL
Sbjct: 491 KTYASLI---GSSVPSNELSTEKDRTGDRNEVEENETFLNQL 529
>ref|XP_004515320.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cicer arietinum]
Length = 543
Score = 79.0 bits (193), Expect = 2e-12
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 5/104 (4%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
+R+S+ALSCLK A T GSKSW+PKP + + +LC +D+ +S E L+E+LK+ G D
Sbjct: 437 KRVSDALSCLKKAFMTSGSKSWKPKPIKLLAFFKLCRDQDNMESAEVLIELLKKSGYDKD 496
Query: 584 EKYMSYI---PLSNGSFTSSEPE--IENDTSDNDEGSEILLNQL 468
E + S I LSN T + ++N+ D+D+ S +L NQ+
Sbjct: 497 EAFASLIGEDELSNRMETVDRTDDIVDNENMDDDD-SHVLFNQV 539
>gb|AFK44508.1| unknown [Medicago truncatula]
Length = 244
Score = 79.0 bits (193), Expect = 2e-12
Identities = 37/99 (37%), Positives = 64/99 (64%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
+R+SEALSCL+ A T SKSW+PKP +++ L+LC+ EDD +S + L+E+L++ G +D
Sbjct: 142 KRVSEALSCLEKAFMTSDSKSWKPKPIKLAAFLKLCQDEDDMESAKVLIELLRKPGYHND 201
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTSDNDEGSEILLNQL 468
E Y + I S + + + + +D+ S++L +Q+
Sbjct: 202 EAYAALISKDEPSNRTERIDDVDSENMDDDDSQVLFSQV 240
>gb|AAM19786.1| At1g02150/T7I23.8 [Arabidopsis thaliana] gi|29028736|gb|AAO64747.1|
At1g02150/T7I23.8 [Arabidopsis thaliana]
Length = 524
Score = 78.6 bits (192), Expect = 2e-12
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
R ISEAL+CL++A S GS +WRPK +S +LCE+E D SKEA+LE+L+Q G L+D
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTSDNDE----GSEILLNQL*DSL 456
+ Y++ I + EN T +N E ++ LL QL D L
Sbjct: 489 KSYLALIDVD-----------ENRTVNNSEIDAHETDALLTQLQDDL 524
>ref|NP_171717.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806400|sp|Q8LPS6.2|PPR3_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g02150 gi|2317908|gb|AAC24372.1| Unknown protein
[Arabidopsis thaliana] gi|332189272|gb|AEE27393.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 524
Score = 78.6 bits (192), Expect = 2e-12
Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%)
Frame = -3
Query: 764 RRISEALSCLKDAVSTLGSKSWRPKPANVSSILRLCEQEDDTQSKEALLEVLKQVGCLDD 585
R ISEAL+CL++A S GS +WRPK +S +LCE+E D SKEA+LE+L+Q G L+D
Sbjct: 429 RCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLELLRQSGDLED 488
Query: 584 EKYMSYIPLSNGSFTSSEPEIENDTSDNDE----GSEILLNQL*DSL 456
+ Y++ I + EN T +N E ++ LL QL D L
Sbjct: 489 KSYLALIDVD-----------ENRTVNNSEIDAHETDALLTQLQDDL 524