BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00024836
         (874 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252...   280   5e-73
ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263...   278   2e-72
ref|XP_006348624.1| PREDICTED: transcription initiation factor T...   276   7e-72
ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207...   236   1e-59
gb|EOY32427.1| Transcription initiation factor TFIID subunit 11 ...   232   1e-58
ref|XP_002277017.1| PREDICTED: transcription initiation factor T...   232   2e-58
ref|XP_002299376.1| transcription initiation factor IID 28 kDa s...   228   2e-57
ref|XP_002532706.1| Transcription initiation factor TFIID subuni...   226   1e-56
gb|EMJ13178.1| hypothetical protein PRUPE_ppa010895mg [Prunus pe...   225   1e-56
ref|XP_006468615.1| PREDICTED: transcription initiation factor T...   223   6e-56
ref|XP_006468617.1| PREDICTED: transcription initiation factor T...   222   2e-55
ref|XP_006448556.1| hypothetical protein CICLE_v10016661mg [Citr...   221   4e-55
ref|NP_001043872.2| Os01g0680400 [Oryza sativa Japonica Group] g...   219   1e-54
gb|EEC71272.1| hypothetical protein OsI_03273 [Oryza sativa Indi...   218   3e-54
gb|EXB56450.1| Transcription initiation factor TFIID subunit 11 ...   216   7e-54
ref|XP_006468616.1| PREDICTED: transcription initiation factor T...   216   1e-53
ref|NP_193761.1| TBP-associated factor 11 [Arabidopsis thaliana]...   216   1e-53
ref|XP_003569565.1| PREDICTED: transcription initiation factor T...   215   2e-53
ref|XP_006285330.1| hypothetical protein CARUB_v10006719mg [Caps...   214   4e-53
gb|AFK44701.1| unknown [Medicago truncatula]                          213   6e-53

>ref|XP_004239004.1| PREDICTED: uncharacterized protein LOC101252686 [Solanum
           lycopersicum]
          Length = 210

 Score =  280 bits (716), Expect = 5e-73
 Identities = 148/211 (70%), Positives = 169/211 (80%), Gaps = 1/211 (0%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALN-DVHGGDAANNNPGPENRLTSR 213
           MK SK+ FEA  EE + SP ESP G DENE +DQ A+  +++ GD  N +   E   TS+
Sbjct: 1   MKRSKDPFEATFEEQDDSPPESPAGTDENEGQDQGAVGVNMNEGDDVNTD-SREKPSTSK 59

Query: 214 NIPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQFTEEQMSR 393
              +S  T GP SK K         +MDVQLGK +SSSDPDKL+KMQSILSQFTEEQMSR
Sbjct: 60  ATSVSVSTAGPISKPKEEDEEEEEESMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSR 119

Query: 394 YESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMAERKDT 573
           YESFRRSGFQKSNMK+LLT+ITG++KISIPMTIVVSGIAK+FVGEL+ETA+MVMAERKDT
Sbjct: 120 YESFRRSGFQKSNMKRLLTNITGSAKISIPMTIVVSGIAKMFVGELIETAKMVMAERKDT 179

Query: 574 GPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           GPIRPCH+REAYRRLKLEGKIPK SVPRLFR
Sbjct: 180 GPIRPCHIREAYRRLKLEGKIPKKSVPRLFR 210


>ref|XP_004239262.1| PREDICTED: uncharacterized protein LOC101263908 [Solanum
           lycopersicum]
          Length = 210

 Score =  278 bits (711), Expect = 2e-72
 Identities = 147/211 (69%), Positives = 168/211 (79%), Gaps = 1/211 (0%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALN-DVHGGDAANNNPGPENRLTSR 213
           MK SK+ FEA  EE + SP ESP G DENE +D  A+  +++ GD  N +   E   TS+
Sbjct: 1   MKRSKDPFEATFEEQDDSPPESPAGTDENEGQDHGAVGVNMNEGDDVNTD-SREKPSTSK 59

Query: 214 NIPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQFTEEQMSR 393
              +S  T GP SK K         +MDVQLGK +SSSDPDKL+KMQSILSQFTEEQMSR
Sbjct: 60  ATSVSVSTAGPISKPKEEDEEEEEESMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSR 119

Query: 394 YESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMAERKDT 573
           YESFRRSGFQKSNMK+LLT+ITG++KISIPMTIVVSGIAK+FVGEL+ETA+MVMAERKDT
Sbjct: 120 YESFRRSGFQKSNMKRLLTNITGSAKISIPMTIVVSGIAKMFVGELIETAKMVMAERKDT 179

Query: 574 GPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           GPIRPCH+REAYRRLKLEGKIPK SVPRLFR
Sbjct: 180 GPIRPCHIREAYRRLKLEGKIPKKSVPRLFR 210


>ref|XP_006348624.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
           isoform X1 [Solanum tuberosum]
           gi|565363815|ref|XP_006348625.1| PREDICTED:
           transcription initiation factor TFIID subunit 11-like
           isoform X2 [Solanum tuberosum]
           gi|565363817|ref|XP_006348626.1| PREDICTED:
           transcription initiation factor TFIID subunit 11-like
           isoform X3 [Solanum tuberosum]
          Length = 210

 Score =  276 bits (706), Expect = 7e-72
 Identities = 145/210 (69%), Positives = 163/210 (77%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLTSRN 216
           MK SK+ FEA  EE + SP ESP G DENE +DQ A+          N    E   TS+ 
Sbjct: 1   MKRSKDPFEATFEEQDDSPPESPAGTDENEGQDQGAVGVNMNESDDVNTDSREKPSTSKA 60

Query: 217 IPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQFTEEQMSRY 396
             +S  T GP SK K         +MDVQLGK +SSSDPDKL+KMQSILSQFTEEQMSRY
Sbjct: 61  TSVSVSTAGPISKPKEEDEEEEEESMDVQLGKLSSSSDPDKLAKMQSILSQFTEEQMSRY 120

Query: 397 ESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMAERKDTG 576
           ESFRRSGFQKSNMK+LL++ITG++KISIPMTIVVSGIAK+FVGEL+ETA+MVMAERKDTG
Sbjct: 121 ESFRRSGFQKSNMKRLLSNITGSAKISIPMTIVVSGIAKMFVGELIETAKMVMAERKDTG 180

Query: 577 PIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           PIRPCH+REAYRRLKLEGKIPK SVPRLFR
Sbjct: 181 PIRPCHIREAYRRLKLEGKIPKKSVPRLFR 210


>ref|XP_004147964.1| PREDICTED: uncharacterized protein LOC101207528 [Cucumis sativus]
           gi|449494264|ref|XP_004159496.1| PREDICTED:
           uncharacterized protein LOC101229675 [Cucumis sativus]
          Length = 220

 Score =  236 bits (601), Expect = 1e-59
 Identities = 126/220 (57%), Positives = 151/220 (68%), Gaps = 10/220 (4%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLTSRN 216
           MK SK+ FEA  EE E SP  SP   D+ E     A +     D  + +  P++   + +
Sbjct: 1   MKQSKDPFEAAFEEQEESPPNSPSAADDLEIPTTVAPSPADAFDLQDGDDDPKSASVATH 60

Query: 217 IPISAGTTG----------PSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILS 366
               A TT            + K K         N++V+L KF SS DPDK++KMQ+ILS
Sbjct: 61  SVAPASTTSMFVSSSSHVSTAPKTKEDDEEEEEENVEVELAKFPSSGDPDKMAKMQAILS 120

Query: 367 QFTEEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETAR 546
           QFTEEQMSRYESFRR+GFQK+NMK+LL SI+G  KIS+PMTIVVSGIAK+FVGELVETAR
Sbjct: 121 QFTEEQMSRYESFRRAGFQKANMKRLLASISGTQKISVPMTIVVSGIAKMFVGELVETAR 180

Query: 547 MVMAERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           +VM ER DTGPIRPCH+REAYRRLKLEGKIP+ SVPRLFR
Sbjct: 181 VVMTERNDTGPIRPCHLREAYRRLKLEGKIPRKSVPRLFR 220


>gb|EOY32427.1| Transcription initiation factor TFIID subunit 11 isoform 1
           [Theobroma cacao]
          Length = 225

 Score =  232 bits (592), Expect = 1e-58
 Identities = 125/224 (55%), Positives = 156/224 (69%), Gaps = 15/224 (6%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHG-----------GDAANNN 183
           MK SK+ FEA +EE E SP +SP+G DE +++ Q      H            G   NN 
Sbjct: 1   MKQSKDPFEAALEEQEESPPDSPIGQDELDSQTQNQTPTGHHTLVDDDDYDEIGTNTNNP 60

Query: 184 PGPENRLT----SRNIPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKM 351
             P +  T    + ++  +  +   +SK K         N+DV+LGKF SS+DP K++KM
Sbjct: 61  SHPSSNSTPMLLTPSVNANVASAAAASKNKEYDDDEEEENVDVELGKFPSSADPAKMAKM 120

Query: 352 QSILSQFTEEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGEL 531
           Q+ILSQFTE+QMSRYESFRRS  QKSNM++LL SITG+ KIS+PMTIVV GIAK++VGEL
Sbjct: 121 QAILSQFTEDQMSRYESFRRSALQKSNMRRLLVSITGSQKISLPMTIVVCGIAKMYVGEL 180

Query: 532 VETARMVMAERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLF 663
           VETARMVM ERK++GPIRPCH+REAYRRLKLEGK+PK SV RLF
Sbjct: 181 VETARMVMTERKESGPIRPCHIREAYRRLKLEGKVPKKSVQRLF 224


>ref|XP_002277017.1| PREDICTED: transcription initiation factor TFIID subunit 11 [Vitis
           vinifera] gi|296086768|emb|CBI32917.3| unnamed protein
           product [Vitis vinifera]
          Length = 198

 Score =  232 bits (591), Expect = 2e-58
 Identities = 128/210 (60%), Positives = 148/210 (70%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLTSRN 216
           MK SK+ FE   EE   SP +SPV        ++     +   D AN N  P +  T   
Sbjct: 1   MKQSKDPFEVAFEES--SPPDSPV--------EEIVGGQIEDEDDANVNVHPTS--TPSA 48

Query: 217 IPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQFTEEQMSRY 396
            P S  T  P++K K         NMDV+LGK  +S DP K++KMQ+ILSQFTEEQMSRY
Sbjct: 49  APSSGTTVPPTAKSKDEDEEEEEENMDVELGKLPTSGDPHKMAKMQAILSQFTEEQMSRY 108

Query: 397 ESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMAERKDTG 576
           ESFRRSGFQK+NMKKLL SITG+ KIS PMTIV SGIAK+FVGELVETARMVM ERK+TG
Sbjct: 109 ESFRRSGFQKANMKKLLVSITGSQKISAPMTIVASGIAKMFVGELVETARMVMTERKETG 168

Query: 577 PIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           PIRPCH+REAYRRLKLEGK+P+ SV RLFR
Sbjct: 169 PIRPCHIREAYRRLKLEGKVPRRSVSRLFR 198


>ref|XP_002299376.1| transcription initiation factor IID 28 kDa subunit family protein
           [Populus trichocarpa] gi|222846634|gb|EEE84181.1|
           transcription initiation factor IID 28 kDa subunit
           family protein [Populus trichocarpa]
          Length = 222

 Score =  228 bits (582), Expect = 2e-57
 Identities = 127/223 (56%), Positives = 155/223 (69%), Gaps = 13/223 (5%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQ---AALNDVHG----------GDAAN 177
           MK SK+ FEA   E E SP ESPV  D+ +T+     AA +D  G          G    
Sbjct: 1   MKQSKDPFEAAYVEQEESPPESPVAQDDYDTQASNAAAAADDSQGAVVGQDDDDLGGGGR 60

Query: 178 NNPGPENRLTSRNIPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQS 357
           N+    +   S + P+  G+    +K K         NMDV+L K AS++DPDK++KMQ+
Sbjct: 61  NDFAHSSDHPSASRPM-LGSARSKAKNKDDDEEEEEDNMDVELSKLASTADPDKMAKMQT 119

Query: 358 ILSQFTEEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVE 537
           IL+QFTE QMSRYESFRRS  QK+NMK+LL SITG+ KIS+PMTIVV GIAK+FVGELVE
Sbjct: 120 ILAQFTEGQMSRYESFRRSALQKTNMKRLLVSITGSQKISLPMTIVVCGIAKMFVGELVE 179

Query: 538 TARMVMAERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           TAR+VM ERK++GPIRPCH+REAYRRLKLEGK+PK SVPRLFR
Sbjct: 180 TARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 222


>ref|XP_002532706.1| Transcription initiation factor TFIID subunit, putative [Ricinus
           communis] gi|223527552|gb|EEF29673.1| Transcription
           initiation factor TFIID subunit, putative [Ricinus
           communis]
          Length = 205

 Score =  226 bits (575), Expect = 1e-56
 Identities = 123/216 (56%), Positives = 153/216 (70%)
 Frame = +1

Query: 19  FNSRQSMKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPEN 198
           F   ++MK SK+ FEA  EE E +P ESP+G DE   + Q A       DAA      + 
Sbjct: 4   FIKSRAMKQSKDPFEAAYEEQEETPPESPLGADEL-LDSQTAATTAQDPDAAVLQEDDD- 61

Query: 199 RLTSRNIPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQFTE 378
                      G++G  S+ +         N+DV+L KF S++DPDK++KMQ+ILSQFTE
Sbjct: 62  ----------IGSSGGGSREEFDEEEEE--NVDVELAKFPSTADPDKMAKMQAILSQFTE 109

Query: 379 EQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMA 558
            QM+RYESFRRS  QK+NM++LL SITG+ KIS+PMTIVV GIAK+FVGELVETAR+VM 
Sbjct: 110 NQMTRYESFRRSALQKANMRRLLVSITGSQKISLPMTIVVCGIAKMFVGELVETARIVMT 169

Query: 559 ERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           ERK++GPIRPCH+REAYRRLKLEGK+PK SVPRLFR
Sbjct: 170 ERKESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 205


>gb|EMJ13178.1| hypothetical protein PRUPE_ppa010895mg [Prunus persica]
          Length = 231

 Score =  225 bits (574), Expect = 1e-56
 Identities = 126/231 (54%), Positives = 155/231 (67%), Gaps = 21/231 (9%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLD------ENETEDQAALNDVHGGD--------AA 174
           M  SK+ FEA  EE E SP +SP   D      + + +D   L      D        AA
Sbjct: 1   MDQSKDPFEAAFEEQEDSPPDSPAAPDAARTAPDTQEDDDPLLLPPGSKDPSSSATPLAA 60

Query: 175 NNNPGPENRLTSRNIPISAGTTGPSSKI-------KXXXXXXXXXNMDVQLGKFASSSDP 333
              P P   +T+     +A T  PS+         K         NMDV+LGKF+++ DP
Sbjct: 61  PPPPPPTTAVTTARTTPAATTAAPSTSARAVVKHNKDDDDDEDEENMDVELGKFSATGDP 120

Query: 334 DKLSKMQSILSQFTEEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAK 513
           DK++KMQ+ILS+F+EEQMSRYESFRR+GFQKSNMK+LL SI+G  KIS+PMTIVVSGIAK
Sbjct: 121 DKMAKMQAILSRFSEEQMSRYESFRRAGFQKSNMKRLLGSISGTPKISMPMTIVVSGIAK 180

Query: 514 LFVGELVETARMVMAERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           +FVGELVETAR+VM ERK++GPIRPCH+REAYRRLKLEGK+PK S+ RLFR
Sbjct: 181 MFVGELVETARIVMTERKESGPIRPCHIREAYRRLKLEGKVPKRSMSRLFR 231


>ref|XP_006468615.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
           isoform X1 [Citrus sinensis]
          Length = 216

 Score =  223 bits (569), Expect = 6e-56
 Identities = 127/219 (57%), Positives = 154/219 (70%), Gaps = 7/219 (3%)
 Frame = +1

Query: 31  QSMKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLTS 210
           Q MK SK+ FEA +EE   SP +SP   DE E E Q       G   A      E+   +
Sbjct: 5   QRMKQSKDPFEAALEE---SPGDSP---DELEIETQPQTGTAAGSATAAVTGELEDEFDN 58

Query: 211 --RNIPISAGTTGPSSKI-----KXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQ 369
                P+S  + GP++K+     K         N+DV+LGKF SSSDP K++KMQ+IL+Q
Sbjct: 59  LESQAPMSV-SAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQ 117

Query: 370 FTEEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARM 549
           FTE+QM+RYESFRRS  QKSNM++LL SITG+ KIS+PMTIVV GIAK+FVGELVETARM
Sbjct: 118 FTEDQMNRYESFRRSALQKSNMRRLLVSITGSQKISLPMTIVVCGIAKMFVGELVETARM 177

Query: 550 VMAERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           VM ER ++GPIRPCH+REAYRRLKLEGK+PK SVPRLFR
Sbjct: 178 VMTERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 216


>ref|XP_006468617.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
           isoform X3 [Citrus sinensis]
          Length = 210

 Score =  222 bits (565), Expect = 2e-55
 Identities = 126/217 (58%), Positives = 153/217 (70%), Gaps = 7/217 (3%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLTS-- 210
           MK SK+ FEA +EE   SP +SP   DE E E Q       G   A      E+   +  
Sbjct: 1   MKQSKDPFEAALEE---SPGDSP---DELEIETQPQTGTAAGSATAAVTGELEDEFDNLE 54

Query: 211 RNIPISAGTTGPSSKI-----KXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQFT 375
              P+S  + GP++K+     K         N+DV+LGKF SSSDP K++KMQ+IL+QFT
Sbjct: 55  SQAPMSV-SAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQFT 113

Query: 376 EEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVM 555
           E+QM+RYESFRRS  QKSNM++LL SITG+ KIS+PMTIVV GIAK+FVGELVETARMVM
Sbjct: 114 EDQMNRYESFRRSALQKSNMRRLLVSITGSQKISLPMTIVVCGIAKMFVGELVETARMVM 173

Query: 556 AERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
            ER ++GPIRPCH+REAYRRLKLEGK+PK SVPRLFR
Sbjct: 174 TERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 210


>ref|XP_006448556.1| hypothetical protein CICLE_v10016661mg [Citrus clementina]
           gi|557551167|gb|ESR61796.1| hypothetical protein
           CICLE_v10016661mg [Citrus clementina]
          Length = 216

 Score =  221 bits (562), Expect = 4e-55
 Identities = 126/218 (57%), Positives = 150/218 (68%), Gaps = 6/218 (2%)
 Frame = +1

Query: 31  QSMKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLTS 210
           Q MK SK+ FEA +EE   SP +SP   DE E E Q       G   A      E+   +
Sbjct: 5   QRMKQSKDPFEAALEE---SPGDSP---DELEIETQPQTGTAAGSATAAVTGELEDEFDN 58

Query: 211 --RNIPISAGTTGPS----SKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQF 372
                P+S      +    SK K         N+DV+LGKF SSSDP K++KMQ+IL+QF
Sbjct: 59  LESQAPMSVSADPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQF 118

Query: 373 TEEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMV 552
           TE+QM+RYESFRRS  QKSNM++LL SITG+ KIS+PMTIVV GIAK+FVGELVETARMV
Sbjct: 119 TEDQMNRYESFRRSALQKSNMRRLLVSITGSQKISLPMTIVVCGIAKMFVGELVETARMV 178

Query: 553 MAERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           M ER ++GPIRPCH+REAYRRLKLEGK+PK SVPRLFR
Sbjct: 179 MMERNESGPIRPCHIREAYRRLKLEGKVPKRSVPRLFR 216


>ref|NP_001043872.2| Os01g0680400 [Oryza sativa Japonica Group]
           gi|56202157|dbj|BAD73490.1| transcription initiation
           factor IID p30 beta chain-like [Oryza sativa Japonica
           Group] gi|56202287|dbj|BAD73746.1| transcription
           initiation factor IID p30 beta chain-like [Oryza sativa
           Japonica Group] gi|215695424|dbj|BAG90663.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222619047|gb|EEE55179.1| hypothetical protein
           OsJ_03014 [Oryza sativa Japonica Group]
           gi|255673555|dbj|BAF05786.2| Os01g0680400 [Oryza sativa
           Japonica Group]
          Length = 211

 Score =  219 bits (557), Expect = 1e-54
 Identities = 126/217 (58%), Positives = 152/217 (70%), Gaps = 11/217 (5%)
 Frame = +1

Query: 49  KNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLT-SRNIPI 225
           K+ FEA +EE E SP ESP   +E+      A     G D A+ + GP  RL  SR  P 
Sbjct: 2   KDPFEAAVEEQE-SPPESPAANEED------AAGAPEGYDGASGSRGPPLRLPPSRAAPS 54

Query: 226 SAGTTGPSS---------KIKXXXXXXXXXNMDVQLGKFAS-SSDPDKLSKMQSILSQFT 375
            +G    ++         K +         +M+V L K  S +SDPDKL+KM +ILSQFT
Sbjct: 55  GSGGAAAAAARGKVVRVQKEQQEEEDDEEDHMEVDLDKLPSGTSDPDKLAKMNAILSQFT 114

Query: 376 EEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVM 555
           E+QM+RYESFRRSGFQKSNMKKLL SITG+ KIS+P TIVVSGIAK+FVGELVETAR+VM
Sbjct: 115 EDQMNRYESFRRSGFQKSNMKKLLASITGSQKISLPTTIVVSGIAKMFVGELVETARIVM 174

Query: 556 AERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
            ERKD+GP+RPCH+REAYRRLKLEGKIP+ +VPRLFR
Sbjct: 175 TERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRLFR 211


>gb|EEC71272.1| hypothetical protein OsI_03273 [Oryza sativa Indica Group]
          Length = 210

 Score =  218 bits (554), Expect = 3e-54
 Identities = 125/216 (57%), Positives = 152/216 (70%), Gaps = 10/216 (4%)
 Frame = +1

Query: 49  KNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLT-SRNIPI 225
           K+ FEA +EE E SP ESP   +E+      A     G D A+ + GP  RL  SR  P 
Sbjct: 2   KDPFEAAVEEQE-SPPESPAANEED------AAGAPEGYDGASGSRGPPLRLPPSRAAPS 54

Query: 226 SAGTTGPSS--------KIKXXXXXXXXXNMDVQLGKFAS-SSDPDKLSKMQSILSQFTE 378
            +G    ++        + +         +M+V L K  S +SDPDKL+KM +ILSQFTE
Sbjct: 55  GSGGAAAAAARGKVVRVQEQQEEEDDEEDHMEVDLDKLPSGTSDPDKLAKMNAILSQFTE 114

Query: 379 EQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMA 558
           +QM+RYESFRRSGFQKSNMKKLL SITG+ KIS+P TIVVSGIAK+FVGELVETAR+VM 
Sbjct: 115 DQMNRYESFRRSGFQKSNMKKLLASITGSQKISLPTTIVVSGIAKMFVGELVETARIVMT 174

Query: 559 ERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           ERKD+GP+RPCH+REAYRRLKLEGKIP+ +VPRLFR
Sbjct: 175 ERKDSGPVRPCHIREAYRRLKLEGKIPRRTVPRLFR 210


>gb|EXB56450.1| Transcription initiation factor TFIID subunit 11 [Morus notabilis]
          Length = 253

 Score =  216 bits (551), Expect = 7e-54
 Identities = 119/202 (58%), Positives = 149/202 (73%), Gaps = 3/202 (1%)
 Frame = +1

Query: 70  IEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNP---GPENRLTSRNIPISAGTT 240
           I   E  P   P   D+ + +D   L  V  GD ++++     P N  T+ ++P S+   
Sbjct: 55  ISNSESIPNPPPEENDDGD-DDNTVLPVVISGDPSSSSSLSAVPANS-TAPSLPSSSRGA 112

Query: 241 GPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQFTEEQMSRYESFRRSGF 420
             + +           +M+V+L KF SS+DPDK++KMQ+ILSQFTEEQMSRYESFRR+GF
Sbjct: 113 HKTHR-DDNEEEEEEEHMEVELDKFPSSADPDKMAKMQAILSQFTEEQMSRYESFRRAGF 171

Query: 421 QKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMAERKDTGPIRPCHMR 600
           QKSNMK+LLTSITG  KISIPMTIVVSGIAK+FVGELVETAR+VM+ERK++GP+RPCH+R
Sbjct: 172 QKSNMKRLLTSITGTQKISIPMTIVVSGIAKIFVGELVETARIVMSERKESGPVRPCHIR 231

Query: 601 EAYRRLKLEGKIPKGSVPRLFR 666
           EAYRRLKLEGK+PK SVPRLFR
Sbjct: 232 EAYRRLKLEGKVPKRSVPRLFR 253


>ref|XP_006468616.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
           isoform X2 [Citrus sinensis]
          Length = 213

 Score =  216 bits (549), Expect = 1e-53
 Identities = 123/215 (57%), Positives = 150/215 (69%), Gaps = 7/215 (3%)
 Frame = +1

Query: 31  QSMKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLTS 210
           Q MK SK+ FEA +EE   SP +SP   DE E E Q       G   A      E+   +
Sbjct: 5   QRMKQSKDPFEAALEE---SPGDSP---DELEIETQPQTGTAAGSATAAVTGELEDEFDN 58

Query: 211 --RNIPISAGTTGPSSKI-----KXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQ 369
                P+S  + GP++K+     K         N+DV+LGKF SSSDP K++KMQ+IL+Q
Sbjct: 59  LESQAPMSV-SAGPAAKMTMSKNKDEYDEEDDENVDVELGKFPSSSDPAKMAKMQAILNQ 117

Query: 370 FTEEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARM 549
           FTE+QM+RYESFRRS  QKSNM++LL SITG+ KIS+PMTIVV GIAK+FVGELVETARM
Sbjct: 118 FTEDQMNRYESFRRSALQKSNMRRLLVSITGSQKISLPMTIVVCGIAKMFVGELVETARM 177

Query: 550 VMAERKDTGPIRPCHMREAYRRLKLEGKIPKGSVP 654
           VM ER ++GPIRPCH+REAYRRLKLEGK+PK SVP
Sbjct: 178 VMTERNESGPIRPCHIREAYRRLKLEGKVPKRSVP 212


>ref|NP_193761.1| TBP-associated factor 11 [Arabidopsis thaliana]
           gi|75264738|sp|Q9M565.1|TAF11_ARATH RecName:
           Full=Transcription initiation factor TFIID subunit 11;
           AltName: Full=TBP-associated factor 11; Short=AtTAF11
           gi|7638155|gb|AAF65405.1|AF238326_1 putative TATA
           binding protein associated factor 24kDa subunit
           [Arabidopsis thaliana]
           gi|13877757|gb|AAK43956.1|AF370141_1 unknown protein
           [Arabidopsis thaliana] gi|15293301|gb|AAK93761.1|
           unknown protein [Arabidopsis thaliana]
           gi|39545902|gb|AAR28014.1| TAF11 [Arabidopsis thaliana]
           gi|332658898|gb|AEE84298.1| TBP-associated factor 11
           [Arabidopsis thaliana]
          Length = 210

 Score =  216 bits (549), Expect = 1e-53
 Identities = 118/211 (55%), Positives = 145/211 (68%), Gaps = 1/211 (0%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEED-EGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLTSR 213
           MKHSK+ FEA IEE+ E SP ESPVG        +    ++      +  P  + R   +
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEDGRIEIDQTQDEDERP-VDVRRPMK 59

Query: 214 NIPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQFTEEQMSR 393
               S   T   +K K         NMDV+L K+ +SSDP K++KMQ+ILSQFTE+QMSR
Sbjct: 60  KAKTSVVVTEAKNKDKDEDDEEEEENMDVELTKYPTSSDPAKMAKMQTILSQFTEDQMSR 119

Query: 394 YESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMAERKDT 573
           YESFRRS  Q+  MKKLL  +TG+ KI +PM IV  GIAK+FVGELVETAR+VMAERK++
Sbjct: 120 YESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVACGIAKMFVGELVETARVVMAERKES 179

Query: 574 GPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           GPIRPCH+RE+YRRLKLEGK+PK SVPRLFR
Sbjct: 180 GPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 210


>ref|XP_003569565.1| PREDICTED: transcription initiation factor TFIID subunit 11-like
           [Brachypodium distachyon]
          Length = 216

 Score =  215 bits (548), Expect = 2e-53
 Identities = 124/216 (57%), Positives = 155/216 (71%), Gaps = 10/216 (4%)
 Frame = +1

Query: 49  KNSFEAGIEEDEGSPRESPVGLDENET-EDQAALNDVHGGDAANNNPG---PENRLTSRN 216
           K+ FEA +EE E SP +SP   +E+   E   A+++ + G AA+  P    P  + +S  
Sbjct: 2   KDPFEAAVEEQE-SPPDSPAQPEEDAAAEAPHAISEDYDGGAASGGPRAPPPRPQPSSHA 60

Query: 217 IP-ISAGTTGPSSKIKXXXXXXXXXN----MDVQLGKFAS-SSDPDKLSKMQSILSQFTE 378
            P  S     P +K++         +    M+V L K  S +SDPDKL+KM ++LSQFTE
Sbjct: 61  GPSTSVAPALPRTKVRHQKEQDDDDDEEDHMEVDLDKLPSGTSDPDKLAKMNALLSQFTE 120

Query: 379 EQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMA 558
           +QM+RYESFRRSGFQKSNMKKLL SITG+ KIS+P TIVVSGIAK+FVGE++ETAR+VM 
Sbjct: 121 DQMNRYESFRRSGFQKSNMKKLLASITGSQKISMPTTIVVSGIAKMFVGEVIETARIVMT 180

Query: 559 ERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           ERKD+GPIRPCH+REAYRRLKLEGKIPK SVPRLFR
Sbjct: 181 ERKDSGPIRPCHIREAYRRLKLEGKIPKRSVPRLFR 216


>ref|XP_006285330.1| hypothetical protein CARUB_v10006719mg [Capsella rubella]
           gi|482554035|gb|EOA18228.1| hypothetical protein
           CARUB_v10006719mg [Capsella rubella]
          Length = 208

 Score =  214 bits (544), Expect = 4e-53
 Identities = 124/219 (56%), Positives = 149/219 (68%), Gaps = 9/219 (4%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEED-EGSPRESPVG-------LDENETE-DQAALNDVHGGDAANNNPG 189
           MKHSK+ FEA IEE+ E SP ESPVG        +E   E DQ A  D    D       
Sbjct: 1   MKHSKDPFEAAIEEEQEESPPESPVGGGGGGDGSEEGRAEIDQTAEEDERPVDV------ 54

Query: 190 PENRLTSRNIPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQ 369
              R  ++    S   T   SK K         NM+V+L K+ +S+DP K++KMQ+ILSQ
Sbjct: 55  ---RRPAKKSKTSVVVT--ESKNKDEDEEEEEENMEVELTKYPTSADPAKMAKMQTILSQ 109

Query: 370 FTEEQMSRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARM 549
           FTE+QMSRYESFRRS  Q+  MKKLL  +TG+ KI +PM IVV GIAK+FVGELVETAR+
Sbjct: 110 FTEDQMSRYESFRRSALQRPQMKKLLIGVTGSQKIGMPMIIVVCGIAKMFVGELVETARV 169

Query: 550 VMAERKDTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           VMAERK++GPIRPCH+RE+YRRLKLEGK+PK SVPRLFR
Sbjct: 170 VMAERKESGPIRPCHIRESYRRLKLEGKVPKRSVPRLFR 208


>gb|AFK44701.1| unknown [Medicago truncatula]
          Length = 203

 Score =  213 bits (543), Expect = 6e-53
 Identities = 120/213 (56%), Positives = 150/213 (70%), Gaps = 3/213 (1%)
 Frame = +1

Query: 37  MKHSKNSFEAGIEEDEGSPRESPVGLDENETEDQAALNDVHGGDAANNNPGPENRLT--- 207
           MK SK+ FEA  EE   SP ESP+   E E +  A+  + +    + N+  P++ LT   
Sbjct: 1   MKQSKDPFEAAFEE---SPPESPI---ETEPDPDASTENPN----STNSSLPQSTLTHEE 50

Query: 208 SRNIPISAGTTGPSSKIKXXXXXXXXXNMDVQLGKFASSSDPDKLSKMQSILSQFTEEQM 387
             N   +  +    +K K         NMDV+L KF ++ DP K++KMQ+ILSQFTEEQM
Sbjct: 51  EHNHIKTPNSNNTITKHKDEEDDEEEDNMDVELAKFPTAGDPHKMAKMQAILSQFTEEQM 110

Query: 388 SRYESFRRSGFQKSNMKKLLTSITGNSKISIPMTIVVSGIAKLFVGELVETARMVMAERK 567
           SRYESFRR+GFQK+NMK+LLTSITG  KISIP+TI VSGIAK+FVGE+VETAR +M ERK
Sbjct: 111 SRYESFRRAGFQKANMKRLLTSITGTQKISIPITIAVSGIAKVFVGEVVETARTIMKERK 170

Query: 568 DTGPIRPCHMREAYRRLKLEGKIPKGSVPRLFR 666
           +TGPIRPCH+REA+RRLKLEGKI K +  RLFR
Sbjct: 171 ETGPIRPCHLREAHRRLKLEGKIFKRTTSRLFR 203