BLASTX nr result
ID: Atropa21_contig00024772
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024772
(595 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chl... 362 4e-98
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl... 362 4e-98
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor... 362 4e-98
gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma ... 340 2e-91
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor... 333 3e-89
gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus... 330 2e-88
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr... 328 7e-88
ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citr... 328 7e-88
gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus pe... 327 1e-87
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor... 327 1e-87
ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chl... 325 6e-87
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl... 325 6e-87
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 324 9e-87
ref|XP_006597578.1| PREDICTED: RNA pseudouridine synthase 6, chl... 324 1e-86
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl... 324 1e-86
ref|XP_002304926.2| pseudouridine synthase family protein [Popul... 323 3e-86
gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis] 322 5e-86
ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [... 320 1e-85
ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chlor... 320 2e-85
ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 319 3e-85
>ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X3 [Solanum tuberosum]
Length = 440
Score = 362 bits (929), Expect = 4e-98
Identities = 175/197 (88%), Positives = 181/197 (91%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCPKPPPTA+PEQIKVYEEVTDPS+LR+RTSIKGKTVREAQKTF+ITR DEIVE GTYLR
Sbjct: 103 VCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTYLR 162
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATF TRALGFS
Sbjct: 163 VHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFS 222
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
APL TTHQIDNCTEGCVVLARSKEYCSVFHGKIRE APVPIGILTHYMR
Sbjct: 223 APLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPIGILTHYMR 282
Query: 53 PINMAPRLVSEDFVKGW 3
PINMAPRLVSEDFVKGW
Sbjct: 283 PINMAPRLVSEDFVKGW 299
>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 483
Score = 362 bits (929), Expect = 4e-98
Identities = 175/197 (88%), Positives = 181/197 (91%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCPKPPPTA+PEQIKVYEEVTDPS+LR+RTSIKGKTVREAQKTF+ITR DEIVE GTYLR
Sbjct: 146 VCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFKITRADEIVEAGTYLR 205
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATF TRALGFS
Sbjct: 206 VHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFS 265
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
APL TTHQIDNCTEGCVVLARSKEYCSVFHGKIRE APVPIGILTHYMR
Sbjct: 266 APLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAAAPVPIGILTHYMR 325
Query: 53 PINMAPRLVSEDFVKGW 3
PINMAPRLVSEDFVKGW
Sbjct: 326 PINMAPRLVSEDFVKGW 342
>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
lycopersicum]
Length = 448
Score = 362 bits (929), Expect = 4e-98
Identities = 176/197 (89%), Positives = 180/197 (91%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCPKPPPTA+PEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTF+ITR DEIVE GTYLR
Sbjct: 111 VCPKPPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFKITRADEIVEAGTYLR 170
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATF TRALGFS
Sbjct: 171 VHVHPKRFPRCYDIDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFATRALGFS 230
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
APL TTHQIDNCTEGCVVLARSKEYCSVFHGKIRE APVPIGILTHYMR
Sbjct: 231 APLLTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVRKLYLALAAAPVPIGILTHYMR 290
Query: 53 PINMAPRLVSEDFVKGW 3
PINMAPRLVS DFVKGW
Sbjct: 291 PINMAPRLVSRDFVKGW 307
>gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 491
Score = 340 bits (872), Expect = 2e-91
Identities = 160/197 (81%), Positives = 175/197 (88%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PPP+ATPEQI++++EVT PSVL KRTSI+GKTVREAQKTFRIT D+ VE GTYLR
Sbjct: 151 VCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFRITHVDQFVEAGTYLR 210
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCYE+DWKSRIIAVTD YVVLDKPAGTSVGGTTDNIEESCATF RALGFS
Sbjct: 211 VHVHPKRFPRCYEIDWKSRIIAVTDSYVVLDKPAGTSVGGTTDNIEESCATFANRALGFS 270
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL+TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE AP+PIG++THYMR
Sbjct: 271 TPLKTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALTAAPLPIGVITHYMR 330
Query: 53 PINMAPRLVSEDFVKGW 3
PINMAPRLVSEDF+KGW
Sbjct: 331 PINMAPRLVSEDFIKGW 347
>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
product [Vitis vinifera]
Length = 472
Score = 333 bits (853), Expect = 3e-89
Identities = 155/197 (78%), Positives = 175/197 (88%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PPP+ATPEQ+++++EVT PSVLRKR SIKGKT+REAQKTFRIT +E VE GTYLR
Sbjct: 135 VCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFRITDVNEFVEAGTYLR 194
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCYE+DWKSRIIAVT+ YVVLDKPAGTSVGGTTDNIEESCATF TRALG +
Sbjct: 195 VHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLT 254
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL+TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE AP+PIGI+THYMR
Sbjct: 255 TPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYRALAAAPMPIGIVTHYMR 314
Query: 53 PINMAPRLVSEDFVKGW 3
P+N+APRL+SEDF+KGW
Sbjct: 315 PVNIAPRLISEDFIKGW 331
>gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
Length = 478
Score = 330 bits (846), Expect = 2e-88
Identities = 153/197 (77%), Positives = 173/197 (87%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PPP+AT EQI+V++EVT+PSVLR+R SIKGKTVREAQKTFR+T D+ VE GTYLR
Sbjct: 140 VCPQPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFRVTHADQFVEPGTYLR 199
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCYE+DW+SRII+V + YVVLDKPAGTSVGGTTDNIEESCATF TRALG +
Sbjct: 200 VHVHPKRFPRCYEIDWRSRIISVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLT 259
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
APL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE +P+P GI+THYMR
Sbjct: 260 APLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALASSPLPTGIITHYMR 319
Query: 53 PINMAPRLVSEDFVKGW 3
PINMAPRL+SEDF+KGW
Sbjct: 320 PINMAPRLISEDFIKGW 336
>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551677|gb|ESR62306.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 487
Score = 328 bits (841), Expect = 7e-88
Identities = 153/197 (77%), Positives = 175/197 (88%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCPKPP TATPEQ++V++EVTDPSVL KR+SIKGKTVREAQKTFRIT D+IVE GTYLR
Sbjct: 141 VCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLR 200
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DWKSRIIAVT+ +VVLDKPAGTSVGGTTDNIEESCATF +RALG +
Sbjct: 201 VHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALGLT 260
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL+TTHQIDNCTEGCVVLAR++EYCS+FH KIRE AP+P+GI+THYMR
Sbjct: 261 TPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAPLPVGIMTHYMR 320
Query: 53 PINMAPRLVSEDFVKGW 3
PIN+APRL+SEDF+KGW
Sbjct: 321 PINIAPRLISEDFIKGW 337
>ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551674|gb|ESR62303.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 392
Score = 328 bits (841), Expect = 7e-88
Identities = 153/197 (77%), Positives = 175/197 (88%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCPKPP TATPEQ++V++EVTDPSVL KR+SIKGKTVREAQKTFRIT D+IVE GTYLR
Sbjct: 46 VCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLR 105
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DWKSRIIAVT+ +VVLDKPAGTSVGGTTDNIEESCATF +RALG +
Sbjct: 106 VHVHPKRFPRCYDIDWKSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALGLT 165
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL+TTHQIDNCTEGCVVLAR++EYCS+FH KIRE AP+P+GI+THYMR
Sbjct: 166 TPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTAAPLPVGIMTHYMR 225
Query: 53 PINMAPRLVSEDFVKGW 3
PIN+APRL+SEDF+KGW
Sbjct: 226 PINIAPRLISEDFIKGW 242
>gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
Length = 477
Score = 327 bits (839), Expect = 1e-87
Identities = 153/197 (77%), Positives = 172/197 (87%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCPKPPPTATPEQ++V++EVT PSVL+ R SIKGKTVREAQKTFRIT DE VE GTYLR
Sbjct: 138 VCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFRITHADEFVEAGTYLR 197
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DWKSRIIAV++++VVLDKPAGT+VGGTTDNIEESCATF TRALG +
Sbjct: 198 VHVHPKRFPRCYDIDWKSRIIAVSEEFVVLDKPAGTTVGGTTDNIEESCATFATRALGLT 257
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE APVP GI+THYMR
Sbjct: 258 TPLNTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKLYLALAAAPVPTGIITHYMR 317
Query: 53 PINMAPRLVSEDFVKGW 3
PIN+APRL+SEDF++ W
Sbjct: 318 PINVAPRLISEDFIERW 334
>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 477
Score = 327 bits (838), Expect = 1e-87
Identities = 153/197 (77%), Positives = 173/197 (87%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCPKPPPTATPEQ++VY+EVT PSVL+KR SIKGKTVREAQKTFRIT D+ VE GTYLR
Sbjct: 138 VCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFRITHADQYVEDGTYLR 197
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DWKSR+IAVT+D+VVLDKPAGT+VGGTTDNIEESCATFT+RALG S
Sbjct: 198 VHVHPKRFPRCYDIDWKSRVIAVTEDFVVLDKPAGTTVGGTTDNIEESCATFTSRALGLS 257
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL TTHQIDNCTEGCVVLAR+K+YCSVFHGKIRE APVP+G +THYMR
Sbjct: 258 TPLMTTHQIDNCTEGCVVLARTKDYCSVFHGKIREKKVKKLYLALAAAPVPLGTITHYMR 317
Query: 53 PINMAPRLVSEDFVKGW 3
PIN+APRL+SED ++ W
Sbjct: 318 PINVAPRLISEDSIERW 334
>ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X2 [Glycine max]
Length = 390
Score = 325 bits (833), Expect = 6e-87
Identities = 151/197 (76%), Positives = 170/197 (86%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PPP AT EQI+V++EVT+PSVLRKR SIKGKTVREAQKTFR+T D+ VE GTYLR
Sbjct: 140 VCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLR 199
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPR YE+DW+SRIIAV + YVVLDKPAGTSVGGTTDNIEESCATF TRALG +
Sbjct: 200 VHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMT 259
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL TTHQIDNCTEGCVVLAR+K+YCS+FHGKIRE +P+P GI+THYMR
Sbjct: 260 TPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASPLPTGIITHYMR 319
Query: 53 PINMAPRLVSEDFVKGW 3
PINMAPRL+SEDF+KGW
Sbjct: 320 PINMAPRLISEDFIKGW 336
>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Glycine max]
Length = 478
Score = 325 bits (833), Expect = 6e-87
Identities = 151/197 (76%), Positives = 170/197 (86%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PPP AT EQI+V++EVT+PSVLRKR SIKGKTVREAQKTFR+T D+ VE GTYLR
Sbjct: 140 VCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLR 199
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPR YE+DW+SRIIAV + YVVLDKPAGTSVGGTTDNIEESCATF TRALG +
Sbjct: 200 VHVHPKRFPRSYEIDWRSRIIAVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMT 259
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL TTHQIDNCTEGCVVLAR+K+YCS+FHGKIRE +P+P GI+THYMR
Sbjct: 260 TPLMTTHQIDNCTEGCVVLARTKDYCSIFHGKIREKKVKKLYLALAASPLPTGIITHYMR 319
Query: 53 PINMAPRLVSEDFVKGW 3
PINMAPRL+SEDF+KGW
Sbjct: 320 PINMAPRLISEDFIKGW 336
>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 487
Score = 324 bits (831), Expect = 9e-87
Identities = 152/197 (77%), Positives = 173/197 (87%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCPKPP TATPEQ++V++EVTDPSVL KR+SIKGKTVREAQKTFRIT D+IVE GTYLR
Sbjct: 141 VCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFRITHVDQIVEAGTYLR 200
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DW SRIIAVT+ +VVLDKPAGTSVGGTTDNIEESCATF +RALG +
Sbjct: 201 VHVHPKRFPRCYDIDWNSRIIAVTESHVVLDKPAGTSVGGTTDNIEESCATFASRALGLT 260
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL+TTHQIDNCTEGCVVLAR++EYCS+FH KIRE AP+P+GI+THYMR
Sbjct: 261 TPLRTTHQIDNCTEGCVVLARTQEYCSIFHRKIREKKVKKLYLALTTAPLPVGIMTHYMR 320
Query: 53 PINMAPRLVSEDFVKGW 3
PIN+APRLVSEDF+ GW
Sbjct: 321 PINIAPRLVSEDFITGW 337
>ref|XP_006597578.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X2 [Glycine max]
Length = 390
Score = 324 bits (830), Expect = 1e-86
Identities = 151/197 (76%), Positives = 168/197 (85%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PPP AT EQI+V++EVT+PSVLRKR SIKGKTVREAQKTFR+T D+ VE GTYLR
Sbjct: 140 VCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLR 199
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKR PRCYE+DW+SRII V + YVVLDKPAGTSVGGTTDNIEESCATF TRALG +
Sbjct: 200 VHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMT 259
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE P+P GI+THYMR
Sbjct: 260 TPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFPLPTGIITHYMR 319
Query: 53 PINMAPRLVSEDFVKGW 3
PI+MAPRL+SEDF+KGW
Sbjct: 320 PIDMAPRLISEDFIKGW 336
>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Glycine max]
Length = 478
Score = 324 bits (830), Expect = 1e-86
Identities = 151/197 (76%), Positives = 168/197 (85%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PPP AT EQI+V++EVT+PSVLRKR SIKGKTVREAQKTFR+T D+ VE GTYLR
Sbjct: 140 VCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFRVTHVDQFVEPGTYLR 199
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKR PRCYE+DW+SRII V + YVVLDKPAGTSVGGTTDNIEESCATF TRALG +
Sbjct: 200 VHVHPKRSPRCYEIDWRSRIITVAESYVVLDKPAGTSVGGTTDNIEESCATFATRALGMT 259
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE P+P GI+THYMR
Sbjct: 260 TPLMTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKKVKKFYLALAAFPLPTGIITHYMR 319
Query: 53 PINMAPRLVSEDFVKGW 3
PI+MAPRL+SEDF+KGW
Sbjct: 320 PIDMAPRLISEDFIKGW 336
>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
gi|550340110|gb|EEE85437.2| pseudouridine synthase
family protein [Populus trichocarpa]
Length = 470
Score = 323 bits (827), Expect = 3e-86
Identities = 152/197 (77%), Positives = 171/197 (86%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PP TATPEQI+V+EEVT PSVL+KR SIKGKTVREAQKTFRIT D+ +E G YLR
Sbjct: 129 VCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFRITHVDQFLEAGMYLR 188
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DWKSRII VT+ +VVLDKPAGTSVGGTTDNIEESCATF TRALG +
Sbjct: 189 VHVHPKRFPRCYDIDWKSRIIHVTESFVVLDKPAGTSVGGTTDNIEESCATFATRALGLT 248
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
APL+TTHQIDNCTEGCVVLAR++E CSVFHGKIRE +PVPIG++ HYMR
Sbjct: 249 APLRTTHQIDNCTEGCVVLARTREDCSVFHGKIREKTVKKLYIALAASPVPIGVVNHYMR 308
Query: 53 PINMAPRLVSEDFVKGW 3
PINMAPRLVSE+F+KGW
Sbjct: 309 PINMAPRLVSEEFIKGW 325
>gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis]
Length = 446
Score = 322 bits (825), Expect = 5e-86
Identities = 153/192 (79%), Positives = 168/192 (87%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCPKPPPTATPEQIKV++EVT PSVLRKR SIKGKTVREAQKTFRIT ++ VE GTYLR
Sbjct: 138 VCPKPPPTATPEQIKVFKEVTAPSVLRKRASIKGKTVREAQKTFRITDREQFVEAGTYLR 197
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCYE+DWKSRIIAV + Y+VLDKPAGTSVGGTTDNIEE+CATF +RALG +
Sbjct: 198 VHVHPKRFPRCYEIDWKSRIIAVAESYIVLDKPAGTSVGGTTDNIEETCATFASRALGLT 257
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL+TTHQIDNCTEGCVVLAR+KEYCSVFHGKIRE AP+P GI+THYMR
Sbjct: 258 TPLRTTHQIDNCTEGCVVLARTKEYCSVFHGKIREKTVKKLYLALAAAPLPTGIITHYMR 317
Query: 53 PINMAPRLVSED 18
PINMAPRL+SED
Sbjct: 318 PINMAPRLISED 329
>ref|XP_002518515.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
gi|223542360|gb|EEF43902.1| ribosomal pseudouridine
synthase, putative [Ricinus communis]
Length = 476
Score = 320 bits (821), Expect = 1e-85
Identities = 149/197 (75%), Positives = 171/197 (86%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PP TATPEQI+++E+ T PSVL+KR+SIKGKTVREAQKTFRIT D+ +E GTYLR
Sbjct: 135 VCPRPPTTATPEQIRLFEKFTAPSVLKKRSSIKGKTVREAQKTFRITHVDQYLEAGTYLR 194
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCY++DWKSRIIAVTD YVVLDKPAGTSVGGT DNIEESCATF TRALG +
Sbjct: 195 VHVHPKRFPRCYDIDWKSRIIAVTDCYVVLDKPAGTSVGGTADNIEESCATFATRALGLT 254
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
PL+TTHQIDNCTEGCVVLARSKEYCSVFHGKIRE +PVP+G++ +YMR
Sbjct: 255 TPLKTTHQIDNCTEGCVVLARSKEYCSVFHGKIREKKVKKLYLALAASPVPVGVIKNYMR 314
Query: 53 PINMAPRLVSEDFVKGW 3
P+N+APRL+SE+FV GW
Sbjct: 315 PVNIAPRLLSEEFVNGW 331
>ref|XP_004151517.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Cucumis
sativus]
Length = 475
Score = 320 bits (819), Expect = 2e-85
Identities = 150/197 (76%), Positives = 170/197 (86%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PP TATPEQI+++++ T+PS L+ R SIKGKTVREAQKTFRIT DE VEVGTYLR
Sbjct: 134 VCPQPPKTATPEQIRLFKKFTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLR 193
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCYE+DWKSRIIAVT+ YVVLDKPAGTSVGGTTDNIEESCATF TRALG +
Sbjct: 194 VHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLT 253
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
+PL TTHQIDNCTEGCV+ AR+KEYCS+FHGKIRE APVP+GI+THYMR
Sbjct: 254 SPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMR 313
Query: 53 PINMAPRLVSEDFVKGW 3
PIN+APRLVS+D + GW
Sbjct: 314 PINIAPRLVSKDCIDGW 330
>ref|XP_004158048.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 6,
chloroplastic-like [Cucumis sativus]
Length = 475
Score = 319 bits (818), Expect = 3e-85
Identities = 150/197 (76%), Positives = 169/197 (85%)
Frame = -3
Query: 593 VCPKPPPTATPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFRITRPDEIVEVGTYLR 414
VCP+PP TATPEQI++++ T+PS L+ R SIKGKTVREAQKTFRIT DE VEVGTYLR
Sbjct: 134 VCPQPPKTATPEQIRLFKNXTEPSFLKGRKSIKGKTVREAQKTFRITHVDEFVEVGTYLR 193
Query: 413 VHVHPKRFPRCYELDWKSRIIAVTDDYVVLDKPAGTSVGGTTDNIEESCATFTTRALGFS 234
VHVHPKRFPRCYE+DWKSRIIAVT+ YVVLDKPAGTSVGGTTDNIEESCATF TRALG +
Sbjct: 194 VHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSVGGTTDNIEESCATFATRALGLT 253
Query: 233 APLQTTHQIDNCTEGCVVLARSKEYCSVFHGKIREXXXXXXXXXXXXAPVPIGILTHYMR 54
+PL TTHQIDNCTEGCV+ AR+KEYCS+FHGKIRE APVP+GI+THYMR
Sbjct: 254 SPLWTTHQIDNCTEGCVIFARTKEYCSIFHGKIREKKVMKLYLALSAAPVPMGIITHYMR 313
Query: 53 PINMAPRLVSEDFVKGW 3
PIN+APRLVS+D + GW
Sbjct: 314 PINIAPRLVSKDCIDGW 330