BLASTX nr result
ID: Atropa21_contig00024743
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024743
(545 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004251753.1| PREDICTED: reticulon-like protein B21-like [... 221 9e-56
ref|XP_006350096.1| PREDICTED: reticulon-like protein B21-like [... 207 1e-51
gb|EXC26162.1| Reticulon-like protein [Morus notabilis] 65 8e-09
ref|XP_006343731.1| PREDICTED: reticulon-like protein B21-like [... 64 3e-08
ref|XP_004242584.1| PREDICTED: uncharacterized protein LOC101265... 60 3e-07
ref|XP_002533975.1| hypothetical protein RCOM_0370390 [Ricinus c... 56 6e-06
>ref|XP_004251753.1| PREDICTED: reticulon-like protein B21-like [Solanum lycopersicum]
Length = 653
Score = 221 bits (563), Expect = 9e-56
Identities = 120/166 (72%), Positives = 130/166 (78%), Gaps = 1/166 (0%)
Frame = +1
Query: 1 SKKMDEKCEDLSKNLDEKCKDLSVSADGVVGITRKTWKAENFEGNPIQIASKRSDLSKNL 180
SKK+DEKC+DL KNLDEKCK LSVS DGVVGIT+KTWK+E+FEGNP QIASKRSDL KNL
Sbjct: 158 SKKLDEKCKDLRKNLDEKCKSLSVSVDGVVGITKKTWKSESFEGNPFQIASKRSDLRKNL 217
Query: 181 DEKCKDLSVSADGVNRKIPIQSKKNSELRKLK-PEFVNGNVKKSNLDVRIXXXXXXXXXX 357
DEK KDLSVSAD V +K PIQ KK+SELRKLK + VNGNVKKSNL+
Sbjct: 218 DEKSKDLSVSADEVCKKAPIQKKKSSELRKLKSDQSVNGNVKKSNLE------------- 264
Query: 358 XXXXXXXIGIKKTKSEEFGMCEEKFITSNVVSEAKSANKLEKNLEN 495
I IKKTKSEEFGMCEEKFITSNVVSEA+S KLEKNLEN
Sbjct: 265 -----DSIEIKKTKSEEFGMCEEKFITSNVVSEAESVKKLEKNLEN 305
Score = 70.1 bits (170), Expect = 3e-10
Identities = 52/106 (49%), Positives = 66/106 (62%), Gaps = 6/106 (5%)
Frame = +1
Query: 28 DLSKNLDEKCKDLSVSADGVVGITRKTWKA-ENFEGNPIQIASKRSDLSKNLDEKCKDLS 204
D ++ K ++L V GVV RKTWK E+FEGNPIQIASK++DLSK+LD K +DLS
Sbjct: 68 DKKLDMGPKRENLDV---GVVSGKRKTWKTTESFEGNPIQIASKKTDLSKSLDGKSRDLS 124
Query: 205 VSADGVNRKIPIQSKKNSELRKLKPEFVNGNV-----KKSNLDVRI 327
VS DGV + I +KKN LK E GN KKS+L ++
Sbjct: 125 VSVDGV---VGI-TKKN-----LKNESFEGNPLQIANKKSDLSKKL 161
>ref|XP_006350096.1| PREDICTED: reticulon-like protein B21-like [Solanum tuberosum]
Length = 644
Score = 207 bits (527), Expect = 1e-51
Identities = 112/160 (70%), Positives = 126/160 (78%), Gaps = 1/160 (0%)
Frame = +1
Query: 19 KCEDLSKNLDEKCKDLSVSADGVVGITRKTWKAENFEGNPIQIASKRSDLSKNLDEKCKD 198
K DLSKNLDEKC++LSVS DGVVGIT++TWK+E+FEGNP QIASKRSDL K LDEK KD
Sbjct: 149 KKTDLSKNLDEKCRNLSVSVDGVVGITKRTWKSESFEGNPFQIASKRSDLRKKLDEKRKD 208
Query: 199 LSVSADGVNRKIPIQSKKNSELRKLKPE-FVNGNVKKSNLDVRIXXXXXXXXXXXXXXXX 375
LSVSADGV +K+PIQSKK+SELRKLK + VNGNVKKSNL+
Sbjct: 209 LSVSADGVCKKVPIQSKKSSELRKLKSDKSVNGNVKKSNLE-----------ESSKNLEG 257
Query: 376 XIGIKKTKSEEFGMCEEKFITSNVVSEAKSANKLEKNLEN 495
IGIKKTKSEEFG+CEEKFITSN VSE +S NKLEK+LEN
Sbjct: 258 SIGIKKTKSEEFGICEEKFITSNAVSEVESVNKLEKSLEN 297
Score = 70.1 bits (170), Expect = 3e-10
Identities = 42/73 (57%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = +1
Query: 7 KMDEKCEDLSKNLDEKCKDLSVSADGVVGITRKTWKA-ENFEGNPIQIASKRSDLSKNLD 183
++DEK + + K ++L V G+V RKTWK E+FEGNPIQIASK++DLSK LD
Sbjct: 62 QVDEKLD-----MGPKRENLDV---GLVSGKRKTWKTTESFEGNPIQIASKKTDLSKILD 113
Query: 184 EKCKDLSVSADGV 222
EK +DLSVSADGV
Sbjct: 114 EKSRDLSVSADGV 126
>gb|EXC26162.1| Reticulon-like protein [Morus notabilis]
Length = 702
Score = 65.5 bits (158), Expect = 8e-09
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 19/151 (12%)
Frame = +1
Query: 100 RKTWKAENFEG---NPIQIASKRSDLSKNLDEKCKDLSVSADGVNRKIPIQSKK------ 252
RKTWK+E EG NPIQIA +S+ KN DE+ K++S+S +G N+K P+Q ++
Sbjct: 62 RKTWKSETLEGFEKNPIQIARGKSEEKKNSDEQVKEMSISVEG-NKKSPVQPRRRRSEGN 120
Query: 253 ---------NSELRKLKPEFVNGNVKKSNLDVRIXXXXXXXXXXXXXXXXXIGIKKTKS- 402
+EL K K + V +V++ N DV IG + ++
Sbjct: 121 KEIGIRRSPRTELAKPKSDVVKVSVEE-NKDV----VEEIEKSPVEKKSEEIGSESDEAC 175
Query: 403 EEFGMCEEKFITSNVVSEAKSANKLEKNLEN 495
+EFG+CEEK I+S+ V ++KS K + E+
Sbjct: 176 KEFGVCEEKVISSS-VEDSKSEPKDDDERES 205
>ref|XP_006343731.1| PREDICTED: reticulon-like protein B21-like [Solanum tuberosum]
Length = 746
Score = 63.5 bits (153), Expect = 3e-08
Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 14/109 (12%)
Frame = +1
Query: 25 EDLSKNLDEKCKDLSVSADGVVGI-------TRKTWKAE-NFEGNPIQIASKRSDLSKNL 180
+++ N E+ K L + + +G+ RKTWK+E NFEGNPI+I++KRS L
Sbjct: 51 DEMKTNEVEEHKKLEMGSKTNLGVGCFVMSGKRKTWKSESNFEGNPIEISTKRSQL---- 106
Query: 181 DEKCKDLSVSADGVNRKIPIQSKKNS------ELRKLKPEFVNGNVKKS 309
CK+LSVSA +K PIQSKK EL+K+K NGN++ S
Sbjct: 107 ---CKELSVSA---MKKSPIQSKKREGNEKMCELKKVKNVSPNGNLRNS 149
>ref|XP_004242584.1| PREDICTED: uncharacterized protein LOC101265346 [Solanum
lycopersicum]
Length = 738
Score = 60.1 bits (144), Expect = 3e-07
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 14/109 (12%)
Frame = +1
Query: 25 EDLSKNLDEKCKDLSVSADGVVGI-------TRKTWKAE-NFEGNPIQIASKRSDLSKNL 180
+++ N E+ K L + + +G+ RKTWK+E N EGNPI+I++KRS L
Sbjct: 51 DEMKTNEVEEDKKLEMGSKTNLGVGCFVMSGKRKTWKSESNSEGNPIEISTKRSQL---- 106
Query: 181 DEKCKDLSVSADGVNRKIPIQSKKN------SELRKLKPEFVNGNVKKS 309
CK+LSVSA ++ PIQSKK SE++K+K NGN++ S
Sbjct: 107 ---CKELSVSA---MKRSPIQSKKREGNEKMSEMKKVKNVSPNGNLRNS 149
>ref|XP_002533975.1| hypothetical protein RCOM_0370390 [Ricinus communis]
gi|223526038|gb|EEF28406.1| hypothetical protein
RCOM_0370390 [Ricinus communis]
Length = 604
Score = 55.8 bits (133), Expect = 6e-06
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 31/185 (16%)
Frame = +1
Query: 25 EDLSKNLDEKCKDLSVSADGVVGITRKTWKAENFEGNPIQIASKRSDLS---KNLDEKCK 195
ED S + L + G RKTWK+E+F+ PIQIA +++ S KN +E+C+
Sbjct: 44 EDTSTGDSPSSRKLVKRSPSGTGAKRKTWKSESFDA-PIQIAKGKTNSSSSIKNCEEQCR 102
Query: 196 DLSVSAD-GVNRKIPIQSKK-------NSEL--------------RKLKPEFVNGN---- 297
+LSVS D G+N+ + + S+K N EL +KL+ E +GN
Sbjct: 103 ELSVSLDGGINKSLMLSSRKGGRSYGSNKELSMSVDGTDKSSILGKKLRSEGGDGNERNP 162
Query: 298 --VKKSNLDVRIXXXXXXXXXXXXXXXXXIGIKKTKSEEFGMCEEKFITSNVVSEAKSAN 471
++K+ D++ ++K KS+ +K +SN ++ A S
Sbjct: 163 VQIRKARSDIK------------EVVESGAQLRKVKSDSVNGGNDKSASSNGINAADSG- 209
Query: 472 KLEKN 486
+EKN
Sbjct: 210 -IEKN 213