BLASTX nr result
ID: Atropa21_contig00024735
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00024735
(888 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598... 157 6e-64
dbj|BAD99221.1| polypepetide with reverse transcriptase and RNas... 144 6e-64
ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266... 138 5e-57
ref|XP_006358404.1| PREDICTED: LRR receptor-like serine/threonin... 137 3e-52
ref|XP_006357458.1| PREDICTED: uncharacterized protein LOC102585... 135 5e-52
ref|XP_006359791.1| PREDICTED: uncharacterized protein LOC102577... 148 6e-49
gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 124 1e-45
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 119 1e-44
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 119 2e-44
ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668... 113 2e-44
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 118 3e-44
ref|XP_006359191.1| PREDICTED: uncharacterized protein LOC102580... 142 2e-43
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 120 8e-43
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 124 8e-43
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera] 121 2e-42
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 117 2e-42
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 117 2e-42
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 117 2e-42
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera] 118 4e-42
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 112 5e-42
>ref|XP_006365584.1| PREDICTED: uncharacterized protein LOC102598606 [Solanum tuberosum]
Length = 1453
Score = 157 bits (396), Expect(3) = 6e-64
Identities = 76/115 (66%), Positives = 92/115 (80%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L LTHTR D + VQHLSQYMQDPR+PHL AA +LRYL KDP LG+F++AS F +
Sbjct: 1239 LNFLTHTRLDITYGVQHLSQYMQDPREPHLKAAFHMLRYLQKDPTLGIFMSASPDFGIQA 1298
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRVAG 274
F DSDW +CP+SR+SVSG+ + LG SPISWKSKKQ +ISLSSA+AEYRS+R+V G
Sbjct: 1299 FCDSDWASCPDSRRSVSGYIVLLGTSPISWKSKKQDTISLSSAEAEYRSLRKVVG 1353
Score = 77.0 bits (188), Expect(3) = 6e-64
Identities = 41/82 (50%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
Frame = -2
Query: 278 PVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPS--------TS 123
P P + DSQA HIAKKPVFHERTK +E+DCHFVR + +GLIS+ + + T
Sbjct: 1372 PSPVYCDSQAALHIAKKPVFHERTKHIEVDCHFVRSKLQEGLISLYHINTCDQLADILTK 1431
Query: 122 QLTGTVHHRILGTLGVL-SFPT 60
LTG H +L L V+ S PT
Sbjct: 1432 ALTGIKHTAMLNKLAVITSLPT 1453
Score = 59.3 bits (142), Expect(3) = 6e-64
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = -3
Query: 739 HYFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLDP 608
HYFLG+E+L + G++ SQRKF DLLKEF L PV SPLDP
Sbjct: 1171 HYFLGLEILYKNDGILISQRKFVQDLLKEFHVNGLTPVTSPLDP 1214
Score = 157 bits (396), Expect(2) = 3e-47
Identities = 76/115 (66%), Positives = 92/115 (80%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L LTHTR D + VQHLSQYMQDPR+PHL AA +LRYL KDP LG+F++AS F +
Sbjct: 989 LNFLTHTRLDITYGVQHLSQYMQDPREPHLKAAFHMLRYLQKDPTLGIFMSASPDFGIQA 1048
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRVAG 274
F DSDW +CP+SR+SVSG+ + LG SPISWKSKKQ +ISLSSA+AEYRS+R+V G
Sbjct: 1049 FCDSDWASCPDSRRSVSGYIVLLGTSPISWKSKKQDTISLSSAEAEYRSLRKVVG 1103
Score = 59.3 bits (142), Expect(2) = 3e-47
Identities = 27/44 (61%), Positives = 32/44 (72%)
Frame = -3
Query: 739 HYFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLDP 608
HYFLG+E+L + G++ SQRKF DLLKEF L PV SPLDP
Sbjct: 921 HYFLGLEILYKNDGILISQRKFVQDLLKEFHVNGLTPVTSPLDP 964
>dbj|BAD99221.1| polypepetide with reverse transcriptase and RNaseH domains [Petunia
x hybrida]
Length = 389
Score = 144 bits (363), Expect(3) = 6e-64
Identities = 66/116 (56%), Positives = 90/116 (77%)
Frame = -1
Query: 609 LTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLGFGD 430
LTHTR D +F VQ LSQ+MQ PR HL AA LRY+ +PGLG+FL++ SF+L GF D
Sbjct: 174 LTHTRPDISFAVQTLSQHMQSPRSGHLEAAYHTLRYIRNNPGLGIFLSSEQSFQLTGFCD 233
Query: 429 SDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRVAGAFSF 262
+DW +CP+SR+S+SGF++++G P+SWKSKKQ +SLSSA+AEYRS+RR+ ++
Sbjct: 234 ADWASCPDSRRSISGFFLTMGGCPLSWKSKKQQVVSLSSAEAEYRSLRRLVAEIAW 289
Score = 96.3 bits (238), Expect(3) = 6e-64
Identities = 46/77 (59%), Positives = 57/77 (74%), Gaps = 8/77 (10%)
Frame = -2
Query: 281 LPVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQ------ 120
LPV H D+Q+ HIAK PVFHERTK +E+DCHFVR++ LDGLIS+SFVPS+SQ
Sbjct: 303 LPVSVHCDNQSAIHIAKNPVFHERTKHIELDCHFVREKLLDGLISLSFVPSSSQIADIFT 362
Query: 119 --LTGTVHHRILGTLGV 75
LTG +H ++G LGV
Sbjct: 363 KSLTGPLHRSLMGKLGV 379
Score = 52.8 bits (125), Expect(3) = 6e-64
Identities = 24/43 (55%), Positives = 31/43 (72%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLDP 608
YFLG+E+L EP GLI +QRKF +DLL E+ + V +PLDP
Sbjct: 104 YFLGMEILHEPDGLIVTQRKFAMDLLSEYSSLSPRTVTTPLDP 146
>ref|XP_004231415.1| PREDICTED: uncharacterized protein LOC101266877 [Solanum
lycopersicum]
Length = 1537
Score = 138 bits (348), Expect(3) = 5e-57
Identities = 70/119 (58%), Positives = 90/119 (75%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L LT+TR D AF+VQHLSQ+MQDPR PHL AA +LRYL +D LG+ L+ + +
Sbjct: 1323 LNFLTNTRLDIAFSVQHLSQFMQDPRAPHLQAAYHLLRYLKQDTTLGVQLSKNPDCTVQA 1382
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRVAGAFSF 262
F DSDW +C +SRKSVSG+ + LG SPISWKSKKQ ++SLSSA+AEYRS+R+V G ++
Sbjct: 1383 FCDSDWASCSDSRKSVSGYLVLLGNSPISWKSKKQETVSLSSAEAEYRSLRKVVGELTW 1441
Score = 70.5 bits (171), Expect(3) = 5e-57
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 8/80 (10%)
Frame = -2
Query: 278 PVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQ------- 120
P+ + DSQ+ HIA+ PVFHERTK +E+DCHFVR + + LIS+ V +++Q
Sbjct: 1456 PISVYCDSQSAIHIARNPVFHERTKHIEVDCHFVRNKLQEELISLHHVSTSNQLADILTK 1515
Query: 119 -LTGTVHHRILGTLGVLSFP 63
LTG H IL L S P
Sbjct: 1516 ALTGIKHSAILRKLAAKSSP 1535
Score = 60.8 bits (146), Expect(3) = 5e-57
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = -3
Query: 739 HYFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLDP 608
HYFLG+E+L G++ SQRKFT+DLLKE+D + P+ SPLDP
Sbjct: 1255 HYFLGLEILDTTDGVLISQRKFTLDLLKEYDCFNYTPLSSPLDP 1298
>ref|XP_006358404.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
FLS2-like [Solanum tuberosum]
Length = 1471
Score = 137 bits (345), Expect(3) = 3e-52
Identities = 64/115 (55%), Positives = 90/115 (78%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L L +TR D A+ VQHLSQ+MQDPR+PHL AA +LRYL DP LG+F++++ ++ +
Sbjct: 1243 LNFLVNTRLDIAYGVQHLSQFMQDPREPHLQAAYHLLRYLKNDPTLGIFMSSAPNYSVHA 1302
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRVAG 274
+ DSDW +CP+ ++SVSG+ + LG +PISWKSKKQ +ISLSSA+A YRS+++V G
Sbjct: 1303 YCDSDWESCPDFKRSVSGYIVLLGKTPISWKSKKQETISLSSAEAAYRSLKKVVG 1357
Score = 68.2 bits (165), Expect(3) = 3e-52
Identities = 31/64 (48%), Positives = 42/64 (65%)
Frame = -2
Query: 278 PVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQLTGTVHH 99
PV + D+Q+ HIA+ VFHERTK +E+DCHFVR + DGLIS+ V +T QL +
Sbjct: 1376 PVAVYCDNQSAIHIARNLVFHERTKQIEVDCHFVRDKLQDGLISLHHVVTTDQLADLLTK 1435
Query: 98 RILG 87
+ G
Sbjct: 1436 ALTG 1439
Score = 48.1 bits (113), Expect(3) = 3e-52
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -3
Query: 739 HYFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLDP 608
HYFL +E+L G+I SQRKF +DLLKE+ SPLDP
Sbjct: 1175 HYFLCLEILYGEGGVIMSQRKFVLDLLKEYGCLRYSSFSSPLDP 1218
>ref|XP_006357458.1| PREDICTED: uncharacterized protein LOC102585642 [Solanum tuberosum]
Length = 1384
Score = 135 bits (341), Expect(3) = 5e-52
Identities = 65/113 (57%), Positives = 86/113 (76%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L LT+TR D A++VQHLSQ+MQ PR+PHL A VLRYL +DP +G+F++ +
Sbjct: 1224 LNFLTNTRMDIAYSVQHLSQFMQTPREPHLKAGYHVLRYLRQDPTMGIFISNKPDLTVST 1283
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRV 280
+ DSDW CP+SRKSVSG+ + +G SPISWKSKKQ +ISLS A+AEYR++R+V
Sbjct: 1284 YCDSDWAACPDSRKSVSGYLVLMGDSPISWKSKKQATISLSPAEAEYRAVRQV 1336
Score = 63.5 bits (153), Expect(3) = 5e-52
Identities = 28/46 (60%), Positives = 34/46 (73%)
Frame = -2
Query: 260 DSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTS 123
DSQA HIAK PVFHERTK +EIDCHFVR + GLI++ + + S
Sbjct: 1339 DSQAAVHIAKNPVFHERTKHIEIDCHFVRDKLQQGLITLHHISTDS 1384
Score = 53.9 bits (128), Expect(3) = 5e-52
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = -3
Query: 739 HYFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
HYFLG+E+L G++ SQRKFT DLLKEFD+ SPLD
Sbjct: 1156 HYFLGLEILYSLDGVLISQRKFTTDLLKEFDSFDCKVAASPLD 1198
>ref|XP_006359791.1| PREDICTED: uncharacterized protein LOC102577647 [Solanum tuberosum]
Length = 1046
Score = 148 bits (374), Expect(2) = 6e-49
Identities = 69/115 (60%), Positives = 92/115 (80%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L LT+TR D +++VQHLSQ+MQDPR+PHL AA +LRYL DP LG+F++ S+ +
Sbjct: 832 LNFLTNTRMDISYSVQHLSQFMQDPREPHLQAAFHILRYLKADPTLGIFMSQDQSYNVKA 891
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRVAG 274
+ DSDW CP++RKSVSG+ + LG SP+SWKSKKQ +ISLSSA+AEYR++R+VAG
Sbjct: 892 YCDSDWAACPDTRKSVSGYIVLLGNSPLSWKSKKQETISLSSAEAEYRALRKVAG 946
Score = 73.6 bits (179), Expect(2) = 6e-49
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Frame = -2
Query: 281 LPVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQ------ 120
+P+ + DSQ+ HIA+ PVFHERTK +E+DCHFVR GLIS+ + S +Q
Sbjct: 964 MPIEVYCDSQSALHIARNPVFHERTKHIEVDCHFVRNLLQSGLISLHHISSDNQLADILT 1023
Query: 119 --LTGTVHHRILGTLGVLSFPT 60
LTG H L L V S P+
Sbjct: 1024 KTLTGFKHSTALSKLSVFSTPS 1045
Score = 57.4 bits (137), Expect = 7e-06
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = -3
Query: 739 HYFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLDPYAYKARSCIYCATSEP 560
HYFLG+EVL + GLI SQRKF +DLLK++ + SPLDP A K + SEP
Sbjct: 764 HYFLGMEVLYKEDGLIISQRKFVLDLLKDYKVASMSSCNSPLDP-AVKLHAKEGAPLSEP 822
Query: 559 VYAR 548
++ R
Sbjct: 823 LFYR 826
>gb|EOY00074.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 1494
Score = 124 bits (310), Expect(3) = 1e-45
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
LL LT TR D ++ V LSQ+M +PRQPHL A RVLRYL PG GL L +++S L
Sbjct: 1145 LLYLTITRPDISYVVHLLSQFMHNPRQPHLNAVFRVLRYLKNAPGQGLLLPSNNSLSLRA 1204
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSM 289
+ D+DW CP +R+S +G+ I LG SPISW+SKKQT +S SSA+AEYR+M
Sbjct: 1205 YCDADWVGCPTTRRSTTGYIIFLGSSPISWQSKKQTVVSRSSAEAEYRAM 1254
Score = 63.5 bits (153), Expect(3) = 1e-45
Identities = 29/42 (69%), Positives = 31/42 (73%)
Frame = -2
Query: 296 VPCEGLPVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQ 171
VPC PVP D+QA HIA PVFHERTK +EIDCHFVRQ
Sbjct: 1273 VPCSN-PVPLFCDNQAAIHIAANPVFHERTKHIEIDCHFVRQ 1313
Score = 44.3 bits (103), Expect(3) = 1e-45
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIEV R P G++ SQ K+ +D+L E P+ P+D
Sbjct: 1078 YFLGIEVARSPSGIVLSQHKYVLDILSECGLMGSKPLSFPID 1119
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 119 bits (298), Expect(3) = 1e-44
Identities = 61/113 (53%), Positives = 79/113 (69%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ L TR D A++V LSQ+M +PR H AALRV+RYL PG G+ L A S L G
Sbjct: 884 LIYLAVTRPDLAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQG 943
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRV 280
+ DSDW CP +R+S+SG+ + LG SPISWK+KKQ ++S SSA+AEYR+M V
Sbjct: 944 WCDSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAV 996
Score = 70.9 bits (172), Expect(3) = 1e-44
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = -2
Query: 260 DSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQL 117
DSQ+ H+AK PVFHERTK +E+DCHFVR DGLI+ S+VP+ +QL
Sbjct: 1023 DSQSALHMAKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYVPTVTQL 1070
Score = 38.1 bits (87), Expect(3) = 1e-44
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIEV R GL QRK+T+D++ E P P++
Sbjct: 817 YFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIE 858
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 119 bits (297), Expect(3) = 2e-44
Identities = 61/113 (53%), Positives = 79/113 (69%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ L TR D A++V LSQ+M +PR H AALRV+RYL PG G+ L A S L G
Sbjct: 963 LIYLAVTRPDLAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQG 1022
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRV 280
+ DSDW CP +R+S+SG+ + LG SPISWK+KKQ ++S SSA+AEYR+M V
Sbjct: 1023 WCDSDWAACPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAV 1075
Score = 70.9 bits (172), Expect(3) = 2e-44
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = -2
Query: 260 DSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQL 117
DSQ+ H+AK PVFHERTK +E+DCHFVR DGLI+ S+VP+ +QL
Sbjct: 1102 DSQSALHMAKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYVPTVTQL 1149
Score = 38.1 bits (87), Expect(3) = 2e-44
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIEV R GL QRK+T+D++ E P P++
Sbjct: 896 YFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIE 937
>ref|XP_006584292.1| PREDICTED: uncharacterized protein LOC102668041 [Glycine max]
Length = 1176
Score = 113 bits (282), Expect(3) = 2e-44
Identities = 56/113 (49%), Positives = 76/113 (67%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ LT TR D +F V +SQ+MQ+P H A +R+LRY+ + PG GL S +L G
Sbjct: 961 LIYLTITRPDISFAVGVISQFMQNPHLDHWNAVMRILRYVKRAPGQGLLYEDKGSTQLSG 1020
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRV 280
+ D+DW CP R+S SG+Y+ +G + ISWKSKKQT ++ SSA+AEYRSM V
Sbjct: 1021 YCDADWAGCPMDRRSTSGYYVFIGGNLISWKSKKQTVVAWSSAEAEYRSMAMV 1073
Score = 66.2 bits (160), Expect(3) = 2e-44
Identities = 29/57 (50%), Positives = 37/57 (64%)
Frame = -2
Query: 290 CEGLPVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQ 120
CE L + + D+QA HIA PVFHERTK +EIDCHF+R++ L I F+ S Q
Sbjct: 1090 CEELQMKLYCDNQAALHIASNPVFHERTKHIEIDCHFIREKLLSKEIVTEFIGSNDQ 1146
Score = 48.1 bits (113), Expect(3) = 2e-44
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLDP 608
YFLGIEV + G++ SQ+K+ +D+L+E ++ PV SP+DP
Sbjct: 894 YFLGIEVAQSGDGIVISQKKYALDILEETGMQNCRPVESPMDP 936
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 118 bits (295), Expect(3) = 3e-44
Identities = 60/113 (53%), Positives = 79/113 (69%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ L TR D A++V LSQ+MQ+PR H AALRV+ YL PG G+ L A S L G
Sbjct: 1246 LIYLAVTRPDLAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQG 1305
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRV 280
+ DSDW CP +++S+SG+ + LG SPISWK+KKQ ++S SSA+AEYR+M V
Sbjct: 1306 WCDSDWAACPVTKRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAV 1358
Score = 70.9 bits (172), Expect(3) = 3e-44
Identities = 30/48 (62%), Positives = 38/48 (79%)
Frame = -2
Query: 260 DSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQL 117
DSQ+ H+AK PVFHERTK +E+DCHFVR DGLI+ S+VP+ +QL
Sbjct: 1385 DSQSALHMAKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYVPTVTQL 1432
Score = 38.1 bits (87), Expect(3) = 3e-44
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIEV R GL QRK+T+D++ E P P++
Sbjct: 1179 YFLGIEVARSSAGLFLCQRKYTLDIVSEAGLLGAKPCGFPIE 1220
>ref|XP_006359191.1| PREDICTED: uncharacterized protein LOC102580453 [Solanum tuberosum]
Length = 402
Score = 142 bits (358), Expect(2) = 2e-43
Identities = 67/115 (58%), Positives = 88/115 (76%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L LT+TR D ++VQHLSQ+MQ PR+PHL AA VLRYL +DP LG+F++ +
Sbjct: 37 LNFLTNTRMDLTYSVQHLSQFMQSPREPHLKAAYHVLRYLKQDPTLGIFISNKYDLTVTA 96
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRVAG 274
+ DSDW CP+SRKSVSG+ + +G SP+SWKSKKQ ++SLSSAKAEYR++R+V G
Sbjct: 97 YCDSDWAACPDSRKSVSGYLVLMGDSPVSWKSKKQATMSLSSAKAEYRAVRQVVG 151
Score = 60.8 bits (146), Expect(2) = 2e-43
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = -2
Query: 281 LPVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGL 153
LP+ DSQA HIAK PVFHERTK +E+DCHFV+ + GL
Sbjct: 169 LPMHVFCDSQAAVHIAKNPVFHERTKHIEVDCHFVKNKLQQGL 211
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 120 bits (301), Expect(3) = 8e-43
Identities = 58/110 (52%), Positives = 80/110 (72%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
LL L HTR + +++V L+Q+MQ+PR+ H AALRV+RYL PG G+ LNA L
Sbjct: 1286 LLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEV 1345
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSM 289
+ DSDW +CP +R+S+S + + LG SPISWK+KKQ ++S SSA+AEYR+M
Sbjct: 1346 YCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAM 1395
Score = 61.6 bits (148), Expect(3) = 8e-43
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Frame = -2
Query: 287 EGLPVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQLTGT 108
+ P + DS+A HIA PVFHERTK +E DCH VR DG+I+ V +T QL
Sbjct: 1416 QSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHSVRDAVRDGIITTQHVRTTEQLADV 1475
Query: 107 VHHR--------ILGTLGVLSFPTP 57
++ LGV + TP
Sbjct: 1476 FTKALGRNQFLYLMSKLGVQNLHTP 1500
Score = 40.0 bits (92), Expect(3) = 8e-43
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIEV R P+G+ SQRK+ +D++ + P +PL+
Sbjct: 1219 YFLGIEVSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLE 1260
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 124 bits (310), Expect(3) = 8e-43
Identities = 61/114 (53%), Positives = 84/114 (73%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ L TR D AF+V L+++MQ+PR+ H AALRV+RYL DPG G+FL S F++ G
Sbjct: 1118 LIYLAVTRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITG 1177
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRVA 277
+ DSDW P SR+SV+G+++ G SPISWK+KKQ ++S SSA+AEYR+M +A
Sbjct: 1178 WCDSDWAGDPMSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEAEYRAMSFLA 1231
Score = 58.9 bits (141), Expect(3) = 8e-43
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -2
Query: 278 PVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQL 117
P+ DS++ +IA PVFHERTK +EID HFVR +F+ G+I+ V +TSQL
Sbjct: 1251 PMIMCCDSKSAIYIATNPVFHERTKHIEIDYHFVRDEFVKGVITPRHVGTTSQL 1304
Score = 39.3 bits (90), Expect(3) = 8e-43
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -3
Query: 745 PYHYFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
P YFLGIEV R G+ QRK+ +D++ E + P PL+
Sbjct: 1048 PLKYFLGIEVARSTTGIYICQRKYALDIISETGLLGVKPANFPLE 1092
>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
Length = 1813
Score = 121 bits (304), Expect(3) = 2e-42
Identities = 63/110 (57%), Positives = 80/110 (72%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ LT TR D ++V+ LSQ+M PR+PH AALRVLRY+ PG GLFL + ++ L
Sbjct: 1514 LIYLTVTRPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSA 1573
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSM 289
F DSDW C SR+SVSG+ + LG S ISWKSKKQT++S SSA+AEYR+M
Sbjct: 1574 FCDSDWGGCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAM 1623
Score = 60.1 bits (144), Expect(3) = 2e-42
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = -2
Query: 278 PVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQL 117
P P D+QA +IA PVFHERTK +EIDCH VR++ G+I +V + QL
Sbjct: 1647 PAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGVIRPCYVSTKMQL 1700
Score = 39.3 bits (90), Expect(3) = 2e-42
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIE R +G+ SQRK+T+D+L++ + P P++
Sbjct: 1447 YFLGIEFSRSKKGIFMSQRKYTLDILQDTGLTGVKPEKFPME 1488
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 117 bits (293), Expect(3) = 2e-42
Identities = 54/110 (49%), Positives = 86/110 (78%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ L TR + +++V L+Q+MQ+PRQ H AA+RV+RYL +PG G+ L+++S+ ++ G
Sbjct: 894 LIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQING 953
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSM 289
+ DSD+ CP +R+S++G+++ LG +PISWK+KKQ +IS SSA+AEYR+M
Sbjct: 954 WCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAEAEYRAM 1003
Score = 63.2 bits (152), Expect(3) = 2e-42
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -2
Query: 263 SDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQL 117
SDS++ ++ PV HERTK VE+DCHF+R LDG+I+ SFVPS QL
Sbjct: 1032 SDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQL 1080
Score = 40.4 bits (93), Expect(3) = 2e-42
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIEV R QG SQRK+ +D++ E P PL+
Sbjct: 827 YFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLE 868
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 117 bits (292), Expect(3) = 2e-42
Identities = 53/110 (48%), Positives = 86/110 (78%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ L TR + +++V L+Q+MQ+PRQ H AA+RV+RYL +PG G+ L+++S+ ++ G
Sbjct: 1253 LIYLVVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQING 1312
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSM 289
+ DSD+ CP +R+S++G+++ LG +PISWK+KKQ ++S SSA+AEYR+M
Sbjct: 1313 WCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAM 1362
Score = 63.2 bits (152), Expect(3) = 2e-42
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -2
Query: 263 SDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQL 117
SDS++ ++ PV HERTK VE+DCHF+R LDG+I+ SFVPS QL
Sbjct: 1391 SDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQL 1439
Score = 40.4 bits (93), Expect(3) = 2e-42
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIEV R QG SQRK+ +D++ E P PL+
Sbjct: 1186 YFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLE 1227
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 117 bits (292), Expect(3) = 2e-42
Identities = 53/110 (48%), Positives = 86/110 (78%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ L TR + +++V L+Q+MQ+PRQ H AA+RV+RYL +PG G+ L+++S+ ++ G
Sbjct: 894 LIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQING 953
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSM 289
+ DSD+ CP +R+S++G+++ LG +PISWK+KKQ ++S SSA+AEYR+M
Sbjct: 954 WCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAM 1003
Score = 63.2 bits (152), Expect(3) = 2e-42
Identities = 28/49 (57%), Positives = 36/49 (73%)
Frame = -2
Query: 263 SDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQL 117
SDS++ ++ PV HERTK VE+DCHF+R LDG+I+ SFVPS QL
Sbjct: 1032 SDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQL 1080
Score = 40.4 bits (93), Expect(3) = 2e-42
Identities = 19/42 (45%), Positives = 24/42 (57%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIEV R QG SQRK+ +D++ E P PL+
Sbjct: 827 YFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLE 868
>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
Length = 1279
Score = 118 bits (296), Expect(3) = 4e-42
Identities = 58/110 (52%), Positives = 78/110 (70%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ LT TR D ++V LS++M PR+PH+ AALRVLRYL PG GLF + + L
Sbjct: 1064 LIYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRA 1123
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSM 289
F DSDW CP SR+S +G+ + LG S ISW++K+Q ++SLSSA+AEYR+M
Sbjct: 1124 FSDSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAM 1173
Score = 60.8 bits (146), Expect(3) = 4e-42
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = -2
Query: 278 PVPFHSDSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQLTGT--- 108
P + D+ A HIA PVFHERT+ +E+DCHF+R + DG + + ST QL
Sbjct: 1197 PALLYCDNTAALHIAANPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIASTBQLADVFTK 1256
Query: 107 -----VHHRILGTLGVLSFPTP 57
++ LGVL +P
Sbjct: 1257 PLGKETFSTMIHKLGVLDIHSP 1278
Score = 40.4 bits (93), Expect(3) = 4e-42
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKEFDAEHLPPVCSPLD 611
YFLGIEV R +G+ SQRK+T+++LK+ PV P++
Sbjct: 998 YFLGIEVSRSKKGISISQRKYTLEILKDGGFLGAKPVNFPME 1039
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 112 bits (280), Expect(3) = 5e-42
Identities = 58/113 (51%), Positives = 77/113 (68%)
Frame = -1
Query: 618 LLILTHTRQDRAFTVQHLSQYMQDPRQPHLTAALRVLRYLCKDPGLGLFLNASSSFKLLG 439
L+ L TR + A++V LSQ+MQ+PR H ALRV+ YL PG G+ L A S L G
Sbjct: 914 LIYLAVTRPNLAYSVHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDLSLQG 973
Query: 438 FGDSDW*TCPNSRKSVSGFYISLGWSPISWKSKKQTSISLSSAKAEYRSMRRV 280
+ DSDW CP +R+S+SG+ + LG S ISWK+KKQ ++S SSA+AEYR+M V
Sbjct: 974 WCDSDWAACPVTRRSLSGWLVFLGQSHISWKTKKQHTVSRSSAEAEYRAMAAV 1026
Score = 69.3 bits (168), Expect(3) = 5e-42
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = -2
Query: 260 DSQAVTHIAKKPVFHERTKDVEIDCHFVRQQFLDGLISVSFVPSTSQL 117
DSQ+ H+ K PVFHERTK +E+DCHFVR DGLI+ S+VP+ +QL
Sbjct: 1053 DSQSALHMTKNPVFHERTKHIEVDCHFVRDAITDGLIAPSYVPTVTQL 1100
Score = 37.7 bits (86), Expect(3) = 5e-42
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 736 YFLGIEVLREPQGLIFSQRKFTIDLLKE 653
YFLGIEV R GL QRK+T+D++ E
Sbjct: 847 YFLGIEVARSSAGLFLCQRKYTLDIVSE 874