BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00024133
         (475 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341672.1| PREDICTED: pentatricopeptide repeat-containi...   219   3e-55
ref|XP_004236410.1| PREDICTED: pentatricopeptide repeat-containi...   216   3e-54
ref|XP_004305601.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
gb|EXB60441.1| hypothetical protein L484_014894 [Morus notabilis]      62   8e-08
ref|XP_006287361.1| hypothetical protein CARUB_v10000559mg [Caps...    60   2e-07
ref|XP_006394734.1| hypothetical protein EUTSA_v10003880mg [Eutr...    59   5e-07
ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...    57   3e-06
gb|EPS60164.1| hypothetical protein M569_14641, partial [Genlise...    57   3e-06

>ref|XP_006341672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Solanum tuberosum]
          Length = 579

 Score =  219 bits (558), Expect = 3e-55
 Identities = 114/129 (88%), Positives = 117/129 (90%), Gaps = 1/129 (0%)
 Frame = +2

Query: 92  MQPLLLVSEESQILLRILNGSFQTLDIIKDRIFHDFADLFCSKANLDVIDMRQDNVQ-SV 268
           MQPLLLVSEESQ LLRILNGSFQTLDIIKDRIFHDFA+LFCSKANLDVIDMRQDNV  SV
Sbjct: 1   MQPLLLVSEESQFLLRILNGSFQTLDIIKDRIFHDFANLFCSKANLDVIDMRQDNVMHSV 60

Query: 269 NRDEQGSKDWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSMRERISSAEAGISNCTL 448
           NRDE GSKDWSSKGN+ N EGDST  F+VLD MLKRSLDRLKSMRERISSAEAGI  CT 
Sbjct: 61  NRDELGSKDWSSKGNNSNPEGDSTAGFSVLDTMLKRSLDRLKSMRERISSAEAGIDYCTW 120

Query: 449 EINFNKDAY 475
           EINFNKDAY
Sbjct: 121 EINFNKDAY 129


>ref|XP_004236410.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Solanum lycopersicum]
          Length = 379

 Score =  216 bits (549), Expect = 3e-54
 Identities = 112/129 (86%), Positives = 117/129 (90%), Gaps = 1/129 (0%)
 Frame = +2

Query: 92  MQPLLLVSEESQILLRILNGSFQTLDIIKDRIFHDFADLFCSKANLDVIDMRQDNVQ-SV 268
           MQPLLLVSEESQ LLRILNGSFQTLDIIKDRIFHDFA+LFCSKANLDVIDMRQ+NV  SV
Sbjct: 1   MQPLLLVSEESQFLLRILNGSFQTLDIIKDRIFHDFANLFCSKANLDVIDMRQENVMHSV 60

Query: 269 NRDEQGSKDWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSMRERISSAEAGISNCTL 448
           NRDE GSKDWSSKGN+ N EGDST  F+VLD MLKRSLDRLKSMRERIS AEAGI+ CT 
Sbjct: 61  NRDELGSKDWSSKGNNSNPEGDSTAGFSVLDTMLKRSLDRLKSMRERISLAEAGINYCTW 120

Query: 449 EINFNKDAY 475
           EINFNKDAY
Sbjct: 121 EINFNKDAY 129


>ref|XP_004305601.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Fragaria vesca subsp. vesca]
          Length = 589

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 47/117 (40%), Positives = 64/117 (54%), Gaps = 7/117 (5%)
 Frame = +2

Query: 131 LLRILNGSFQTLDIIKDRIFHDFADLFCSKANLDVIDMRQDNVQSVNRDEQGSK------ 292
           L R LN   +TLD IKD I   FA++   +A+ D  + R + V   + +E   K      
Sbjct: 17  LFRSLN---RTLDSIKDNIAVIFANILACQAHSDD-NFRSEEVVPSSFEELMEKYKHLSA 72

Query: 293 -DWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSMRERISSAEAGISNCTLEINF 460
            DW SK  +   + D    FNVLD MLK +L+RLK+MRE IS A+ G   CT +IN+
Sbjct: 73  GDWFSKKRNAGNDQDPQAEFNVLDTMLKDNLERLKTMRESISVAKIGFLGCTSKINY 129


>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
 Frame = +2

Query: 101 LLLVSEESQILLRILNGSFQTLDIIKDRIFHDFADLFCSK------------ANLDVIDM 244
           L +V +ES +  R+ N   ++   IK  +   FA++F  K             NL    +
Sbjct: 3   LSIVFQESHVFFRLFNACIES---IKHDVAQIFANVFSFKPYSPANNRPSGHGNLLPFAL 59

Query: 245 RQDNVQSVNRDEQGSKDWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSMRERISSAE 424
               +   N+ +  ++DW S+    + E D  V FNVLDA+LK SL+RLK MRE +S  +
Sbjct: 60  EDLIISVGNQYQVTTQDWFSQNKGHDEERDPRVVFNVLDAILKDSLERLKMMRESVSLTK 119

Query: 425 AGISNCTLEINF 460
            G++ CTLE+++
Sbjct: 120 IGLNGCTLEMDY 131


>gb|EXB60441.1| hypothetical protein L484_014894 [Morus notabilis]
          Length = 591

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 104 LLVSEESQILLRILNGSFQTLDIIKDRIFHDFADLFCSKANLDVIDMRQDNVQSVNRDEQ 283
           ++  E S   +  L    +T+D IKD I   FA++F S+ N       ++ +  +  + Q
Sbjct: 18  IVCGESSPSYISFLRTLNRTVDSIKDNIAQIFANIFYSRRNNVADASFEELLGKLGENCQ 77

Query: 284 -GSKDWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSMRERISSAEAGISNCTLEINF 460
            G+++   K ND N E D    FNVLD+MLK SLD LK+MRE I+  +      T + N+
Sbjct: 78  LGAEELFPKKNDVNGEQDPQAVFNVLDSMLKESLDHLKTMRESITWPKMASLGWTRDANY 137

Query: 461 NK 466
            +
Sbjct: 138 QE 139


>ref|XP_006287361.1| hypothetical protein CARUB_v10000559mg [Capsella rubella]
           gi|482556067|gb|EOA20259.1| hypothetical protein
           CARUB_v10000559mg [Capsella rubella]
          Length = 582

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
 Frame = +2

Query: 110 VSEESQILLRILNGSFQTLDIIKDRIFHDFADLFCSKANLDVIDMRQDNVQS-----VNR 274
           VS     +LR+LN   Q+LD + D +   FA +F    NL   +MR   ++      VN 
Sbjct: 10  VSSSQVTVLRLLN---QSLDFVSDNVARIFAPIF---TNLRDFEMRLSCIERPQSTPVNH 63

Query: 275 DEQGSKDWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSMRERI 412
               +++W S   D + +GD    FNVLD++LK SLDRL S+RE +
Sbjct: 64  THSCAENWFSDRKDYDQKGDPEAIFNVLDSILKSSLDRLASLRESV 109


>ref|XP_006394734.1| hypothetical protein EUTSA_v10003880mg [Eutrema salsugineum]
           gi|557091373|gb|ESQ32020.1| hypothetical protein
           EUTSA_v10003880mg [Eutrema salsugineum]
          Length = 590

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
 Frame = +2

Query: 110 VSEESQILLRILNGSFQTLDIIKDRIFHDFADLFCSKANLDVIDMRQDNVQSVNRDEQG- 286
           VS     +LR+LN   Q+LD + D +   FA +F +  + ++     D  QS+  D    
Sbjct: 10  VSSSQFTVLRLLN---QSLDFVSDNVSRIFARIFTNLRDFEMRLSCTDRPQSIPVDHSHL 66

Query: 287 -SKDWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSMRERI 412
            +++W S   D + +GD    FNVLD++LK SLDRL S+RE +
Sbjct: 67  YTENWFSDKKDYDQKGDPEAIFNVLDSILKSSLDRLASLRESV 109


>ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
           gi|449499387|ref|XP_004160802.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
          Length = 633

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 13/136 (9%)
 Frame = +2

Query: 101 LLLVSEESQIL-LRILNGSFQTLDIIKDRIFHDFADLFCSKANLDVIDMRQDNVQSVN-- 271
           L + S  SQIL L  L+G+  +L     R+F     +F  + ++D      ++  S++  
Sbjct: 5   LAIESAPSQILVLGFLHGALNSLKRDISRMFA----VFYGRPDIDEAARSNEDEDSLHPA 60

Query: 272 ----------RDEQGSKDWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSMRERISSA 421
                       +  S D  S+  + N EGD    FNVLDA+LK SLDRLK+MRE I  A
Sbjct: 61  LKSLMTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLA 120

Query: 422 EAGISNCTLEINFNKD 469
           ++G+  C LE     D
Sbjct: 121 KSGLQKCVLEATQQPD 136


>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
 Frame = +2

Query: 92  MQPLLLVSEESQ-----ILLRILNGSFQTLDIIKDRIFHDFADLFCSKANLD--VIDMRQ 250
           M  LL+   ES       LLR+L+   + +D IK      FA++FC ++ +D        
Sbjct: 1   MAALLISCGESSASSHIFLLRLLD---RAMDTIKHHTAQIFANIFCRESIIDPNASYFFD 57

Query: 251 DNVQSVNRDEQGSKDWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSMRER--ISSAE 424
           D V++++   +  +D      + N E D  V FNVLDAMLK SL+RLKSMRE   ISS +
Sbjct: 58  DMVKTLSNRCRLRRD----NKNLNDEDDPQVVFNVLDAMLKGSLERLKSMRESIGISSVK 113

Query: 425 AGISNCTLEINF 460
            G++  ++++++
Sbjct: 114 VGLAGRSVDVSY 125


>gb|EPS60164.1| hypothetical protein M569_14641, partial [Genlisea aurea]
          Length = 86

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 40/100 (40%), Positives = 55/100 (55%)
 Frame = +2

Query: 101 LLLVSEESQILLRILNGSFQTLDIIKDRIFHDFADLFCSKANLDVIDMRQDNVQSVNRDE 280
           LL+  +ES ++LRILNGSF  ++ +KD+    F   F SK+N +      D         
Sbjct: 1   LLIPIQESCLILRILNGSFHAIEALKDQFAIRFTSFFESKSNAEFFYSSVD--------- 51

Query: 281 QGSKDWSSKGNDPNWEGDSTVSFNVLDAMLKRSLDRLKSM 400
           Q + ++    N  N + D+   FN LDAMLK SLDRLKSM
Sbjct: 52  QNAMEFP---NGANPKRDAV--FNSLDAMLKGSLDRLKSM 86