BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00023995
         (1326 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            285   4e-87
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   275   5e-84
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]   258   5e-80
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   262   2e-79
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]   254   4e-79
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]   258   6e-79
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   255   3e-78
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   254   1e-77
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]   248   4e-77
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]   249   7e-76
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]   243   2e-75
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]   253   5e-75
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   247   1e-74
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   253   2e-74
emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera]   244   3e-74
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   239   1e-73
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   239   1e-73
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...   242   2e-73
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha...   239   2e-73
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380...   242   2e-73

>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  285 bits (728), Expect(3) = 4e-87
 Identities = 167/344 (48%), Positives = 211/344 (61%), Gaps = 2/344 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            KVC+L KSLY LKQA RQWN KLT  L    F+Q   DY LFT     +           
Sbjct: 1061 KVCKLLKSLYGLKQASRQWNLKLTKVLQATGFSQSAHDYSLFTLKRGEDIVIVLVYVDDL 1120

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            L+TG+  +LI + +  L  +FK+KDLG LKFFLGIE  +SS GI+++QRKY         
Sbjct: 1121 LITGSNMQLIAEVKACLHKQFKLKDLGELKFFLGIEVLRSSGGIILNQRKYILELIAEAG 1180

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMT 643
               AKPA  P+E NL  + VE D   QA   +K    D VL D + YQRLIG L+Y+T+T
Sbjct: 1181 LTGAKPATAPMESNLRLTSVEHD---QANGYNK----DDVLHDITSYQRLIGKLIYVTIT 1233

Query: 642  RIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG 463
            R DISY VQ LSQF   PK SH +AA RV+RY+KGS G GV + S  +  +   CDSDW 
Sbjct: 1234 RPDISYAVQTLSQFMQSPKKSHIEAATRVIRYLKGSVGQGVWLHSEPTNIITCWCDSDWA 1293

Query: 462  VA*N*--GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKEL 289
               N    +  +V+ FG                SSAEAE+RSMASAV+E+TWLLG+FKEL
Sbjct: 1294 ACPNTRRSITGYVIKFGE---------------SSAEAEYRSMASAVSEITWLLGLFKEL 1338

Query: 288  GVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFVEKKL 157
            GV++ LP+ +F DSK+ IQ+A N + YERTK I+IDCHF+  K+
Sbjct: 1339 GVNVQLPITIFSDSKSAIQLAANPVLYERTKHIEIDCHFIRDKI 1382



 Score = 47.4 bits (111), Expect(3) = 4e-87
 Identities = 23/45 (51%), Positives = 32/45 (71%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGFAGQG 1190
            V  V+A+A S+   + QMDV+NAF+QG L E+VYM + +GFA  G
Sbjct: 1014 VRCVIALAVSKGWTLYQMDVYNAFLQGVLGEEVYMKMPEGFAKPG 1058



 Score = 39.7 bits (91), Expect(3) = 4e-87
 Identities = 19/42 (45%), Positives = 27/42 (64%)
 Frame = -3

Query: 175  FCGEKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKL 50
            F  +KI  G   T +V T++Q+AD+LTK L +  H +LL KL
Sbjct: 1377 FIRDKIKAGEVNTAYVHTQQQLADILTKGLSQVQHVHLLGKL 1418


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  275 bits (702), Expect(3) = 5e-84
 Identities = 161/344 (46%), Positives = 203/344 (59%), Gaps = 3/344 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRL KS+Y LKQA R W    T  +    + Q   DY LFTK    +           L
Sbjct: 1358 VCRLRKSIYGLKQASRNWFSTFTATVKSAGYIQSKADYSLFTKSQGNKFTAILIYVDDIL 1417

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            +TGN    I   +  L  +F +KDLG LK+FLGIEFS+S KGI MSQRKY          
Sbjct: 1418 LTGNDLHEIKMLKTHLLKRFFIKDLGELKYFLGIEFSRSKKGIFMSQRKYTLDILQDTGL 1477

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLV-DPSQYQRLIGILLYLTMT 643
               KP   P+E NL                 KL   DG L+ DPS+Y+RL+G L+YLT+T
Sbjct: 1478 TGVKPEKFPMEQNL-----------------KLTNEDGELLHDPSRYRRLVGRLIYLTVT 1520

Query: 642  RIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG 463
            R DI Y V+ LSQF + P+  H +AALRV+RYIKGSPG G+ +PS N+  L   CDSDWG
Sbjct: 1521 RPDIVYSVRTLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCDSDWG 1580

Query: 462  VA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKEL 289
                    V  + V  G ++IS KSKKQ  V+RSSAEAE+R+MA+   E+TWL  + K+L
Sbjct: 1581 GCRMSRRSVSGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILKDL 1640

Query: 288  GVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFVEKKL 157
             V LD P  LFCD++A + IA N +F+ERTK I+IDCH V +KL
Sbjct: 1641 KVELDKPAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKL 1684



 Score = 46.2 bits (108), Expect(3) = 5e-84
 Identities = 23/42 (54%), Positives = 29/42 (69%)
 Frame = -3

Query: 1315 VLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGFAGQG 1190
            +L +AASRN  I Q+DVHNAF+ G+L E+VYM    G   QG
Sbjct: 1313 LLTVAASRNWYIHQLDVHNAFLHGNLQEEVYMTPPPGLRRQG 1354



 Score = 40.4 bits (93), Expect(3) = 5e-84
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKL 50
            EK+  GV +  +VSTK Q+AD+ TK LG++  ++L +KL
Sbjct: 1682 EKLQAGVIRPCYVSTKMQLADVFTKALGREQFEFLCTKL 1720


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score =  258 bits (658), Expect(3) = 5e-80
 Identities = 145/339 (42%), Positives = 197/339 (58%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRL KSLY LKQAPR W  KL  AL    F Q + DY LFT                 +
Sbjct: 728  VCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLI 787

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            ++GN    +   +  L   FKMKDLG LK+FLGIE ++SS G+ + QRKY          
Sbjct: 788  ISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGL 847

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMTR 640
              AKP G P+E N        +                +L +P  Y+RL+G L+YL +TR
Sbjct: 848  LGAKPCGFPIEQNHRLGLANGE----------------LLSNPESYRRLVGRLIYLAVTR 891

Query: 639  IDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWGV 460
             D++Y V +LSQF H+P+  H +AALRVVRY+KG+PG G+L+ + +   L+  CDSDW  
Sbjct: 892  PDLAYSVHILSQFMHEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAA 951

Query: 459  A*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKELG 286
                   +  W+V  G++ IS K+KKQ TV+RSSAEAE+R+MA+   E+ WL G+   LG
Sbjct: 952  CPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLG 1011

Query: 285  VHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            VH    + LFCDS++ + +A N +F+ERTK I++DCHFV
Sbjct: 1012 VHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFV 1050



 Score = 50.4 bits (119), Expect(3) = 5e-80
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            V + LAIAAS+N  + QMDVHNAF+ GDL E+VYM +  GF
Sbjct: 680  VRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGF 720



 Score = 39.7 bits (91), Expect(3) = 5e-80
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = -3

Query: 175  FCGEKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQP 26
            F  + I  G+    +V T  Q+AD+ TK LGK+  DYLL+KL    IF+P
Sbjct: 1049 FVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKL---GIFEP 1095


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  262 bits (670), Expect(3) = 2e-79
 Identities = 155/341 (45%), Positives = 201/341 (58%), Gaps = 3/341 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            KVCRL KSLY LKQAPR W KKL+ +L+   F Q + DY LF+                 
Sbjct: 1129 KVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIELRVLIYVDDL 1188

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            L+ GN   ++ + ++ L   F MKDLG LK+FLGIE S+  +GI +SQRKY         
Sbjct: 1189 LICGNDGYMLQKFKDYLSRCFSMKDLGKLKYFLGIEVSRGPEGIFLSQRKYALDVIADSG 1248

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLV-DPSQYQRLIGILLYLTM 646
               ++PA TPLE N +                 L   DG L+ DP  Y+RL+G LLYL  
Sbjct: 1249 NLGSRPAHTPLEQNHH-----------------LASDDGPLLSDPKPYRRLVGRLLYLLH 1291

Query: 645  TRIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDW 466
            TR ++SY V VL+QF   P+ +H DAALRVVRY+KGSPG G+L+ +     LEV CDSDW
Sbjct: 1292 TRPELSYSVHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCDSDW 1351

Query: 465  GVA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKE 292
                     +  +VV  G + IS K+KKQ TV+ SSAEAE+R+M+ A+ E+ WL  + KE
Sbjct: 1352 QSCPLTRRSISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKWLRKLLKE 1411

Query: 291  LGVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            LG+    P  L+CDSKA I IA N +F+ERTK I+ DCH V
Sbjct: 1412 LGIEQSTPARLYCDSKAAIHIAANPVFHERTKHIESDCHSV 1452



 Score = 42.0 bits (97), Expect(3) = 2e-79
 Identities = 20/41 (48%), Positives = 27/41 (65%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            V ++L   A+    + QMDVHNAF+ GDL E+VYM +  GF
Sbjct: 1082 VRTLLRNVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGF 1122



 Score = 42.0 bits (97), Expect(3) = 2e-79
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQPS 23
            + +  G+  T HV T EQ+AD+ TK LG+    YL+SKL ++++  P+
Sbjct: 1454 DAVRDGIITTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNLHTPT 1501


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score =  254 bits (650), Expect(3) = 4e-79
 Identities = 146/339 (43%), Positives = 199/339 (58%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRL KSLY LKQAPR W  KL  AL    F Q + DY LFT                 +
Sbjct: 807  VCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLI 866

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            ++GN    +   +  L   FKMKDLG LK+FLGIE ++SS G+ + QRKY          
Sbjct: 867  ISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGL 926

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMTR 640
              AKP G P+E N         +L  A  +        +L +P  Y+RL+G L+YL +TR
Sbjct: 927  LGAKPCGFPIEQN--------HRLXLANGE--------LLSNPESYRRLVGRLIYLAVTR 970

Query: 639  IDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWGV 460
             D++Y V +LSQF  +P+  H +AALRVVRY+KG+PG G+L+ + +   L+  CDSDW  
Sbjct: 971  PDLAYSVHILSQFMXEPRIEHWEAALRVVRYLKGTPGQGILLRADSDLSLQGWCDSDWAA 1030

Query: 459  A*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKELG 286
                   +  W+V  G++ IS K+KKQ TV+RSSAEAE+R+MA+   E+ WL G+   LG
Sbjct: 1031 CPVTRRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLG 1090

Query: 285  VHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            VH    + LFCDS++ + +A N +F+ERTK I++DCHFV
Sbjct: 1091 VHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFV 1129



 Score = 50.4 bits (119), Expect(3) = 4e-79
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            V + LAIAAS+N  + QMDVHNAF+ GDL E+VYM +  GF
Sbjct: 759  VRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGF 799



 Score = 39.7 bits (91), Expect(3) = 4e-79
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = -3

Query: 175  FCGEKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQP 26
            F  + I  G+    +V T  Q+AD+ TK LGK+  DYLL+KL    IF+P
Sbjct: 1128 FVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKL---GIFEP 1174


>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
          Length = 1523

 Score =  258 bits (658), Expect(3) = 6e-79
 Identities = 147/345 (42%), Positives = 202/345 (58%), Gaps = 3/345 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            +VC+LHKSLY LKQA RQW  KL+ AL    F Q   DY LF +  +             
Sbjct: 1106 RVCKLHKSLYGLKQASRQWFLKLSSALKAAGFKQSWSDYSLFXRNTQGRFTTLLVYVDDV 1165

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            ++ GN  + I++T+  L   FK+KD+G L++FLGIE ++S +GIV+ QRKY         
Sbjct: 1166 ILAGNSLEDIIETKQFLASHFKLKDMGQLRYFLGIEVARSKQGIVLCQRKYALELLEDAG 1225

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGV-LVDPSQYQRLIGILLYLTM 646
               AKP+  P+E +L                  L   DG  L D SQY+RL+G L+YLT+
Sbjct: 1226 FLGAKPSRFPVEQSLT-----------------LTRGDGAELKDASQYRRLVGRLIYLTI 1268

Query: 645  TRIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDW 466
            TR D+ Y V +LSQF   P+  H DAA +V+RY+K +PG G+ +PS     L   CD+DW
Sbjct: 1269 TRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCDADW 1328

Query: 465  GVA*N*--GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKE 292
                +       + + FG A IS K+KKQ TV+RSSAEAE+RSMA+   E+TWL  +  +
Sbjct: 1329 ARCKDTRRSTTGYCIFFGNAPISWKTKKQGTVSRSSAEAEYRSMATTCCEITWLRSLLAD 1388

Query: 291  LGVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFVEKKL 157
            L V+    V LFCD++A I IA N +F+ERTK I++DCH V +K+
Sbjct: 1389 LNVNHAHAVKLFCDNQAAIHIASNPVFHERTKHIEMDCHVVREKV 1433



 Score = 43.5 bits (101), Expect(3) = 6e-79
 Identities = 20/39 (51%), Positives = 27/39 (69%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKL 50
            EK+ +G+ KT+H+ T+EQ ADL TK L  +    LLSKL
Sbjct: 1431 EKVQRGLVKTMHIRTQEQPADLFTKPLSSKQFSTLLSKL 1469



 Score = 43.1 bits (100), Expect(3) = 6e-79
 Identities = 20/48 (41%), Positives = 32/48 (66%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGFAGQGVHQ 1181
            V  +L++A+ +   + Q+DV+NAF+ GDL E VYM +  GF  +G H+
Sbjct: 1059 VRVLLSLASIQGWHLHQLDVNNAFLNGDLYEDVYMQLPPGFGRKGEHR 1106


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  255 bits (651), Expect(3) = 3e-78
 Identities = 155/341 (45%), Positives = 199/341 (58%), Gaps = 3/341 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            KVCRL KSLY LKQAPR W KKL+ AL    F Q + DY  F+   K             
Sbjct: 1119 KVCRLRKSLYGLKQAPRCWFKKLSDALKRFGFIQGYEDYSFFSYSCKGIELRVLVYVDDL 1178

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            ++ GN   ++ + +  L   F MKDLG LK+FLGIE S+   GI +SQRKY         
Sbjct: 1179 IICGNDEYMVQKFKEYLGRCFSMKDLGKLKYFLGIEVSRGPDGIFLSQRKYALDIISDSG 1238

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLV-DPSQYQRLIGILLYLTM 646
               A+PA TPLE N +                 L   DG L+ DP  ++RL+G LLYL  
Sbjct: 1239 TLGARPAYTPLEQNHH-----------------LASDDGPLLQDPKPFRRLVGRLLYLLH 1281

Query: 645  TRIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDW 466
            TR ++SY V VLSQF   P+ +H +AA+R+VRY+KGSPG G+L+ S     LEV CDSD+
Sbjct: 1282 TRPELSYSVHVLSQFMQAPREAHLEAAMRIVRYLKGSPGQGILLSSNKDLTLEVYCDSDF 1341

Query: 465  GVA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKE 292
                     +  +VV  G + IS K+KKQ TV+ SSAEAE+R+M+ A+ E+ WL  + KE
Sbjct: 1342 QSCPLTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALKEIKWLNKLLKE 1401

Query: 291  LGVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            LG+ L  P  LFCDSKA I IA N +F+ERTK I+ DCH V
Sbjct: 1402 LGITLAAPTRLFCDSKAAISIAANPVFHERTKHIERDCHSV 1442



 Score = 43.9 bits (102), Expect(3) = 3e-78
 Identities = 20/41 (48%), Positives = 28/41 (68%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            V ++L + A+    + QMDVHNAF+ GDL E+VYM +  GF
Sbjct: 1072 VRTLLRLVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGF 1112



 Score = 43.1 bits (100), Expect(3) = 3e-78
 Identities = 19/48 (39%), Positives = 31/48 (64%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQPS 23
            + +  G+  T HV T EQ+AD+ TK LG+    YL+SKL ++++  P+
Sbjct: 1444 DAVRDGIITTHHVRTSEQLADIFTKALGRNQFIYLMSKLGIQNLHTPT 1491


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  254 bits (649), Expect(3) = 1e-77
 Identities = 148/343 (43%), Positives = 195/343 (56%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRLHKSLY LKQA RQW  K + A+    + Q   DY LFT+                L
Sbjct: 1128 VCRLHKSLYGLKQASRQWFAKFSEAIQSAGYAQSRADYSLFTRKQGKSFTALLIYVDDIL 1187

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            +TGN    I  T+  L   F +KDLG LK+FLGIE S S  GI +SQRKY          
Sbjct: 1188 ITGNDPVSIATTKKFLHSHFHLKDLGDLKYFLGIEVSASKNGIFISQRKYALEIIEDAGL 1247

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMTR 640
              A P  TP+E  L  S    DK               +L D  +Y+RL+G L+YLT++R
Sbjct: 1248 LGAAPIDTPMERGLKLS----DK-------------SDLLKDQGRYRRLVGRLIYLTVSR 1290

Query: 639  IDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG- 463
             DI+Y V VLS+F HQP+ +H +AA RVVRY+K +PG G+   S N  RL   CDSDW  
Sbjct: 1291 PDITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRXYCDSDWAG 1350

Query: 462  -VA*N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKELG 286
                      + V  G ++IS +SK+Q TV+ SSAEAE+R+M  A  E+TWL  + K+LG
Sbjct: 1351 CPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYLLKDLG 1410

Query: 285  VHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFVEKKL 157
            V    P  L+CD+KA + IA N +F+ERT+ I++DCH++  K+
Sbjct: 1411 VLHKEPALLYCDNKAALHIAANPVFHERTRHIEMDCHYIRDKI 1453



 Score = 45.1 bits (105), Expect(3) = 1e-77
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGFAGQG 1190
            V  +LA+AA+R   I QMDV+NAF+ GDL E++YM+   G   QG
Sbjct: 1079 VRCLLALAAARGXSIHQMDVNNAFLHGDLHEEIYMSPPLGLRRQG 1123



 Score = 40.8 bits (94), Expect(3) = 1e-77
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQPS 23
            +KI  G   T HVS+  Q+AD+LTK LGK+    ++ KL ++DI  P+
Sbjct: 1451 DKIQDGSIITRHVSSAHQLADILTKPLGKEFFAPMIRKLGVQDIHSPT 1498


>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
          Length = 1461

 Score =  248 bits (633), Expect(3) = 4e-77
 Identities = 142/339 (41%), Positives = 194/339 (57%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRL KSLY LKQAPR W  KL  AL    F Q + DY LFT                 +
Sbjct: 1090 VCRLRKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLI 1149

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            ++GN    +   +  L   FKMKDLG LK+FLGIE ++SS G+ + QRKY          
Sbjct: 1150 ISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGL 1209

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMTR 640
              AKP G P+E N        + L   E+                Y+RL+G L+YL +TR
Sbjct: 1210 LGAKPCGFPIEQNHRLGLANGELLSNLES----------------YRRLVGRLIYLAVTR 1253

Query: 639  IDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWGV 460
             D++Y V +LSQF  +P+  H +AALRVV Y+KG+PG G+L+ + +   L+  CDSDW  
Sbjct: 1254 PDLAYSVHILSQFMQEPRIEHWEAALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDWAA 1313

Query: 459  A*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKELG 286
                   +  W+V  G++ IS K+KKQ TV+RSSAEAE+R+MA+   E+ WL G+   LG
Sbjct: 1314 CPVTKRSLSGWLVFLGQSPISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLG 1373

Query: 285  VHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            +H    + LFCDS++ + +A N +F+ERTK I++DCHFV
Sbjct: 1374 MHHPKAIKLFCDSQSALHMAKNPVFHERTKHIEVDCHFV 1412



 Score = 50.4 bits (119), Expect(3) = 4e-77
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            V + LAIAAS+N  + QMDVHNAF+ GDL E+VYM +  GF
Sbjct: 1042 VRTFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGF 1082



 Score = 39.7 bits (91), Expect(3) = 4e-77
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = -3

Query: 175  FCGEKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQP 26
            F  + I  G+    +V T  Q+AD+ TK LGK+  DYLL+KL    IF+P
Sbjct: 1411 FVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKL---GIFEP 1457


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score =  249 bits (635), Expect(3) = 7e-76
 Identities = 142/344 (41%), Positives = 199/344 (57%), Gaps = 3/344 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRL+KSLY LKQA R W +K +  + +  F Q   DY LFTK+               +
Sbjct: 1090 VCRLNKSLYGLKQASRSWFRKFSATIQQDGFHQSRADYSLFTKISGNSFTAVLIYVDDMI 1149

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            +TGN   +I   +  L  KF++KDLG L++FLGIE ++S+ GI +SQRKY          
Sbjct: 1150 ITGNDENVIAALKESLHTKFRIKDLGQLRYFLGIEVARSTDGISISQRKYTLDILDEAGL 1209

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDG-VLVDPSQYQRLIGILLYLTMT 643
              AKP  TP+E N                 +KL+P  G +L +PS Y+RL+G L+YLT+T
Sbjct: 1210 LGAKPLSTPMEEN-----------------NKLLPTVGDLLKNPSTYRRLVGQLIYLTIT 1252

Query: 642  RIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG 463
            R +ISY V +LSQF  +P+  H  A   ++RY+KG+PG G+  P+  +  L   CD+DW 
Sbjct: 1253 RPEISYSVHILSQFMQEPRKPHLHAVHHLLRYLKGAPGQGLYFPAKGNLLLRGFCDADWA 1312

Query: 462  VA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKEL 289
                    V  + +    A IS K+KKQ TV+RSS E+E+R+MAS   E+TWL  +  +L
Sbjct: 1313 RCSITRRSVTGYCIFLXGAXISWKTKKQTTVSRSSXESEYRAMASITCELTWLRYLLDDL 1372

Query: 288  GVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFVEKKL 157
             V    P  LFCDSKA + IA N +++ERTK I+IDCH V +++
Sbjct: 1373 KVEHSQPAKLFCDSKAALHIAANPVYHERTKHIEIDCHVVRERI 1416



 Score = 50.1 bits (118), Expect(3) = 7e-76
 Identities = 25/45 (55%), Positives = 32/45 (71%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGFAGQG 1190
            V  +LAIAA R+  + QMDV NAF+ GDL+E+VYM +  GF  QG
Sbjct: 1041 VRCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQLPLGFRQQG 1085



 Score = 35.0 bits (79), Expect(3) = 7e-76
 Identities = 20/48 (41%), Positives = 25/48 (52%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQPS 23
            E+I  G   T HV +  Q+ADL TK L       LLSK  + DI  P+
Sbjct: 1414 ERIQSGAIVTAHVPSSCQLADLFTKPLNSSIFHSLLSKFGVLDIHAPT 1461


>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
          Length = 1129

 Score =  243 bits (619), Expect(3) = 2e-75
 Identities = 139/339 (41%), Positives = 192/339 (56%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRL KSLY LKQAPR W  KL  AL    F Q + DY LFT                 +
Sbjct: 758  VCRLWKSLYGLKQAPRCWFAKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLI 817

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            ++GN    +   +  L   FKMKDLG LK+FLGIE ++SS G+ + QRKY          
Sbjct: 818  ISGNDSAALKTFKAYLSDCFKMKDLGVLKYFLGIEVARSSAGLFLCQRKYTLDIVSEAGL 877

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMTR 640
              AKP G  +E N        +                +L +P  Y+RL+G L+YL +TR
Sbjct: 878  LGAKPCGFSIEQNHRLGLANGE----------------LLSNPESYRRLVGRLIYLAVTR 921

Query: 639  IDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWGV 460
             +++Y V +LSQF  +P+  H + ALRVV Y+KG+PG G+L+ + +   L+  CDSDW  
Sbjct: 922  PNLAYSVHILSQFMQEPRIEHWEVALRVVHYLKGTPGQGILLRADSDLSLQGWCDSDWAA 981

Query: 459  A*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKELG 286
                   +  W+V  G++ IS K+KKQ TV+RSSAEAE+R+MA+   E+ WL G+   LG
Sbjct: 982  CPVTRRSLSGWLVFLGQSHISWKTKKQHTVSRSSAEAEYRAMAAVTCELKWLKGLLLSLG 1041

Query: 285  VHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            VH    + LFCDS++ + +  N +F+ERTK I++DCHFV
Sbjct: 1042 VHHPKAIKLFCDSQSALHMTKNPVFHERTKHIEVDCHFV 1080



 Score = 50.4 bits (119), Expect(3) = 2e-75
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            V + LAIAAS+N  + QMDVHNAF+ GDL E+VYM +  GF
Sbjct: 710  VRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGF 750



 Score = 39.7 bits (91), Expect(3) = 2e-75
 Identities = 22/50 (44%), Positives = 30/50 (60%)
 Frame = -3

Query: 175  FCGEKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQP 26
            F  + I  G+    +V T  Q+AD+ TK LGK+  DYLL+KL    IF+P
Sbjct: 1079 FVRDAITDGLIAPSYVPTVTQLADIFTKALGKKQFDYLLAKL---GIFEP 1125


>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
          Length = 1323

 Score =  253 bits (647), Expect(3) = 5e-75
 Identities = 149/343 (43%), Positives = 195/343 (56%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRLHKSLY LKQA RQW  K + A+    + Q   DY LFT                 L
Sbjct: 953  VCRLHKSLYGLKQASRQWFAKFSEAIQSAGYAQSRADYSLFTXKQGKSFTALLIYVDDIL 1012

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            +TGN    I  T+  L   F +KDLG LK+FLGIE S S  GI +SQRKY          
Sbjct: 1013 ITGNDPVSIATTKKFLHSHFHLKDLGDLKYFLGIEVSASKNGIFISQRKYALEIIEDAXL 1072

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMTR 640
              A P  TP+E  L  S    DK               +L D  +Y+RL+G L+YLT++R
Sbjct: 1073 LGAAPIDTPMERGLKLS----DK-------------SDLLKDQGRYRRLVGRLIYLTVSR 1115

Query: 639  IDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG- 463
             DI+Y V VLS+F HQP+ +H +AA RVVRY+K +PG G+   S N  RL   CDSDW  
Sbjct: 1116 PDITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRAYCDSDWAG 1175

Query: 462  -VA*N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKELG 286
                      + V  G ++IS +SK+Q TV+ SSAEAE+R+M  A  E+TWL  + K+LG
Sbjct: 1176 CPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYLLKDLG 1235

Query: 285  VHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFVEKKL 157
            V    P  L+CD+KA + IA N +F+ERT+ I++DCH++  K+
Sbjct: 1236 VLHKEPALLYCDNKAALHIAANPVFHERTRHIEMDCHYIRDKI 1278



 Score = 40.8 bits (94), Expect(3) = 5e-75
 Identities = 21/48 (43%), Positives = 31/48 (64%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQPS 23
            +KI  G   T HVS+  Q+AD+LTK LGK+    ++ KL ++DI  P+
Sbjct: 1276 DKIQDGSIITRHVSSAHQLADILTKPLGKEFFAPMIRKLGVQDIHSPT 1323



 Score = 37.0 bits (84), Expect(3) = 5e-75
 Identities = 18/36 (50%), Positives = 24/36 (66%)
 Frame = -3

Query: 1297 SRN*CILQMDVHNAFIQGDLIEKVYMNISQGFAGQG 1190
            +R   I QMDV+NAF+ GDL E++YM+   G   QG
Sbjct: 913  ARGWSIHQMDVNNAFLHGDLHEEIYMSPPLGLRRQG 948


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  247 bits (631), Expect(3) = 1e-74
 Identities = 147/344 (42%), Positives = 194/344 (56%), Gaps = 2/344 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            KVC+L KSLY LKQA RQW  KLT AL E  F Q   DY LFT                 
Sbjct: 944  KVCKLQKSLYGLKQASRQWFAKLTTALKEYGFQQSLADYSLFTYRRGNIVMNLLVYVDDL 1003

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            ++ GN  K+    +N L  KF +K+LG LK+ LGIE ++   G+ +SQRKY         
Sbjct: 1004 ILAGNDNKVCEAFKNFLDRKFGIKNLGQLKYILGIEVARGKDGLFLSQRKYALNIIKECG 1063

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMT 643
               A+P   P+E N         KL  A  +        +L DP  Y+RL+G L+YLT+T
Sbjct: 1064 LLGARPVEFPMEEN--------HKLALANGR--------LLNDPGMYRRLVGRLIYLTVT 1107

Query: 642  RIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG 463
            R D++Y V VLSQF   P+  H DAA RVVRY+K  PG G+++ + N  +L    DSDW 
Sbjct: 1108 RPDLTYXVHVLSQFMQSPREEHLDAAYRVVRYLKKGPGQGIVLKADNDLQLYCYSDSDWX 1167

Query: 462  VA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKEL 289
                    +    V  G + IS + KKQ T++RSSAE E+ SMA A +E+TWL  +   L
Sbjct: 1168 SCPLTRRSISGCCVKLGTSPISWRCKKQGTISRSSAEVEYXSMAMAASELTWLKSLLASL 1227

Query: 288  GVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFVEKKL 157
            GV  D P+ L+CD+KA + IA N +F+ERTK I+IDCHFV +K+
Sbjct: 1228 GVLHDKPMKLYCDNKAALHIAANPVFHERTKHIEIDCHFVREKV 1271



 Score = 42.4 bits (98), Expect(3) = 1e-74
 Identities = 20/45 (44%), Positives = 29/45 (64%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGFAGQG 1190
            V   LA+  ++   + QMDV+NAF+ GDL E+VYM + +GF   G
Sbjct: 897  VRCFLAVXVAKRWELHQMDVNNAFLHGDLEEEVYMKLPEGFKATG 941



 Score = 40.4 bits (93), Expect(3) = 1e-74
 Identities = 20/51 (39%), Positives = 31/51 (60%)
 Frame = -3

Query: 175  FCGEKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQPS 23
            F  EK+  G   T ++ +K Q AD+ TK LG+Q   +L SKL ++D+  P+
Sbjct: 1266 FVREKVQSGEIVTTYLPSKLQXADMFTKALGRQQFLFLSSKLGIRDLHAPT 1316


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  253 bits (646), Expect(3) = 2e-74
 Identities = 145/343 (42%), Positives = 196/343 (57%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRLHKSLY LKQA RQW  K + A+    + Q   DY LFT++               L
Sbjct: 1149 VCRLHKSLYGLKQASRQWFSKFSKAIQAAGYVQSRADYSLFTRIQGKSFTALLIYVDDIL 1208

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            +TGN    I   +  L  +F++KDLG LK+FLGIE S S  GI +SQRKY          
Sbjct: 1209 ITGNDSMSIAAIKKFLHSQFRLKDLGDLKYFLGIEVSSSKNGIFISQRKYALEIIKDAGL 1268

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMTR 640
              A P  TP+E  L  S    DK               +L DP  Y+RL+G L+YLT++R
Sbjct: 1269 LGAAPIDTPMERGLRLS----DK-------------SDLLKDPGHYRRLVGRLIYLTVSR 1311

Query: 639  IDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG- 463
             DI+Y V VLS+F HQP+  H +AALRVVRY+K +PG G+   S +  RL   CDSDW  
Sbjct: 1312 PDITYSVHVLSRFMHQPRKLHMEAALRVVRYLKNAPGQGLFFSSNSDFRLRAYCDSDWAG 1371

Query: 462  -VA*N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKELG 286
                      + V  G +++S +SK+Q TV+ SSAEAE+R+M  A  E+TWL  + ++LG
Sbjct: 1372 CPITRRSTTGYCVFLGPSLVSWRSKRQKTVSLSSAEAEYRAMTGACCELTWLRYLLRDLG 1431

Query: 285  VHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFVEKKL 157
            V    P  L+CD+KA + I  N +F+ERT+ I++DCH++  K+
Sbjct: 1432 VLHREPSLLYCDNKAALHITANPVFHERTRHIEMDCHYIRDKI 1474



 Score = 43.5 bits (101), Expect(3) = 2e-74
 Identities = 21/45 (46%), Positives = 31/45 (68%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGFAGQG 1190
            V  +LA+AA+R   + Q+DV+NAF+ GDL E++YM+   G   QG
Sbjct: 1100 VCCLLALAAARRWSLHQLDVNNAFLHGDLHEEIYMSPPPGLRRQG 1144



 Score = 32.3 bits (72), Expect(3) = 2e-74
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKL 50
            +KI  G   T  V++  Q+AD+LTK LGK+    ++ KL
Sbjct: 1472 DKIQDGSVATRFVNSAHQLADVLTKALGKEVFTPMIRKL 1510


>emb|CAN81026.1| hypothetical protein VITISV_023317 [Vitis vinifera]
          Length = 1158

 Score =  244 bits (624), Expect(3) = 3e-74
 Identities = 145/343 (42%), Positives = 190/343 (55%), Gaps = 2/343 (0%)
 Frame = -1

Query: 1179 VCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXXL 1000
            VCRLHKSLY LKQA RQW  K + A+    + Q   DY LFT+                L
Sbjct: 788  VCRLHKSLYGLKQASRQWFAKFSEAIQSAGYAQSRADYSLFTRKQGKSFTALLIYVDDIL 847

Query: 999  MTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXXX 820
            +TGN    I  T+ +L   F +KDLG LK+FLGIE S S  GI +SQRKY          
Sbjct: 848  ITGNDPVSIATTKKILHSHFHLKDLGDLKYFLGIEVSASKNGIFISQRKYALEIIEDAGL 907

Query: 819  XXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMTR 640
                P  TP+E  L  S    DK               +L D   Y RL+G L+YLTM+R
Sbjct: 908  LGTAPIDTPMERGLKLS----DK-------------SDLLKDQGXYXRLVGRLIYLTMSR 950

Query: 639  IDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG- 463
              I+Y V VLS+F HQP+ +H +AA RVVRY+K +PG G+   S N  RL   CDSDW  
Sbjct: 951  PYITYAVHVLSRFMHQPRKAHMEAAFRVVRYLKNAPGQGLFFSSNNDFRLRAYCDSDWAG 1010

Query: 462  -VA*N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKELG 286
                      + V  G ++IS +SK+Q TV+ SSAEAE+R+M  A  E+T L  + K+L 
Sbjct: 1011 CPLTRRSTTGYCVFLGPSLISWRSKRQKTVSLSSAEAEYRAMTGACCELTXLRYLLKDLS 1070

Query: 285  VHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFVEKKL 157
            V    PV L+CD+KA + IA N +F+E T+ I++DCH++  K+
Sbjct: 1071 VLHQEPVLLYCDNKAALHIAANPVFHEPTRHIEMDCHYIRDKV 1113



 Score = 45.1 bits (105), Expect(3) = 3e-74
 Identities = 23/45 (51%), Positives = 31/45 (68%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGFAGQG 1190
            V  +LA+AA+R   I QMDV+NAF+ GDL E++YM+   G   QG
Sbjct: 739  VRCLLALAAARGWSIHQMDVNNAFLHGDLHEEIYMSPPLGLRRQG 783



 Score = 38.9 bits (89), Expect(3) = 3e-74
 Identities = 19/48 (39%), Positives = 30/48 (62%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQPS 23
            +K+  G   T HVS+  Q+AD+LTK LG +    ++ KL ++DI  P+
Sbjct: 1111 DKVQDGSIITRHVSSAHQLADILTKPLGNEIFAPMIRKLGVQDIHSPT 1158


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  239 bits (610), Expect(3) = 1e-73
 Identities = 137/340 (40%), Positives = 198/340 (58%), Gaps = 2/340 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            KVCRLHKSLY LKQAPR W  KL+ AL +  FTQ   DY LF+                 
Sbjct: 737  KVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDL 796

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            +++G+C   + Q ++ L+  F MKDLG LK+FLGIE S++++G  +SQRKY         
Sbjct: 797  IISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMG 856

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMT 643
               A+P+  PLE N   S                +    +L D S+Y+RL+G L+YL +T
Sbjct: 857  LLGARPSAFPLEQNHKLS----------------LSTSPLLSDSSRYRRLVGRLIYLAVT 900

Query: 642  RIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG 463
            R ++SY V  L+QF   P+  H +AA+RVVRY+K +PG G+L+ S ++ ++   CDSD+ 
Sbjct: 901  RPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYA 960

Query: 462  VA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKEL 289
                    +  + V  G   IS K+KKQ TV+RSSAEAE+R+MA    E+ WL  V  +L
Sbjct: 961  ACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVLYDL 1020

Query: 288  GVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            GV     + +F DSK+ I +++N + +ERTK +++DCHF+
Sbjct: 1021 GVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFI 1060



 Score = 48.5 bits (114), Expect(3) = 1e-73
 Identities = 22/37 (59%), Positives = 29/37 (78%)
 Frame = -3

Query: 1312 LAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            L +AA+R+  + QMDVHNAF+ GDL E+VYM + QGF
Sbjct: 694  LGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGF 730



 Score = 38.9 bits (89), Expect(3) = 1e-73
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = -3

Query: 175  FCGEKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQPS 23
            F  + I+ G+  T  V + +Q+AD+LTK LG++   Y L KL + D+  P+
Sbjct: 1059 FIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGILDVHAPT 1109


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  239 bits (609), Expect(3) = 1e-73
 Identities = 136/340 (40%), Positives = 198/340 (58%), Gaps = 2/340 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            KVCRLHKSLY LKQAPR W  KL+ AL +  FTQ   DY LF+                 
Sbjct: 737  KVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGVFVHVLVYVDDL 796

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            +++G+C   + Q ++ L+  F MKDLG LK+FLGIE S++++G  +SQRKY         
Sbjct: 797  IISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMG 856

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMT 643
               A+P+  PLE N   S                +    +L D S+Y+RL+G L+YL +T
Sbjct: 857  LLGARPSAFPLEQNHKLS----------------LSTSPLLSDSSRYRRLVGRLIYLAVT 900

Query: 642  RIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG 463
            R ++SY V  L+QF   P+  H +AA+RVVRY+K +PG G+L+ S ++ ++   CDSD+ 
Sbjct: 901  RPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYA 960

Query: 462  VA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKEL 289
                    +  + V  G   IS K+KKQ T++RSSAEAE+R+MA    E+ WL  V  +L
Sbjct: 961  ACPLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAEAEYRAMAFLTQELMWLKRVLYDL 1020

Query: 288  GVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            GV     + +F DSK+ I +++N + +ERTK +++DCHF+
Sbjct: 1021 GVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFI 1060



 Score = 48.5 bits (114), Expect(3) = 1e-73
 Identities = 22/37 (59%), Positives = 29/37 (78%)
 Frame = -3

Query: 1312 LAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            L +AA+R+  + QMDVHNAF+ GDL E+VYM + QGF
Sbjct: 694  LGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGF 730



 Score = 38.9 bits (89), Expect(3) = 1e-73
 Identities = 19/51 (37%), Positives = 31/51 (60%)
 Frame = -3

Query: 175  FCGEKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQPS 23
            F  + I+ G+  T  V + +Q+AD+LTK LG++   Y L KL + D+  P+
Sbjct: 1059 FIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGILDVHAPT 1109


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score =  242 bits (618), Expect(3) = 2e-73
 Identities = 146/341 (42%), Positives = 193/341 (56%), Gaps = 3/341 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            KVCRL KSLY LKQAPR W  KL+ AL  + FTQ + DY LF+                 
Sbjct: 1124 KVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDL 1183

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            ++ GN    I + ++ L   F MKDLG LK+FLG+E S+   G  +SQRKY         
Sbjct: 1184 IVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIVKETG 1243

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDG-VLVDPSQYQRLIGILLYLTM 646
                KP+  P+  N                  KL  I G V  +P QY+RL+G  +YLT+
Sbjct: 1244 LLGCKPSAVPIALN-----------------HKLASITGPVFTNPEQYRRLVGRFIYLTI 1286

Query: 645  TRIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDW 466
            TR D+SY V +LSQF   P  +H +AALR+VRY+KGSP  G+ + S +S  +   CDSD+
Sbjct: 1287 TRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDY 1346

Query: 465  GVA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKE 292
                     +  +VV  G + IS K+KKQ TV+ SSAEAE+R+MA  + E+ WL  + K+
Sbjct: 1347 NACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKD 1406

Query: 291  LGVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            LGVH   P+ L CDS+A I IA N +F+ERTK I+ DCH V
Sbjct: 1407 LGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDCHKV 1447



 Score = 48.9 bits (115), Expect(3) = 2e-73
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            V ++LA+AA+++  + QMDVHNAF+ GDL E+VYM +  GF
Sbjct: 1077 VRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGF 1117



 Score = 34.7 bits (78), Expect(3) = 2e-73
 Identities = 17/43 (39%), Positives = 28/43 (65%)
 Frame = -3

Query: 166  EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKD 38
            + ++  +  T H+ T++QVADLLTK+L +   + LLS L + D
Sbjct: 1449 DAVLDKLITTEHIYTEDQVADLLTKSLPRPTFERLLSTLGVTD 1491


>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
          Length = 1468

 Score =  239 bits (609), Expect(3) = 2e-73
 Identities = 137/340 (40%), Positives = 198/340 (58%), Gaps = 2/340 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            KVCRLHKSLY LKQAPR W  KL+ AL +  FTQ   DY LF+                 
Sbjct: 1096 KVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNNDGIFVHVLVYVDDL 1155

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            +++G+C   + Q ++ L+  F MKDLG LK+FLGIE S++++G  +SQRKY         
Sbjct: 1156 IISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMG 1215

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDGVLVDPSQYQRLIGILLYLTMT 643
               A+P+  PLE N   S                +    +L D S+Y+RL+G L+YL +T
Sbjct: 1216 LLGARPSAFPLEQNHKLS----------------LSTSPLLSDSSRYRRLVGRLIYLVVT 1259

Query: 642  RIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDWG 463
            R ++SY V  L+QF   P+  H +AA+RVVRY+K +PG G+L+ S ++ ++   CDSD+ 
Sbjct: 1260 RPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYA 1319

Query: 462  VA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKEL 289
                    +  + V  G   IS K+KKQ TV+RSSAEAE+R+MA    E+ WL  V  +L
Sbjct: 1320 ACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVLYDL 1379

Query: 288  GVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            GV     + +F DSK+ I +++N + +ERTK +++DCHF+
Sbjct: 1380 GVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFI 1419



 Score = 48.5 bits (114), Expect(3) = 2e-73
 Identities = 22/37 (59%), Positives = 29/37 (78%)
 Frame = -3

Query: 1312 LAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            L +AA+R+  + QMDVHNAF+ GDL E+VYM + QGF
Sbjct: 1053 LGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGF 1089



 Score = 38.5 bits (88), Expect(3) = 2e-73
 Identities = 19/50 (38%), Positives = 30/50 (60%)
 Frame = -3

Query: 175  FCGEKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKDIFQP 26
            F  + I+ G+  T  V + +Q+AD+LTK LG++   Y L KL + D+  P
Sbjct: 1418 FIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGILDVHAP 1467


>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
            At2g23330 [Arabidopsis thaliana]
            gi|110742535|dbj|BAE99183.1| putative retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 776

 Score =  242 bits (618), Expect(3) = 2e-73
 Identities = 146/341 (42%), Positives = 193/341 (56%), Gaps = 3/341 (0%)
 Frame = -1

Query: 1182 KVCRLHKSLYELKQAPRQWNKKLTGALVELRFTQCHFDYFLFTKVVKTEXXXXXXXXXXX 1003
            KVCRL KSLY LKQAPR W  KL+ AL  + FTQ + DY LF+                 
Sbjct: 404  KVCRLRKSLYGLKQAPRCWFSKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDL 463

Query: 1002 LMTGNC*KLILQTRNVLQLKFKMKDLGALKFFLGIEFSKSSKGIVMSQRKYXXXXXXXXX 823
            ++ GN    I + ++ L   F MKDLG LK+FLG+E S+   G  +SQRKY         
Sbjct: 464  IVAGNNLDAIDRFKSQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIVKETG 523

Query: 822  XXXAKPAGTPLEPNLNFSYVEFDKLVQAEAKSKLVPIDG-VLVDPSQYQRLIGILLYLTM 646
                KP+  P+  N                  KL  I G V  +P QY+RL+G  +YLT+
Sbjct: 524  LLGCKPSAVPIALN-----------------HKLASITGPVFTNPEQYRRLVGRFIYLTI 566

Query: 645  TRIDISYVVQVLSQFKHQPKHSHRDAALRVVRYIKGSPGLGVLMPSMNSERLEVSCDSDW 466
            TR D+SY V +LSQF   P  +H +AALR+VRY+KGSP  G+ + S +S  +   CDSD+
Sbjct: 567  TRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRSDSSLIINAYCDSDY 626

Query: 465  GVA*--N*GVCHWVVTFGRAIIS*KSKKQATVARSSAEAEFRSMASAVAEVTWLLGVFKE 292
                     +  +VV  G + IS K+KKQ TV+ SSAEAE+R+MA  + E+ WL  + K+
Sbjct: 627  NACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAYTLKELKWLKALLKD 686

Query: 291  LGVHLDLPVHLFCDSKAVIQIAINLIFYERTKRIDIDCHFV 169
            LGVH   P+ L CDS+A I IA N +F+ERTK I+ DCH V
Sbjct: 687  LGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDCHKV 727



 Score = 48.9 bits (115), Expect(3) = 2e-73
 Identities = 22/41 (53%), Positives = 32/41 (78%)
 Frame = -3

Query: 1324 VMSVLAIAASRN*CILQMDVHNAFIQGDLIEKVYMNISQGF 1202
            V ++LA+AA+++  + QMDVHNAF+ GDL E+VYM +  GF
Sbjct: 357  VRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGF 397



 Score = 34.7 bits (78), Expect(3) = 2e-73
 Identities = 17/43 (39%), Positives = 28/43 (65%)
 Frame = -3

Query: 166 EKIMQGVTKTLHVSTKEQVADLLTKNLGKQPHDYLLSKLLLKD 38
           + ++  +  T H+ T++QVADLLTK+L +   + LLS L + D
Sbjct: 729 DAVLDKLITTEHIYTEDQVADLLTKSLPRPTFERLLSTLGVTD 771