BLASTX nr result

ID: Atropa21_contig00023974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00023974
         (1211 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]         107   8e-21
ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578...    82   2e-20
ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily membe...    62   3e-09
ref|XP_006361065.1| PREDICTED: putative NPIP-like protein LOC613...    47   1e-07

>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score =  107 bits (268), Expect = 8e-21
 Identities = 53/113 (46%), Positives = 71/113 (62%)
 Frame = +2

Query: 8   VTWKSLEVKQLIIKENLQYPILGKFSYDNSDIKELRQAIPIQCEIKGPCTXXXXXXXXXX 187
           +TW   E ++L +++NLQY ++ KFSY   D+ ELR+AIPIQ EIKGPC           
Sbjct: 8   ITWTKKEFEKLTVRQNLQYAVVAKFSYGRPDLYELRKAIPIQLEIKGPCNIGFLEERHIL 67

Query: 188 XXXNFLEDYIKMMSTPAYYLEVHDKY*QMRTLIWDSGFKPEKETLIAVAWISF 346
              + LEDY  +MS  A+ L V ++Y  +R L WD  F PE+ET IA+AWISF
Sbjct: 68  IRLSLLEDYATLMS-KAWELRVRNRYFPLRFLKWDPWFNPEEETTIAIAWISF 119


>ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578882, partial [Solanum
           tuberosum]
          Length = 606

 Score = 81.6 bits (200), Expect(2) = 2e-20
 Identities = 41/93 (44%), Positives = 55/93 (59%)
 Frame = +2

Query: 68  ILGKFSYDNSDIKELRQAIPIQCEIKGPCTXXXXXXXXXXXXXNFLEDYIKMMSTPAYYL 247
           ++GKFSY   DI +LR+ IP QCE+KG                + LEDY+K++S P +Y+
Sbjct: 44  MIGKFSYGWPDILDLRKLIPKQCELKGEVDIGLLCNRYVLIRASLLEDYVKLLSKPQFYI 103

Query: 248 EVHDKY*QMRTLIWDSGFKPEKETLIAVAWISF 346
             +     MRTL WD  F PE+ET  A+AWISF
Sbjct: 104 THNHWSYPMRTLKWDPLFDPEEETTTAIAWISF 136



 Score = 45.4 bits (106), Expect(2) = 2e-20
 Identities = 22/45 (48%), Positives = 30/45 (66%)
 Frame = +1

Query: 343 FPDLPLNFFVKEAMFSLAVVAAVGKSLTIDTVTTNRMRLSCVKVK 477
           FP LP NFF KE +FS+A  AAVG+ L +D  T N+ + SC + +
Sbjct: 136 FPSLPPNFFGKETIFSMA--AAVGRPLQVDLATQNKTKPSCARTE 178


>ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily member 4-like [Solanum
           tuberosum]
          Length = 1068

 Score = 62.0 bits (149), Expect(2) = 3e-09
 Identities = 31/56 (55%), Positives = 40/56 (71%)
 Frame = +1

Query: 343 FPDLPLNFFVKEAMFSLAVVAAVGKSLTIDTVTTNRMRLSCVKVKVEIDLISEHPQ 510
           FP LP NFF +E +FSLAV  AVGK L +D  T N+ R SC ++KVE+DL+ E P+
Sbjct: 17  FPALPPNFFGREVVFSLAV--AVGKPLQVDMATRNQTRPSCARMKVEVDLLGEFPK 70



 Score = 27.3 bits (59), Expect(2) = 3e-09
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 299 FKPEKETLIAVAWISF 346
           F PE++T  A+AWISF
Sbjct: 2   FNPEEKTTTAIAWISF 17


>ref|XP_006361065.1| PREDICTED: putative NPIP-like protein LOC613037-like [Solanum
           tuberosum]
          Length = 499

 Score = 47.0 bits (110), Expect(2) = 1e-07
 Identities = 23/56 (41%), Positives = 37/56 (66%)
 Frame = +1

Query: 343 FPDLPLNFFVKEAMFSLAVVAAVGKSLTIDTVTTNRMRLSCVKVKVEIDLISEHPQ 510
           FP LP  +F + A+FS+A  +AVG+ L +D  T ++ R S  +VKVE++L+   P+
Sbjct: 6   FPSLPCQYFARNALFSMA--SAVGQPLDVDRATYDKTRPSTARVKVEVNLLRILPK 59



 Score = 36.6 bits (83), Expect(2) = 1e-07
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 509 RVHIPDEDEVKGAVKVKWIKIKYDYLSKYYKHCKLQEHKKS 631
           R+ +   + V G +   W KI+YDY+  Y K CK Q H+++
Sbjct: 60  RIRVQFNNLVTGEITNVWQKIRYDYVPYYCKRCKHQGHREA 100


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