BLASTX nr result
ID: Atropa21_contig00023957
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00023957
(843 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243... 134 8e-30
ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245... 130 8e-29
ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255... 129 2e-28
ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259... 127 3e-28
ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248... 127 6e-28
dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x ... 123 8e-28
ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260... 127 4e-27
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 123 7e-27
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis... 119 1e-26
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 119 2e-26
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 123 3e-26
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 123 3e-26
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 123 3e-26
ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259... 118 6e-26
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 121 8e-26
emb|CAB10526.1| retrotransposon like protein [Arabidopsis thalia... 120 8e-26
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 121 8e-26
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 122 1e-25
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 120 1e-25
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 120 2e-25
>ref|XP_004235138.1| PREDICTED: uncharacterized protein LOC101243773 [Solanum
lycopersicum]
Length = 957
Score = 134 bits (336), Expect(2) = 8e-30
Identities = 67/119 (56%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K K+LL+T RSLLFQSKLP++YWGEC+LTATY INR P+ LL N +PY +LY P YS+
Sbjct: 762 KHKYLLETARSLLFQSKLPLRYWGECVLTATYIINRLPTKLLQNKSPYEILYLKQPTYSH 821
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQE 425
LKSFG L F V K + DKF+ R+I +F+GY K YK+L++ V SRDV F E
Sbjct: 822 LKSFGCLCFPTVLKTHKDKFEPRTIPHIFVGYPFNTKGYKVLNLATKKVHISRDVVFHE 880
Score = 23.9 bits (50), Expect(2) = 8e-30
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H + ++PQQN VVERK
Sbjct: 745 HQKTCPYTPQQNGVVERK 762
>ref|XP_004231364.1| PREDICTED: uncharacterized protein LOC101245809 [Solanum
lycopersicum]
Length = 1094
Score = 130 bits (327), Expect(2) = 8e-29
Identities = 66/121 (54%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K KHLL+T R+LLFQSKLPVKYWGECIL ATY INR PS +LN PY +LY PLYS+
Sbjct: 693 KHKHLLETARALLFQSKLPVKYWGECILCATYIINRLPSTVLNQKCPYEVLYFRKPLYSH 752
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
++SFG L + VP P+ KF+ R+ +F+GY K YK+L M + RDV F E
Sbjct: 753 MRSFGCLCYPTVPIPHRAKFEPRTTPHIFIGYPHETKGYKVLSMSTGKIHVCRDVIFHEN 812
Query: 429 V 431
V
Sbjct: 813 V 813
Score = 23.9 bits (50), Expect(2) = 8e-29
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H + ++PQQN VVERK
Sbjct: 676 HQKTCPYTPQQNGVVERK 693
>ref|XP_004228785.1| PREDICTED: uncharacterized protein LOC101255821 [Solanum
lycopersicum]
Length = 1125
Score = 129 bits (324), Expect(2) = 2e-28
Identities = 66/119 (55%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K K+LL+T R+LLFQSKLP++YWGEC+LTA Y INR P+ LL N +PY LY P YS+
Sbjct: 769 KHKYLLETARALLFQSKLPLRYWGECVLTAIYIINRLPTKLLQNKSPYETLYLKQPTYSH 828
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQE 425
LKSFG L F V K + DKF+ R I VF+GY K YK+L++ V SRDV F E
Sbjct: 829 LKSFGCLCFPTVLKTHKDKFEPRGIPHVFVGYPFNTKGYKVLNLATKKVHISRDVVFHE 887
Score = 23.9 bits (50), Expect(2) = 2e-28
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H + ++PQQN VVERK
Sbjct: 752 HQKTCPYTPQQNGVVERK 769
>ref|XP_004252107.1| PREDICTED: uncharacterized protein LOC101259219 [Solanum
lycopersicum]
Length = 986
Score = 127 bits (319), Expect(2) = 3e-28
Identities = 61/121 (50%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K K+LL+T R+LLFQSKLP++YWGEC+LTATY INR P+ LL +PY LLY+ P YS+
Sbjct: 763 KHKYLLETARALLFQSKLPMRYWGECVLTATYLINRLPTKLLQGKSPYELLYQKKPFYSH 822
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
LK+FG L F K + +KF+ R++ +F+GY K YK+L++ + RDV F ET
Sbjct: 823 LKNFGCLCFPTTLKTHKEKFEPRTVPHIFIGYPFNTKGYKVLNLATKRIHVFRDVFFYET 882
Query: 429 V 431
+
Sbjct: 883 I 883
Score = 25.0 bits (53), Expect(2) = 3e-28
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H S ++PQQN VVERK
Sbjct: 746 HQKSCPYTPQQNGVVERK 763
>ref|XP_004240277.1| PREDICTED: uncharacterized protein LOC101248781 [Solanum
lycopersicum]
Length = 729
Score = 127 bits (320), Expect(3) = 6e-28
Identities = 62/121 (51%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K K+LL+T R+LLFQSK+PV+YWGE +LTATY INR P+ LL +PY LLY+ P YS+
Sbjct: 420 KHKYLLETARALLFQSKIPVRYWGEYVLTATYLINRLPTKLLPGKSPYELLYQKKPFYSH 479
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
LK+FG L F K + DKF+ R++ +F+GY K YK+L++ + SRDV F ET
Sbjct: 480 LKNFGCLCFPTTLKTHKDKFEPRTVPHIFIGYPFNTKGYKVLNLATKRIHVSRDVSFYET 539
Query: 429 V 431
+
Sbjct: 540 I 540
Score = 22.7 bits (47), Expect(3) = 6e-28
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H S ++PQQN VVE K
Sbjct: 403 HQKSCPYTPQQNGVVEMK 420
Score = 21.2 bits (43), Expect(3) = 6e-28
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +2
Query: 5 FFSSQGIIHQTS 40
FF +GIIHQ S
Sbjct: 395 FFQEKGIIHQKS 406
>dbj|BAD99220.1| polypeptide with an integrase domain [Petunia x hybrida]
Length = 492
Score = 123 bits (309), Expect(3) = 8e-28
Identities = 62/121 (51%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K +HLL+T R+LL+QS LP K+WG+C+LTATY INRFPS +LN PY +L+ + P YS+
Sbjct: 178 KHRHLLETCRALLYQSHLPKKFWGDCLLTATYLINRFPSKVLNGKCPYQVLFGSLPDYSH 237
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
LKSFG L F + + DK R+I VFLGY +K YK+L++ V SRDV+F E+
Sbjct: 238 LKSFGSLCFVSTLTRHRDKLMPRAIPGVFLGYPFAQKGYKVLNLQTSQVIVSRDVKFFES 297
Query: 429 V 431
+
Sbjct: 298 I 298
Score = 26.9 bits (58), Expect(3) = 8e-28
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H T+ + +PQQN VVERK
Sbjct: 161 HQTTCVGTPQQNGVVERK 178
Score = 20.8 bits (42), Expect(3) = 8e-28
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 5 FFSSQGIIHQTS 40
F +S GIIHQT+
Sbjct: 153 FLASLGIIHQTT 164
>ref|XP_004252168.1| PREDICTED: uncharacterized protein LOC101260907 [Solanum
lycopersicum]
Length = 924
Score = 127 bits (320), Expect = 4e-27
Identities = 62/121 (51%), Positives = 84/121 (69%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K K+LL+T R+LLFQSK+P++YW EC+LTATY INR P+ LL +PY LLY+ P YS+
Sbjct: 598 KHKYLLETARALLFQSKMPMRYWVECVLTATYLINRLPTKLLQGKSPYELLYQKKPFYSH 657
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
L++FG L F K + DKF+ R++ +F+GY K YK+L+ D + SRDV F ET
Sbjct: 658 LRNFGCLCFPTTLKTHKDKFEPRTMPHIFIGYPFNTKGYKVLNWDTKRIHVSRDVLFYET 717
Query: 429 V 431
V
Sbjct: 718 V 718
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 123 bits (309), Expect(2) = 7e-27
Identities = 59/119 (49%), Positives = 82/119 (68%), Gaps = 1/119 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K +H+L R+LLFQS++P+ YWG+CILTA + INR PSP+++N T + +L K P Y++
Sbjct: 694 KHQHILNVARALLFQSQIPLSYWGDCILTAVFIINRTPSPVISNKTLFEMLTKKVPDYTH 753
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQE 425
LKSFG L +A+ KF+ R+ TC FLGY K YKLLD++ H +F SR+V F E
Sbjct: 754 LKSFGCLCYASTSPKQRHKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYE 812
Score = 24.3 bits (51), Expect(2) = 7e-27
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 25 YTSNIHSPQQNSVVERK 75
Y S +P+QNSVVERK
Sbjct: 678 YHSCPETPEQNSVVERK 694
>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
gi|7268152|emb|CAB78488.1| retrovirus-related like
polyprotein [Arabidopsis thaliana]
Length = 1489
Score = 119 bits (297), Expect(2) = 1e-26
Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K +H+L R+LLFQS +P++YW +C+ TA + INR PSPLLNN +PY L+ P YS
Sbjct: 737 KHQHILNVARALLFQSNIPMQYWSDCVTTAVFLINRLPSPLLNNKSPYELILNKQPDYSL 796
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
LK+FG L F + KF R+ CVFLGY K YK+LD++ H V SR+V F+E
Sbjct: 797 LKNFGCLCFVSTNAHERTKFTPRARACVFLGYPSGYKGYKVLDLESHSVTVSRNVVFKEH 856
Query: 429 V 431
V
Sbjct: 857 V 857
Score = 28.1 bits (61), Expect(2) = 1e-26
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H+ S ++PQQNSVVERK
Sbjct: 720 HHFSCAYTPQQNSVVERK 737
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 119 bits (297), Expect(3) = 2e-26
Identities = 60/121 (49%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K +H+L R+ LFQ LPVK+WGE ILTAT+ INR PS +L TPY LL+ P Y
Sbjct: 662 KHRHILNVARACLFQGNLPVKFWGESILTATHLINRTPSAVLKGKTPYELLFGERPSYDM 721
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
L+SFG L +A + DKF SRS CVF+GY KKA+++ D++ +F SRDV+F E
Sbjct: 722 LRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFASRDVRFHED 781
Query: 429 V 431
+
Sbjct: 782 I 782
Score = 25.8 bits (55), Expect(3) = 2e-26
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H TS + +PQQN VERK
Sbjct: 645 HQTSCVDTPQQNGRVERK 662
Score = 21.6 bits (44), Expect(3) = 2e-26
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 5 FFSSQGIIHQTS 40
+F + GI+HQTS
Sbjct: 637 YFQTHGILHQTS 648
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 123 bits (308), Expect(2) = 3e-26
Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K KH+L R+L FQ+ LP+ +WGE +L A + INR PSPLL+N TP+ +L+ T P Y+
Sbjct: 386 KHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAA 445
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
+ +FG LSFA K DKF SRS CVFLGY KK +KL D+D +F SRDV+F E
Sbjct: 446 IHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFED 505
Query: 429 V 431
V
Sbjct: 506 V 506
Score = 22.7 bits (47), Expect(2) = 3e-26
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 28 TSNIHSPQQNSVVERK 75
TS + +PQQN VERK
Sbjct: 371 TSCVGTPQQNGRVERK 386
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 123 bits (308), Expect(2) = 3e-26
Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K KH+L R+L FQ+ LP+ +WGE +L A + INR PSPLL+N TP+ +L+ T P Y+
Sbjct: 427 KHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAA 486
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
+ +FG LSFA K DKF SRS CVFLGY KK +KL D+D +F SRDV+F E
Sbjct: 487 IHTFGCLSFAHDXKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFED 546
Query: 429 V 431
V
Sbjct: 547 V 547
Score = 22.7 bits (47), Expect(2) = 3e-26
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 28 TSNIHSPQQNSVVERK 75
TS + +PQQN VERK
Sbjct: 412 TSCVGTPQQNGRVERK 427
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 123 bits (308), Expect(2) = 3e-26
Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K KH+L R+L FQ+ LP+ +WGE +L A + INR PSPLL+N TP+ +L+ T P Y+
Sbjct: 341 KHKHILNVGRALRFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAA 400
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
+ +FG LSFA K DKF SRS CVFLGY KK +KL D+D +F SRDV+F E
Sbjct: 401 IHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFED 460
Query: 429 V 431
V
Sbjct: 461 V 461
Score = 22.7 bits (47), Expect(2) = 3e-26
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 28 TSNIHSPQQNSVVERK 75
TS + +PQQN VERK
Sbjct: 326 TSCVGTPQQNGRVERK 341
>ref|XP_004239452.1| PREDICTED: uncharacterized protein LOC101259633 [Solanum
lycopersicum]
Length = 1105
Score = 118 bits (296), Expect(2) = 6e-26
Identities = 60/121 (49%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K ++LL+T R+LLFQSKLP KYWG+CILT+TY INR PS L N PY +LYK P YS
Sbjct: 758 KHRYLLETARALLFQSKLPTKYWGDCILTSTYLINRIPSTFLQNKCPYEMLYKEKPKYSQ 817
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
L+SFG L + +PK + DK R+ +F+GY K YK++ + + SRDV F E
Sbjct: 818 LRSFGCLCYPTLPKVHRDKL-PRTTPHIFIGYPSGIKGYKVMSLATSKIQISRDVIFHED 876
Query: 429 V 431
+
Sbjct: 877 I 877
Score = 26.2 bits (56), Expect(2) = 6e-26
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H S ++PQQNS+VERK
Sbjct: 741 HQKSCPYTPQQNSIVERK 758
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 121 bits (303), Expect(2) = 8e-26
Identities = 61/120 (50%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Frame = +3
Query: 72 KTKHLLK-TRSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K +H+L R+L FQS LP+++WGECIL+A Y INR PS LL +PY +LYKT P YS+
Sbjct: 676 KHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSH 735
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
L+ FG L +A DKF +RS CVF+GY +K ++L D+++ F SRDV FQET
Sbjct: 736 LRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQET 795
Score = 23.1 bits (48), Expect(2) = 8e-26
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H TS + +P QN VERK
Sbjct: 659 HETSCVGTPHQNGRVERK 676
>emb|CAB10526.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268497|emb|CAB78748.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1433
Score = 120 bits (300), Expect(2) = 8e-26
Identities = 56/121 (46%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K +H+L R+LLFQS +P+++WG+C+LTA + INR P+P+LNN +PY L P Y +
Sbjct: 704 KHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSPYEKLKNIPPAYES 763
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
LK+FG L +++ KF+ R+ CVFLGY + K YKLLD++ H V SR V F E
Sbjct: 764 LKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETHAVSISRHVIFHED 823
Query: 429 V 431
+
Sbjct: 824 I 824
Score = 24.3 bits (51), Expect(2) = 8e-26
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 25 YTSNIHSPQQNSVVERK 75
Y S +P+QNSVVERK
Sbjct: 688 YHSCPETPEQNSVVERK 704
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 121 bits (303), Expect(2) = 8e-26
Identities = 61/120 (50%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Frame = +3
Query: 72 KTKHLLK-TRSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K +H+L R+L FQS LP+++WGECIL+A Y INR PS LL +PY +LYKT P YS+
Sbjct: 452 KHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSH 511
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
L+ FG L +A DKF +RS CVF+GY +K ++L D+++ F SRDV FQET
Sbjct: 512 LRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQET 571
Score = 23.1 bits (48), Expect(2) = 8e-26
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H TS + +P QN VERK
Sbjct: 435 HETSCVGTPHQNGRVERK 452
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 122 bits (307), Expect = 1e-25
Identities = 63/121 (52%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K KH+L R+L FQ+ LP+ +WGE +L A + INR PSPLL+N TP+ +L+ T P Y+
Sbjct: 674 KHKHILNVGRALHFQANLPIYFWGESVLAAAHLINRTPSPLLHNKTPFEILFGTPPSYAA 733
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
+ +FG LSFA K DKF SRS CVFLGY KK +KL D+D +F SRDV+F E
Sbjct: 734 IHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFVSRDVKFFED 793
Query: 429 V 431
V
Sbjct: 794 V 794
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 120 bits (301), Expect(2) = 1e-25
Identities = 61/120 (50%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Frame = +3
Query: 72 KTKHLLK-TRSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K +H+L R+L FQS LP+++WGECIL+A Y INR PS LL +PY +LYKT P YS+
Sbjct: 452 KHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPNYSH 511
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
L+ FG L +A DKF +RS CVF+GY +K ++L D+++ F SRDV FQET
Sbjct: 512 LRVFGSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQET 571
Score = 23.1 bits (48), Expect(2) = 1e-25
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 22 HYTSNIHSPQQNSVVERK 75
H TS + +P QN VERK
Sbjct: 435 HETSCVGTPHQNGRVERK 452
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 120 bits (300), Expect(2) = 2e-25
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 1/121 (0%)
Frame = +3
Query: 72 KTKHLLKT-RSLLFQSKLPVKYWGECILTATYFINRFPSPLLNNSTPYSLLYKTNPLYSN 248
K +H+L R+L+FQS++P+ WG+C+LTA + INR PS LL N TPY +L T P+Y
Sbjct: 718 KHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVYEQ 777
Query: 249 LKSFGYLSFAAVPKPYIDKFKSRSITCVFLGYVMTKKAYKLLDMDKHVVFFSRDVQFQET 428
L++FG L +++ KF+ RS C+FLGY K YKL+D++ + VF SR+VQF E
Sbjct: 778 LRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFHEE 837
Query: 429 V 431
V
Sbjct: 838 V 838
Score = 23.1 bits (48), Expect(2) = 2e-25
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1
Query: 43 SPQQNSVVERK 75
+P+QNSVVERK
Sbjct: 708 TPEQNSVVERK 718