BLASTX nr result

ID: Atropa21_contig00023669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00023669
         (581 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250274.1| PREDICTED: U-box domain-containing protein 4...    55   1e-05

>ref|XP_004250274.1| PREDICTED: U-box domain-containing protein 4-like [Solanum
           lycopersicum]
          Length = 459

 Score = 55.5 bits (132), Expect = 1e-05
 Identities = 49/112 (43%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
 Frame = +3

Query: 276 SCSISENLTDSII-----ELSKKPQGTHKSSSSTCTHNNEEEDISTFLQLXXXXXXXXXX 440
           S +ISEN+TDS+I     EL+KKP   +K SSS       +ED   +LQL          
Sbjct: 63  SGAISENMTDSVIDIRLGELAKKPPVNNKGSSS-------DED---YLQLSQAFSDFSAC 112

Query: 441 XXXXXXGELQRLANV--QDPSLTRXXXXXXXXX---CLGFLDREKFSTEIIE 581
                 GELQRLA+V   D  LT+            CLGFL+REKFSTEIIE
Sbjct: 113 SSDIS-GELQRLASVPVSDLVLTQNPNSKPEPEPEPCLGFLEREKFSTEIIE 163


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